BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_A24
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88314-4|AAK71360.1| 494|Caenorhabditis elegans Let-23 fertilit... 121 8e-28
U88314-3|AAK71361.1| 394|Caenorhabditis elegans Let-23 fertilit... 121 8e-28
U88314-2|AAF99884.2| 461|Caenorhabditis elegans Let-23 fertilit... 121 8e-28
AF045613-1|AAC38962.1| 461|Caenorhabditis elegans inositol tris... 121 8e-28
AF045612-1|AAC38961.1| 394|Caenorhabditis elegans inositol tris... 121 8e-28
AF045611-1|AAC38960.1| 494|Caenorhabditis elegans inositol tris... 121 8e-28
AC084154-3|AAK29869.1| 323|Caenorhabditis elegans Hypothetical ... 31 0.82
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 29 3.3
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 29 3.3
U46753-12|AAM98047.2| 539|Caenorhabditis elegans Dishevelled re... 29 4.4
U46753-10|AAM98049.1| 623|Caenorhabditis elegans Dishevelled re... 29 4.4
Z99269-1|CAB16467.1| 1461|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z81072-2|CAB03023.2| 332|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z70310-10|CAA94371.2| 341|Caenorhabditis elegans Hypothetical p... 29 5.8
U97550-2|AAK18979.1| 280|Caenorhabditis elegans Hypothetical pr... 29 5.8
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr... 29 5.8
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 29 5.8
AL023841-13|CAA19513.2| 341|Caenorhabditis elegans Hypothetical... 29 5.8
>U88314-4|AAK71360.1| 494|Caenorhabditis elegans Let-23 fertility
effector/regulatorprotein 2, isoform a protein.
Length = 494
Score = 121 bits (291), Expect = 8e-28
Identities = 62/137 (45%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
Frame = +1
Query: 415 LAINALELSAPASDALLKSRSSEWFQLAGHPGSLAPAGPGTVWKRRAAGDHPGHNPERDA 594
+++ + ++A D LK R +W QL+GH GS+ PA P T++K++ A G A
Sbjct: 174 VSVETMAITALPMDVWLKERLKKWVQLSGHEGSIVPATPHTLYKKQCANCGEGR-----A 228
Query: 595 YEALAACPHMRGVIPRYYRELEYDGERFIELQDLLHGFRNPH---VMDIKMGTRTFLEDE 765
Y+ ++ P + G P+YY ELE + E FIE++DLL F +P +MDIK+GTRTFLE E
Sbjct: 229 YKNISKDPALDGFTPKYYDELEKNEEHFIEIEDLLQQFHDPTKTAIMDIKIGTRTFLESE 288
Query: 766 VSNAHARADLYEKMVRL 816
VSN RADLYEKMV +
Sbjct: 289 VSNTKKRADLYEKMVAI 305
>U88314-3|AAK71361.1| 394|Caenorhabditis elegans Let-23 fertility
effector/regulatorprotein 2, isoform b protein.
Length = 394
Score = 121 bits (291), Expect = 8e-28
Identities = 62/137 (45%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
Frame = +1
Query: 415 LAINALELSAPASDALLKSRSSEWFQLAGHPGSLAPAGPGTVWKRRAAGDHPGHNPERDA 594
+++ + ++A D LK R +W QL+GH GS+ PA P T++K++ A G A
Sbjct: 74 VSVETMAITALPMDVWLKERLKKWVQLSGHEGSIVPATPHTLYKKQCANCGEGR-----A 128
Query: 595 YEALAACPHMRGVIPRYYRELEYDGERFIELQDLLHGFRNPH---VMDIKMGTRTFLEDE 765
Y+ ++ P + G P+YY ELE + E FIE++DLL F +P +MDIK+GTRTFLE E
Sbjct: 129 YKNISKDPALDGFTPKYYDELEKNEEHFIEIEDLLQQFHDPTKTAIMDIKIGTRTFLESE 188
Query: 766 VSNAHARADLYEKMVRL 816
VSN RADLYEKMV +
Sbjct: 189 VSNTKKRADLYEKMVAI 205
>U88314-2|AAF99884.2| 461|Caenorhabditis elegans Let-23 fertility
effector/regulatorprotein 2, isoform c protein.
Length = 461
Score = 121 bits (291), Expect = 8e-28
Identities = 62/137 (45%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
Frame = +1
Query: 415 LAINALELSAPASDALLKSRSSEWFQLAGHPGSLAPAGPGTVWKRRAAGDHPGHNPERDA 594
+++ + ++A D LK R +W QL+GH GS+ PA P T++K++ A G A
Sbjct: 141 VSVETMAITALPMDVWLKERLKKWVQLSGHEGSIVPATPHTLYKKQCANCGEGR-----A 195
Query: 595 YEALAACPHMRGVIPRYYRELEYDGERFIELQDLLHGFRNPH---VMDIKMGTRTFLEDE 765
Y+ ++ P + G P+YY ELE + E FIE++DLL F +P +MDIK+GTRTFLE E
Sbjct: 196 YKNISKDPALDGFTPKYYDELEKNEEHFIEIEDLLQQFHDPTKTAIMDIKIGTRTFLESE 255
Query: 766 VSNAHARADLYEKMVRL 816
VSN RADLYEKMV +
Sbjct: 256 VSNTKKRADLYEKMVAI 272
>AF045613-1|AAC38962.1| 461|Caenorhabditis elegans inositol
trisphosphate 3-kinaseform 3 protein.
Length = 461
Score = 121 bits (291), Expect = 8e-28
Identities = 62/137 (45%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
Frame = +1
Query: 415 LAINALELSAPASDALLKSRSSEWFQLAGHPGSLAPAGPGTVWKRRAAGDHPGHNPERDA 594
+++ + ++A D LK R +W QL+GH GS+ PA P T++K++ A G A
Sbjct: 141 VSVETMAITALPMDVWLKERLKKWVQLSGHEGSIVPATPHTLYKKQCANCGEGR-----A 195
Query: 595 YEALAACPHMRGVIPRYYRELEYDGERFIELQDLLHGFRNPH---VMDIKMGTRTFLEDE 765
Y+ ++ P + G P+YY ELE + E FIE++DLL F +P +MDIK+GTRTFLE E
Sbjct: 196 YKNISKDPALDGFTPKYYDELEKNEEHFIEIEDLLQQFHDPTKTAIMDIKIGTRTFLESE 255
Query: 766 VSNAHARADLYEKMVRL 816
VSN RADLYEKMV +
Sbjct: 256 VSNTKKRADLYEKMVAI 272
>AF045612-1|AAC38961.1| 394|Caenorhabditis elegans inositol
trisphosphate 3-kinaseform 2 protein.
Length = 394
Score = 121 bits (291), Expect = 8e-28
Identities = 62/137 (45%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
Frame = +1
Query: 415 LAINALELSAPASDALLKSRSSEWFQLAGHPGSLAPAGPGTVWKRRAAGDHPGHNPERDA 594
+++ + ++A D LK R +W QL+GH GS+ PA P T++K++ A G A
Sbjct: 74 VSVETMAITALPMDVWLKERLKKWVQLSGHEGSIVPATPHTLYKKQCANCGEGR-----A 128
Query: 595 YEALAACPHMRGVIPRYYRELEYDGERFIELQDLLHGFRNPH---VMDIKMGTRTFLEDE 765
Y+ ++ P + G P+YY ELE + E FIE++DLL F +P +MDIK+GTRTFLE E
Sbjct: 129 YKNISKDPALDGFTPKYYDELEKNEEHFIEIEDLLQQFHDPTKTAIMDIKIGTRTFLESE 188
Query: 766 VSNAHARADLYEKMVRL 816
VSN RADLYEKMV +
Sbjct: 189 VSNTKKRADLYEKMVAI 205
>AF045611-1|AAC38960.1| 494|Caenorhabditis elegans inositol
trisphosphate 3-kinaseform 1 protein.
Length = 494
Score = 121 bits (291), Expect = 8e-28
Identities = 62/137 (45%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
Frame = +1
Query: 415 LAINALELSAPASDALLKSRSSEWFQLAGHPGSLAPAGPGTVWKRRAAGDHPGHNPERDA 594
+++ + ++A D LK R +W QL+GH GS+ PA P T++K++ A G A
Sbjct: 174 VSVETMAITALPMDVWLKERLKKWVQLSGHEGSIVPATPHTLYKKQCANCGEGR-----A 228
Query: 595 YEALAACPHMRGVIPRYYRELEYDGERFIELQDLLHGFRNPH---VMDIKMGTRTFLEDE 765
Y+ ++ P + G P+YY ELE + E FIE++DLL F +P +MDIK+GTRTFLE E
Sbjct: 229 YKNISKDPALDGFTPKYYDELEKNEEHFIEIEDLLQQFHDPTKTAIMDIKIGTRTFLESE 288
Query: 766 VSNAHARADLYEKMVRL 816
VSN RADLYEKMV +
Sbjct: 289 VSNTKKRADLYEKMVAI 305
>AC084154-3|AAK29869.1| 323|Caenorhabditis elegans Hypothetical
protein Y22D7AR.6 protein.
Length = 323
Score = 31.5 bits (68), Expect = 0.82
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 670 ERFIELQDLLHGFRNPHVMDIKMGTR 747
+ FI L DL + ++P ++D+K+GTR
Sbjct: 115 KNFIVLSDLTYRMKSPRILDLKLGTR 140
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/79 (24%), Positives = 32/79 (40%)
Frame = -3
Query: 753 ECPGSHFNVHDMRIAKAVKKILKFNETFTVVFQFTIVARNNATHMRTSCKGFVSISFRVV 574
EC HF H +A+ + ++N + +N + + F+ S R
Sbjct: 1091 ECKNCHFKTHKDHVAQGSLPMCRYNTGLSRELVLMAPQTDNCNKWVSQLRRFIE-SSRSA 1149
Query: 573 AGVVARSTTFPHCTGSSGS 517
A V+R ++ H GSS S
Sbjct: 1150 AVSVSRVSSRRHAPGSSNS 1168
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/79 (24%), Positives = 32/79 (40%)
Frame = -3
Query: 753 ECPGSHFNVHDMRIAKAVKKILKFNETFTVVFQFTIVARNNATHMRTSCKGFVSISFRVV 574
EC HF H +A+ + ++N + +N + + F+ S R
Sbjct: 1091 ECKNCHFKTHKDHVAQGSLPMCRYNTGLSRELVLMAPQTDNCNKWVSQLRRFIE-SSRSA 1149
Query: 573 AGVVARSTTFPHCTGSSGS 517
A V+R ++ H GSS S
Sbjct: 1150 AVSVSRVSSRRHAPGSSNS 1168
>U46753-12|AAM98047.2| 539|Caenorhabditis elegans Dishevelled
related protein 1,isoform a protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -1
Query: 569 GWSPAARRFHTVPGPAGANDPGWPASWNHSDERDFSNASEAGADSSKALIA 417
G S R++ +VPGPA +N G P ++ H+ F N S DS + A
Sbjct: 159 GSSGKMRKYPSVPGPAPSNRNGPPMNYQHA-AYQFDN-SMMSTDSESMISA 207
>U46753-10|AAM98049.1| 623|Caenorhabditis elegans Dishevelled
related protein 1,isoform c protein.
Length = 623
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -1
Query: 569 GWSPAARRFHTVPGPAGANDPGWPASWNHSDERDFSNASEAGADSSKALIA 417
G S R++ +VPGPA +N G P ++ H+ F N S DS + A
Sbjct: 159 GSSGKMRKYPSVPGPAPSNRNGPPMNYQHA-AYQFDN-SMMSTDSESMISA 207
>Z99269-1|CAB16467.1| 1461|Caenorhabditis elegans Hypothetical
protein W10C6.1 protein.
Length = 1461
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Frame = +1
Query: 517 APAGPGTVWKRRAAGDHPGHNPERDAYEALAACPHMRGVIPRYYR-----ELEYDGERFI 681
+P G G R D + R +E + P + Y+ EL+ +GE F+
Sbjct: 303 SPEGHGGKQMRPRMSDSEVLSMMRQFFEEMTFRPKSEVITEDGYKCHLSVELDPNGEGFV 362
Query: 682 ELQDLLHGFRN 714
QDLLH F +
Sbjct: 363 HTQDLLHAFHS 373
>Z81072-2|CAB03023.2| 332|Caenorhabditis elegans Hypothetical
protein F30A10.3 protein.
Length = 332
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 631 VIPRYYRELEYDGERFIELQDLLHGFRNPHVMDIKMGTRTFLED 762
V+ R +ELE F+ L++++ + P V+D+K+GTR +D
Sbjct: 119 VVERMLKELE--PTPFLLLENVVAHYTRPCVLDLKIGTRQHGDD 160
>Z70310-10|CAA94371.2| 341|Caenorhabditis elegans Hypothetical
protein Y43C5B.3 protein.
Length = 341
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -1
Query: 572 PGWSPAARRFHTVPGPAGANDPGWPASWNHSDERDF 465
P PA R + VPG G ++P W H D + F
Sbjct: 8 PQMLPAPRDCYAVPGKPGHSEPLTVVGWEHMDLKLF 43
>U97550-2|AAK18979.1| 280|Caenorhabditis elegans Hypothetical
protein T20F7.3 protein.
Length = 280
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 676 FIELQDLLHGFRNPHVMDIKMGTRT---FLEDEVSNAHARADL 795
++ ++D H +P ++D+K+GTRT ++ +E H + L
Sbjct: 106 YLLMKDEAHAAVSPRILDLKLGTRTHSDYISEEKKINHIKKSL 148
>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
protein F37A4.4 protein.
Length = 1163
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 566 TPATTLNEMLTKPLQLVLICVALFLATIV 652
TP ++ T P+ +VLICVA+ L ++
Sbjct: 751 TPKVSVQSESTSPIVVVLICVAIVLVLVI 779
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -1
Query: 566 WSPAARRFHTVPGPAGANDPGWPASWNHSDERDFSN 459
W R ++ V PA +DP + ++SD+ DF +
Sbjct: 1606 WHVRLRHYYDVDQPASLSDPQFECDSDYSDDGDFDD 1641
>AL023841-13|CAA19513.2| 341|Caenorhabditis elegans Hypothetical
protein Y43C5B.3 protein.
Length = 341
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -1
Query: 572 PGWSPAARRFHTVPGPAGANDPGWPASWNHSDERDF 465
P PA R + VPG G ++P W H D + F
Sbjct: 8 PQMLPAPRDCYAVPGKPGHSEPLTVVGWEHMDLKLF 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,255,664
Number of Sequences: 27780
Number of extensions: 366841
Number of successful extensions: 1021
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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