Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_A24
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0588 - 19020827-19021315                                         29   3.7  
02_04_0040 + 19141673-19142560                                         29   4.9  
12_02_0651 + 21522089-21522128,21522472-21522593,21523386-215235...    29   6.5  
01_06_0137 + 26855468-26856358                                         29   6.5  
11_08_0056 + 28098383-28099255                                         28   8.5  

>10_08_0588 - 19020827-19021315
          Length = 162

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -1

Query: 575 WPGWSPAARRFHTVPGPAGANDPGW 501
           WP W P  RR H V G  G     W
Sbjct: 135 WPEWKPNCRREHGVAGAGGLGRRPW 159


>02_04_0040 + 19141673-19142560
          Length = 295

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 33/104 (31%), Positives = 45/104 (43%), Gaps = 16/104 (15%)
 Frame = +1

Query: 490 QLAGHPGSLAPAGP-----GTVWKRRAAGDHPGHNPE-RDAYEALAACP-HMRGVI-PRY 645
           Q+AGH  S    GP     G  +K   AG+   H      A+ A  A P  +RG   PR+
Sbjct: 11  QVAGHRASADKLGPLVDGEGLFYKPLQAGERGEHEAAFYAAFTAHPAVPPRVRGAFFPRF 70

Query: 646 Y------RELEYDGERF--IELQDLLHGFRNPHVMDIKMGTRTF 753
           +            G  +  I L DLL G  +P V D+K+G  T+
Sbjct: 71  HGTRFLPAPASPGGAPYPHIVLDDLLAGLPSPCVADVKIGACTW 114


>12_02_0651 +
           21522089-21522128,21522472-21522593,21523386-21523544,
           21523653-21523730,21523821-21523865,21524121-21524187,
           21524261-21524322,21524407-21524546,21524752-21524878,
           21524957-21525071,21525210-21525298,21525533-21525616,
           21525857-21526219,21526300-21526689,21526835-21526894,
           21527530-21527553
          Length = 654

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
 Frame = +1

Query: 439 SAPASDALLKSRSSEWFQLAGHPGSLAPAGPGTVWKRRAAGDHPGHNPERDAY-EALAAC 615
           SAP  D LL   S    +LA H  + AP    +   R +      H P R+   E L   
Sbjct: 393 SAPDVDPLLYEYSPSTKELASHLNNCAPLYSNSSVARHSLASTVEHPPRRELLSEPLLQN 452

Query: 616 PHMRGVIPRYYRELE 660
           P++   + R + + E
Sbjct: 453 PNLGASLHRQFHQSE 467


>01_06_0137 + 26855468-26856358
          Length = 296

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 566 WSPAARRFHTVPGPAGANDPGW 501
           W  AARR  T P  AG  DP W
Sbjct: 49  WVDAARRLQTRPDRAGGVDPEW 70


>11_08_0056 + 28098383-28099255
          Length = 290

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = -1

Query: 578 LWPGWSPAARRFHTVPGPAGANDPGWPASW-NHSDERDFSNASEAG 444
           L P  + AA      P PA A+DPG    W  H +E     A + G
Sbjct: 7   LLPFAAAAALLLLAAPPPATADDPGLAVYWGRHKEEGSLREACDTG 52


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,711,936
Number of Sequences: 37544
Number of extensions: 475570
Number of successful extensions: 1405
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1405
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)