Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_B01
(889 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 40 0.003
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 40 0.003
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 40 0.003
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 0.035
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 0.035
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 36 0.051
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.16
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.16
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.27
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.27
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.28
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 32 0.48
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 1.5
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 1.5
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 31 1.5
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 1.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 25 3.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.4
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 29 5.9
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/81 (28%), Positives = 25/81 (30%), Gaps = 3/81 (3%)
Frame = +2
Query: 434 FLXKKXXPPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKKPPP---PPXXX 604
F K+ PP PPPPP G P P PPP PP
Sbjct: 225 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Query: 605 XGXTXXPXHXXXXXXXPPPXG 667
G + P PPP G
Sbjct: 285 AGGSPPPPRAGSPPPPPPPRG 305
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = +2
Query: 455 PPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKKPPPPPXXXXGXTXXPXHX 634
PP PPPP P G P P PPPPP P
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP--P 314
Query: 635 XXXXXXPPPXG 667
PPP G
Sbjct: 315 PQAGGSPPPAG 325
Score = 32.3 bits (70), Expect = 0.48
Identities = 24/87 (27%), Positives = 24/87 (27%), Gaps = 2/87 (2%)
Frame = +2
Query: 407 APPVXXKXXFLXKKXXPPXXXX--PPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKK 580
APP K PP PPPPP P G PP P
Sbjct: 231 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG--S 288
Query: 581 PPPPPXXXXGXTXXPXHXXXXXXXPPP 661
PPPP P PPP
Sbjct: 289 PPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 797 PPPPXXGGGXXXXXXXXPPPPP 862
PPPP GG PPPPP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPP 301
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/81 (28%), Positives = 25/81 (30%), Gaps = 3/81 (3%)
Frame = +2
Query: 434 FLXKKXXPPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKKPPP---PPXXX 604
F K+ PP PPPPP G P P PPP PP
Sbjct: 246 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Query: 605 XGXTXXPXHXXXXXXXPPPXG 667
G + P PPP G
Sbjct: 306 AGGSPPPPRAGSPPPPPPPRG 326
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = +2
Query: 455 PPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKKPPPPPXXXXGXTXXPXHX 634
PP PPPP P G P P PPPPP P
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP--P 335
Query: 635 XXXXXXPPPXG 667
PPP G
Sbjct: 336 PQAGGSPPPAG 346
Score = 32.3 bits (70), Expect = 0.48
Identities = 24/87 (27%), Positives = 24/87 (27%), Gaps = 2/87 (2%)
Frame = +2
Query: 407 APPVXXKXXFLXKKXXPPXXXX--PPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKK 580
APP K PP PPPPP P G PP P
Sbjct: 252 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG--S 309
Query: 581 PPPPPXXXXGXTXXPXHXXXXXXXPPP 661
PPPP P PPP
Sbjct: 310 PPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 797 PPPPXXGGGXXXXXXXXPPPPP 862
PPPP GG PPPPP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPP 322
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/81 (28%), Positives = 25/81 (30%), Gaps = 3/81 (3%)
Frame = +2
Query: 434 FLXKKXXPPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKKPPP---PPXXX 604
F K+ PP PPPPP G P P PPP PP
Sbjct: 231 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Query: 605 XGXTXXPXHXXXXXXXPPPXG 667
G + P PPP G
Sbjct: 291 AGGSPPPPRAGSPPPPPPPRG 311
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = +2
Query: 455 PPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKKPPPPPXXXXGXTXXPXHX 634
PP PPPP P G P P PPPPP P
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP--P 320
Query: 635 XXXXXXPPPXG 667
PPP G
Sbjct: 321 PQAGGSPPPAG 331
Score = 32.3 bits (70), Expect = 0.48
Identities = 24/87 (27%), Positives = 24/87 (27%), Gaps = 2/87 (2%)
Frame = +2
Query: 407 APPVXXKXXFLXKKXXPPXXXX--PPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKK 580
APP K PP PPPPP P G PP P
Sbjct: 237 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG--S 294
Query: 581 PPPPPXXXXGXTXXPXHXXXXXXXPPP 661
PPPP P PPP
Sbjct: 295 PPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 797 PPPPXXGGGXXXXXXXXPPPPP 862
PPPP GG PPPPP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPP 307
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.3 bits (65), Expect(2) = 0.035
Identities = 21/89 (23%), Positives = 23/89 (25%)
Frame = +2
Query: 401 PGAPPVXXKXXFLXKKXXPPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKK 580
P APP + + P PPPP P P
Sbjct: 555 PAAPPPPTR---VESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPP 611
Query: 581 PPPPPXXXXGXTXXPXHXXXXXXXPPPXG 667
PPPPP G PPP G
Sbjct: 612 PPPPPPQSFGMAPISSAAPPPPPPPPPMG 640
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 791 PXPPPPXXGGGXXXXXXXXPPPPP 862
P PPPP G PPPPP
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPP 634
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 790 PXPPPPXXXGGXXXXXXXXXPPPPP 864
P PPPP G PPPPP
Sbjct: 612 PPPPPPQSFGMAPISSAAPPPPPPP 636
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 790 PXPPPPXXXGGXXXXXXXXXPPPPP 864
P PPPP G PPPPP
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPP 654
Score = 24.6 bits (51), Expect(2) = 0.035
Identities = 10/28 (35%), Positives = 10/28 (35%)
Frame = +2
Query: 770 GGXXKXXPXPPPPXXGGGXXXXXXXXPP 853
G P PPPP GG PP
Sbjct: 645 GAGAPPPPPPPPPSGAGGPASVLAKLPP 672
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.3 bits (65), Expect(2) = 0.035
Identities = 21/89 (23%), Positives = 23/89 (25%)
Frame = +2
Query: 401 PGAPPVXXKXXFLXKKXXPPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKK 580
P APP + + P PPPP P P
Sbjct: 381 PAAPPPPTR---VESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPP 437
Query: 581 PPPPPXXXXGXTXXPXHXXXXXXXPPPXG 667
PPPPP G PPP G
Sbjct: 438 PPPPPPQSFGMAPISSAAPPPPPPPPPMG 466
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 791 PXPPPPXXGGGXXXXXXXXPPPPP 862
P PPPP G PPPPP
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPP 460
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 790 PXPPPPXXXGGXXXXXXXXXPPPPP 864
P PPPP G PPPPP
Sbjct: 438 PPPPPPQSFGMAPISSAAPPPPPPP 462
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 790 PXPPPPXXXGGXXXXXXXXXPPPPP 864
P PPPP G PPPPP
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPP 480
Score = 24.6 bits (51), Expect(2) = 0.035
Identities = 10/28 (35%), Positives = 10/28 (35%)
Frame = +2
Query: 770 GGXXKXXPXPPPPXXGGGXXXXXXXXPP 853
G P PPPP GG PP
Sbjct: 471 GAGAPPPPPPPPPSGAGGPASVLAKLPP 498
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 35.5 bits (78), Expect = 0.051
Identities = 18/68 (26%), Positives = 19/68 (27%)
Frame = +2
Query: 458 PXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKKPPPPPXXXXGXTXXPXHXX 637
P PPPPP P PP P PPPPP P +
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
Query: 638 XXXXXPPP 661
P P
Sbjct: 87 CQSYAPAP 94
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 455 PPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKKPPPPP 595
PP PPP P P PP P PPPPP
Sbjct: 34 PPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.16
Identities = 29/130 (22%), Positives = 29/130 (22%)
Frame = +2
Query: 473 PPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKKPPPPPXXXXGXTXXPXHXXXXXXX 652
PPPPP P PP PPPPP G P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP-------GM 316
Query: 653 PPPXGXXXXXXKKXGGXXXXXXXXXXXXXXXXXXXXXWXGGXXKXXPXPPPPXXGGGXXX 832
PPP GG PPPP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS 376
Query: 833 XXXXXPPPPP 862
PPPPP
Sbjct: 377 GHGMIPPPPP 386
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/68 (26%), Positives = 20/68 (29%), Gaps = 3/68 (4%)
Frame = +2
Query: 401 PGAPPVXXKXXFLXKKXXPPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPP---XPXXXX 571
P PP+ + PP PPPP P PP P
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG 331
Query: 572 KKKPPPPP 595
PPPPP
Sbjct: 332 GMPPPPPP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.16
Identities = 29/130 (22%), Positives = 29/130 (22%)
Frame = +2
Query: 473 PPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKKPPPPPXXXXGXTXXPXHXXXXXXX 652
PPPPP P PP PPPPP G P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP-------GM 326
Query: 653 PPPXGXXXXXXKKXGGXXXXXXXXXXXXXXXXXXXXXWXGGXXKXXPXPPPPXXGGGXXX 832
PPP GG PPPP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS 386
Query: 833 XXXXXPPPPP 862
PPPPP
Sbjct: 387 GHGMIPPPPP 396
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/68 (26%), Positives = 20/68 (29%), Gaps = 3/68 (4%)
Frame = +2
Query: 401 PGAPPVXXKXXFLXKKXXPPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPP---XPXXXX 571
P PP+ + PP PPPP P PP P
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG 341
Query: 572 KKKPPPPP 595
PPPPP
Sbjct: 342 GMPPPPPP 349
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 455 PPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKKPPPPP 595
PP PPPPP P G PP P PPPPP
Sbjct: 736 PPITGGPPPPP-------PPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/89 (28%), Positives = 26/89 (29%)
Frame = +2
Query: 401 PGAPPVXXKXXFLXKKXXPPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKK 580
PG PP+ P PPPP P G PP P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPP-------PPPGGLPPISGGPPPPPPPPGGCP 769
Query: 581 PPPPPXXXXGXTXXPXHXXXXXXXPPPXG 667
PPPPP G P PPP G
Sbjct: 770 PPPPPPPPGGFKGGP-------PPPPPPG 791
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 770 GGXXKXXPXPPPPXXGGGXXXXXXXXPPPPP 862
GG PPPP GG PPPPP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 796 PPPPXXXGGXXXXXXXXXPPPPP 864
PPPP GG PPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPP 748
Score = 27.5 bits (58), Expect(2) = 0.27
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 791 PXPPPPXXGGGXXXXXXXXPPPPP 862
P PPPP GG PPPPP
Sbjct: 769 PPPPPPPPPGG--FKGGPPPPPPP 790
Score = 24.2 bits (50), Expect(2) = 0.27
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +2
Query: 548 PPXPXXXXKKKPPPPPXXXXGXTXXPXHXXXXXXXPPPXGXXXXXXKKXGG 700
P P PPPPP T P PP G GG
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 455 PPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKKPPPPP 595
PP PPPPP P G PP P PPPPP
Sbjct: 736 PPITGGPPPPP-------PPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/89 (28%), Positives = 26/89 (29%)
Frame = +2
Query: 401 PGAPPVXXKXXFLXKKXXPPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKK 580
PG PP+ P PPPP P G PP P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPP-------PPPGGLPPISGGPPPPPPPPGGCP 769
Query: 581 PPPPPXXXXGXTXXPXHXXXXXXXPPPXG 667
PPPPP G P PPP G
Sbjct: 770 PPPPPPPPGGFKGGP-------PPPPPPG 791
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 770 GGXXKXXPXPPPPXXGGGXXXXXXXXPPPPP 862
GG PPPP GG PPPPP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 796 PPPPXXXGGXXXXXXXXXPPPPP 864
PPPP GG PPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPP 748
Score = 27.5 bits (58), Expect(2) = 0.27
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 791 PXPPPPXXGGGXXXXXXXXPPPPP 862
P PPPP GG PPPPP
Sbjct: 769 PPPPPPPPPGG--FKGGPPPPPPP 790
Score = 24.2 bits (50), Expect(2) = 0.27
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +2
Query: 548 PPXPXXXXKKKPPPPPXXXXGXTXXPXHXXXXXXXPPPXGXXXXXXKKXGG 700
P P PPPPP T P PP G GG
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 455 PPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKKPPPPP 595
PP PPPPP P G PP P PPPPP
Sbjct: 319 PPITGGPPPPP-------PPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/89 (28%), Positives = 26/89 (29%)
Frame = +2
Query: 401 PGAPPVXXKXXFLXKKXXPPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKK 580
PG PP+ P PPPP P G PP P
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPP-------PPPGGLPPISGGPPPPPPPPGGCP 352
Query: 581 PPPPPXXXXGXTXXPXHXXXXXXXPPPXG 667
PPPPP G P PPP G
Sbjct: 353 PPPPPPPPGGFKGGP-------PPPPPPG 374
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 770 GGXXKXXPXPPPPXXGGGXXXXXXXXPPPPP 862
GG PPPP GG PPPPP
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 796 PPPPXXXGGXXXXXXXXXPPPPP 864
PPPP GG PPPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPP 331
Score = 27.5 bits (58), Expect(2) = 0.28
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 791 PXPPPPXXGGGXXXXXXXXPPPPP 862
P PPPP GG PPPPP
Sbjct: 352 PPPPPPPPPGG--FKGGPPPPPPP 373
Score = 24.2 bits (50), Expect(2) = 0.28
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +2
Query: 548 PPXPXXXXKKKPPPPPXXXXGXTXXPXHXXXXXXXPPPXGXXXXXXKKXGG 700
P P PPPPP T P PP G GG
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 455 PPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKKPPPPP 595
PP PPPPP P G PP P PPPPP
Sbjct: 85 PPAPLPPPPPP-----ASPCCGPSPVPAPCCPPPPAPAAPCCPPPPP 126
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 769 GGXXXKXPXPPPPXXXGGXXXXXXXXXPPPPP 864
GG P PPPP G PPPPP
Sbjct: 667 GGLGGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 769 GGXXXKXPXPPPPXXXGGXXXXXXXXXPPPPP 864
GG P PPPP G PPPPP
Sbjct: 667 GGLGGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -2
Query: 858 GGGGXXXXXXXXPPPXXG-GGGXGXFXXXPP 769
GGGG PPP G GGG G + PP
Sbjct: 22 GGGGGCGCAPPPPPPACGCGGGGGGYAAPPP 52
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 770 GGXXKXXPXPPPPXXGGGXXXXXXXXPPP 856
GG P PPPP G G PPP
Sbjct: 24 GGGCGCAPPPPPPACGCGGGGGGYAAPPP 52
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 791 PXPPPPXXGGGXXXXXXXXPPPPP 862
P PPPP GGG PPPPP
Sbjct: 40 PPPPPPPCGGG---YEAPPPPPPP 60
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 25.0 bits (52), Expect(2) = 3.0
Identities = 17/68 (25%), Positives = 18/68 (26%)
Frame = +2
Query: 458 PXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKKPPPPPXXXXGXTXXPXHXX 637
P PPPPP PP K PPPP + P
Sbjct: 436 PTRVAPPPPPSAPPTIKFPISTGPSYSSTTPPTTP----KPAPPPPSRIPNPSPSPQPAE 491
Query: 638 XXXXXPPP 661
PPP
Sbjct: 492 VSKSPPPP 499
Score = 23.0 bits (47), Expect(2) = 3.0
Identities = 11/28 (39%), Positives = 11/28 (39%), Gaps = 1/28 (3%)
Frame = +2
Query: 782 KXXPXPPP-PXXGGGXXXXXXXXPPPPP 862
K P PPP P PPPPP
Sbjct: 494 KSPPPPPPLPPIATPSSVPPPPPPPPPP 521
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 455 PPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKKPPPPP 595
PP PPPPP PP P PPPPP
Sbjct: 536 PPVSSIPPPPPIAGLLAANGTN-VPIPPPPPPPLPQNLSGAPPPPPP 581
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 455 PPXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKKPPPPP 595
P PPPPP P PP PPPPP
Sbjct: 318 PTTFILPPPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPP 364
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 861 GGGGGXXXXXXXXPPPXXGGGGXG 790
GGGGG PPP GGG G
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCG 66
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 861 GGGGGXXXXXXXXPPPXXGGGGXG 790
GGGGG PPP GGG G
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCG 123
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 5.9
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = +2
Query: 458 PXXXXPPPPPFXXXXXXPXXGXXXXXXXXXPPXPXXXXKKKPPPPPXXXXGXTXXPXHXX 637
P PPP P P G PP P PPPPP G P
Sbjct: 61 PSFFIPPPVPNGFIPPPPGPGGI-------PPPPPMFAGGIPPPPPM-MGGIPPPPPMFG 112
Query: 638 XXXXXPPPXG 667
PPP G
Sbjct: 113 APPPPPPPSG 122
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 861 GGGGGXXXXXXXXPPPXXGGGGXG 790
GGGGG PPP GGG G
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGGCG 84
Score = 28.7 bits (61), Expect = 5.9
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = -2
Query: 660 GGGXXXKXXXCXGXXVXPXKXXGGGGGFFFXXXXGXGGXXXXXXXXKPXXGXXXXXXXGG 481
GGG C G GGGGG G GG G GG
Sbjct: 69 GGGCAPPPAPCGGGCGGGGGGCGGGGGGC-GGGGGCGGGGGGCGGGGGGCGGGGGGCGGG 127
Query: 480 GGGXXFXGG 454
GGG GG
Sbjct: 128 GGGCGGGGG 136
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 861 GGGGGXXXXXXXXPPPXXGGGGXG 790
GGGGG PPP GGG G
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGGCG 84
Score = 28.7 bits (61), Expect = 5.9
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = -2
Query: 660 GGGXXXKXXXCXGXXVXPXKXXGGGGGFFFXXXXGXGGXXXXXXXXKPXXGXXXXXXXGG 481
GGG C G GGGGG G GG G GG
Sbjct: 69 GGGCAPPPAPCGGGCGGGGGGCGGGGGGC-GGGGGCGGGGGGCGGGGGGCGGGGGGCGGG 127
Query: 480 GGGXXFXGG 454
GGG GG
Sbjct: 128 GGGCGGGGG 136
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 861 GGGGGXXXXXXXXPPPXXGGGGXG 790
GGGGG PPP GG G G
Sbjct: 35 GGGGGGGCCAPPPPPPVCGGCGCG 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,582,781
Number of Sequences: 27780
Number of extensions: 292894
Number of successful extensions: 1723
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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