Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_B01
         (889 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   9.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.4  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 17/78 (21%), Positives = 23/78 (29%)
 Frame = +2

Query: 245 LLWXPXGXKPXNXXGGXXXIFXXKXFNPGGPKXXPXNXXXXXXXXXXXXXXAPGAPPVXX 424
           ++  P   +P N  GG       +  N  G    P                APG PP   
Sbjct: 259 MMGQPPPIRPPNPMGGPRPQISPQNSNLSG--GMPSGMVGPPRPPMPMQGGAPGGPPQGM 316

Query: 425 KXXFLXKKXXPPXXXXPP 478
           +  F  +    P    PP
Sbjct: 317 RPNFYNRPMGDPQTSRPP 334


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 9/22 (40%), Positives = 9/22 (40%)
 Frame = +2

Query: 791 PXPPPPXXGGGXXXXXXXXPPP 856
           P PPPP  G          PPP
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPP 551



 Score = 23.4 bits (48), Expect = 9.4
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +2

Query: 797 PPPPXXGGGXXXXXXXXPPPP 859
           PPPP  GG          PPP
Sbjct: 531 PPPPPPGGAVLNIPPQFLPPP 551


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -2

Query: 861 GGGGGXXXXXXXXPPPXXGGGGXG 790
           GGGGG        P P  GGGG G
Sbjct: 213 GGGGGSSGG----PGPGGGGGGGG 232


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,821
Number of Sequences: 2352
Number of extensions: 8867
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)