Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_A23
(907 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 121 2e-28
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 93 5e-20
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 89 8e-19
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 84 2e-17
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 80 5e-16
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 69 7e-13
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 69 9e-13
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 67 3e-12
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 66 5e-12
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 66 6e-12
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 57 4e-09
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 56 7e-09
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 56 9e-09
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 53 6e-08
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 52 9e-08
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 52 1e-07
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 47 4e-06
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 46 6e-06
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 46 1e-05
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 40 4e-04
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 39 0.001
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 34 0.024
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 26 6.4
SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces... 26 6.4
SPBC342.03 |||1,3-beta-glucanosyltransferase |Schizosaccharomyce... 26 6.4
SPAC6F6.12 |||autophagy associated protein Atg24|Schizosaccharom... 26 8.5
SPAC6C3.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 8.5
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 121 bits (291), Expect = 2e-28
Identities = 64/149 (42%), Positives = 83/149 (55%)
Frame = +2
Query: 86 DNKLYEILGVSKNASESEIKRNYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQV 265
+ KLYE+L V AS++E+K+ Y KLA ++HPDKNP AGDKFKEIS AYE+L+D +KR
Sbjct: 4 ETKLYEVLNVDVTASQAELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADEEKRAT 63
Query: 266 YDLYXXXXXXXXXXXXXFPADEIXXXXXXXXXXXXXXXXXXXXXXPVRGEDTMHPLAVTL 445
YD + AD++ P +G+D +H + VTL
Sbjct: 64 YDRFGEEGLQGGGADGGMSADDL-----FASFFGGGMFGGGMPRGPRKGKDLVHTIKVTL 118
Query: 446 EXLYAGKTTKFARSAKNVLCAHCXGVGGK 532
E LY GKTTK A K V+C C G GGK
Sbjct: 119 EDLYRGKTTKLALQ-KKVICPKCSGRGGK 146
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 93.1 bits (221), Expect = 5e-20
Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 5/160 (3%)
Frame = +2
Query: 80 MADNKLYEILGVSKNASESEIKRNYHKLAKEFHPDKNP-----AAGDKFKEISYAYEVLS 244
+ D KLY+IL V AS EIK++Y +LA HPDK P A ++F+ + AY++L
Sbjct: 2 VVDTKLYDILEVHFEASAEEIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDILK 61
Query: 245 DPKKRQVYDLYXXXXXXXXXXXXXFPADEIXXXXXXXXXXXXXXXXXXXXXXPVRGEDTM 424
DP+ R++YD+Y D++ RG D +
Sbjct: 62 DPESREMYDMYGMNSDSNSQFDGGVNLDDVLAQMFGMNFEAGGPGKNVPRDRKRRGSDVI 121
Query: 425 HPLAVTLEXLYAGKTTKFARSAKNVLCAHCXGVGGKPRFS 544
H ++LE ++ GK K R+ +N LC C G GGK RF+
Sbjct: 122 HDYEISLEDMFKGKEVKL-RATRNTLCPRCQGRGGK-RFA 159
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 89.0 bits (211), Expect = 8e-19
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = +2
Query: 80 MADNKLYEILGVSKNASESEIKRNYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKR 259
+AD KLY+ L V ASE+E+K+ Y KLA ++HPDKNP KFKEIS AYEVLSDP++R
Sbjct: 2 VADTKLYDCLEVRPEASEAELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEVLSDPQRR 61
Query: 260 QVYDLY 277
++YD Y
Sbjct: 62 KLYDQY 67
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 84.2 bits (199), Expect = 2e-17
Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 2/62 (3%)
Frame = +2
Query: 98 YEILGVSKNASESEIKRNYHKLAKEFHPDKNP--AAGDKFKEISYAYEVLSDPKKRQVYD 271
Y+ LGVSK+AS SEIK Y+KLAK++HPD NP AA DKF EI AYEVL DPKK++ +D
Sbjct: 88 YKTLGVSKSASASEIKSAYYKLAKQYHPDANPDKAAQDKFVEIKQAYEVLQDPKKKKAFD 147
Query: 272 LY 277
Y
Sbjct: 148 TY 149
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 79.8 bits (188), Expect = 5e-16
Identities = 37/62 (59%), Positives = 51/62 (82%), Gaps = 3/62 (4%)
Frame = +2
Query: 101 EILGVSKNASESEIKRNYHKLAKEFHPDKNPA---AGDKFKEISYAYEVLSDPKKRQVYD 271
+ILGVSK+ASESEI++ Y +L K++HPDKNP A +KF EI+ A+EVLSDP++R++YD
Sbjct: 10 QILGVSKDASESEIRKAYRQLTKQWHPDKNPGNEEAQEKFIEINKAHEVLSDPEQRKIYD 69
Query: 272 LY 277
Y
Sbjct: 70 AY 71
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 69.3 bits (162), Expect = 7e-13
Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Frame = +2
Query: 86 DNKLYEILGVSKNASESEIKRNYHKLAKEFHPDKNP----AAGDKFKEISYAYEVLSDPK 253
D + Y++LG+S +A+ +IK+ Y KLA ++HPDKNP A +KF++IS AY+VL D K
Sbjct: 6 DTEYYDLLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEK 65
Query: 254 KRQVYDLY 277
R YD +
Sbjct: 66 LRSQYDQF 73
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 68.9 bits (161), Expect = 9e-13
Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Frame = +2
Query: 77 KMADNKLYEILGVSKNASESEIKRNYHKLAKEFHPDKN--PAAGDKFKEISYAYEVLSDP 250
K +++ YEIL + K +++EIK++Y KLA + HPDKN P+A + FK +S A++VLSDP
Sbjct: 108 KYKNHQYYEILDLKKTCTDTEIKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDP 167
Query: 251 KKRQVYD 271
R YD
Sbjct: 168 NLRAHYD 174
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 67.3 bits (157), Expect = 3e-12
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +2
Query: 32 RESLRXAFESSTSREKMADNKLYEILGVSKNASESEIKRNYHKLAKEFHPDKNPA---AG 202
R+ LR + + K D+ Y+ILGVSK A++ EIK+ Y KLA +HPDKN A
Sbjct: 332 RQELRR-LQLELKKSKRKDH--YKILGVSKEATDIEIKKAYRKLALVYHPDKNAGNLEAE 388
Query: 203 DKFKEISYAYEVLSDPKKRQVYD 271
+FKE+ AY +LSDP+ R+ +D
Sbjct: 389 ARFKEVGEAYTILSDPESRRRFD 411
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 66.5 bits (155), Expect = 5e-12
Identities = 30/65 (46%), Positives = 48/65 (73%), Gaps = 5/65 (7%)
Frame = +2
Query: 92 KLYEILGVSKNASESEIKRNYHKLAKEFHPDKNPA-----AGDKFKEISYAYEVLSDPKK 256
+LY LG+ K+A+ +IK +Y++L++ FHPD++ A A +KF+ I +AYEVLSDP K
Sbjct: 8 ELYLALGLPKDATSDQIKESYYRLSRLFHPDRHTADQKAAAEEKFQIIQHAYEVLSDPSK 67
Query: 257 RQVYD 271
+++YD
Sbjct: 68 KEIYD 72
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 66.1 bits (154), Expect = 6e-12
Identities = 31/70 (44%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
Frame = +2
Query: 74 EKMADNKLYEILGVSKNASESEIKRNYHKLAKEFHPDKN----PAAGDKFKEISYAYEVL 241
+++ D Y+IL +S +A IK++Y +LA +HPDKN AA +KF++++ AY+VL
Sbjct: 3 QRVVDRDYYDILNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQVL 62
Query: 242 SDPKKRQVYD 271
SDPK R+ YD
Sbjct: 63 SDPKLREKYD 72
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 56.8 bits (131), Expect = 4e-09
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Frame = +2
Query: 86 DNKLYEILGVSKNASESEIKRNYHKLAKEFHPDKNPAAGDK---FKEISYAYEVLSDPKK 256
D YEIL V+ ++ EIK NY KLA ++HPD+NP D F +I+ AY +LS+ K
Sbjct: 7 DMDCYEILQVNHDSDLQEIKANYRKLALQYHPDRNPGIEDYNEIFSQINAAYNILSNDDK 66
Query: 257 RQVYD 271
R+ ++
Sbjct: 67 RKWHE 71
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 56.0 bits (129), Expect = 7e-09
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Frame = +2
Query: 98 YEILGVSKNASESEIKRNYHKLAKEFHPDKN---PAAGDKFKEISYAYEVLSDPKKRQVY 268
YE+LG++++A + EI R + K + ++HPDKN P A +KF + AY L D + R+ Y
Sbjct: 11 YELLGINEDAQDQEIHRAWRKTSLKYHPDKNPNDPKAAEKFHMLQLAYNALIDVQLRKAY 70
Query: 269 D 271
D
Sbjct: 71 D 71
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 55.6 bits (128), Expect = 9e-09
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Frame = +2
Query: 98 YEILGVSKNASESEIKRNYHKLAKEFHPDKNPA----AGDKFKEISYAYEVLSDPKKRQV 265
Y IL + KNA+ +I++ Y LA ++HPD+NP A +F+ + A+EVLSD KR +
Sbjct: 14 YAILKLQKNATFQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKRLI 73
Query: 266 YD 271
YD
Sbjct: 74 YD 75
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 52.8 bits (121), Expect = 6e-08
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Frame = +2
Query: 98 YEILGVSKNASESEIKRNYHKLAKEFHPDKNPAAG----DKFKEISYAYEVLSDPKKRQV 265
Y ILG +S EI++ Y KL +HPD+NP +F+ I A+EVL DPK R++
Sbjct: 14 YTILGAESTSSYVEIRQQYLKLVLRYHPDRNPGREAEVLPQFQLIQKAHEVLKDPKLREL 73
Query: 266 YD 271
+D
Sbjct: 74 FD 75
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 52.4 bits (120), Expect = 9e-08
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 8/84 (9%)
Frame = +2
Query: 50 AFESSTSREKMADNKLYEILGVSKNASESEIKRNYHKLAKEFHPDK-----NPAAGDKFK 214
+++ + SR K+ YEILG++K S +++R+Y +L+ +FHPDK N + K
Sbjct: 84 SYKIANSRLKLNIWDPYEILGIAKGTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEK 143
Query: 215 ---EISYAYEVLSDPKKRQVYDLY 277
EI+ AY L+D K R+ Y LY
Sbjct: 144 HYIEITNAYRALTDDKTRENYALY 167
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 52.0 bits (119), Expect = 1e-07
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Frame = +2
Query: 98 YEILGVSKNASESEIKRNYHKLAKEFHPD------KNPAAGDKFKEISYAYEVLSDPKKR 259
Y +LGV K+AS+ I+R Y K A + HPD K A +F +++ AY VLSD K+R
Sbjct: 33 YSVLGVEKDASDELIRRAYRKKALQHHPDRIHDEEKKVEARIEFDKVAIAYGVLSDKKRR 92
Query: 260 QVYD 271
+ YD
Sbjct: 93 KHYD 96
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 46.8 bits (106), Expect = 4e-06
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Frame = +2
Query: 98 YEILGVSKNASESEIKRNYHKLAKEFHPDK-NPA----AGDKFKEISYAYEVLSDPKKRQ 262
Y IL ++ AS EIK Y K A E HPD+ +P+ A ++F+ ++ AY VLSD +R
Sbjct: 6 YAILNITPKASAEEIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAYYVLSDNSRRA 65
Query: 263 VYD 271
YD
Sbjct: 66 QYD 68
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 46.4 bits (105), Expect = 6e-06
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
Frame = +2
Query: 98 YEILGVSK---NASESEIKRNYHKLAKEFHPDKNPAAGDK-----FKEISYAYEVLSDPK 253
Y +LG+SK A +IK+ + K + HPDK A+G+ FK I AYE+LSDP
Sbjct: 99 YAVLGLSKYRYKADTEQIKKAHLKKVLKHHPDKKAASGNINDDSFFKCIQKAYEILSDPV 158
Query: 254 KRQVYD 271
+R+ +D
Sbjct: 159 RRRQFD 164
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 45.6 bits (103), Expect = 1e-05
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 53 FESSTSREKMADNK--LYEILGVSKNASESEIKRNYHKLAKEFHPDKNPAAGDKFKEISY 226
F S + + NK YE+L V AS EI R Y K + +HPDKNP + + + +
Sbjct: 25 FRVVDSLKSILKNKATFYELLEVPTKASIKEINRAYRKKSILYHPDKNPKSKELYTLLGL 84
Query: 227 AYEVLSDPKKRQVYDLY 277
+L + + R+ YD +
Sbjct: 85 IVNILRNTETRKRYDYF 101
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 40.3 bits (90), Expect = 4e-04
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +2
Query: 98 YEILGVS--KNASESEIKRNYHKLAKEFHPDK---NPAAGDKFKEISYAYEVLSDPKKRQ 262
Y +L + K ++ EIK Y K FHPDK P+ ++ AY+VLS K RQ
Sbjct: 4 YSVLNLKDGKTYTDDEIKEAYRKALLLFHPDKCKEKPSVVYTIDQVKEAYQVLSSEKDRQ 63
Query: 263 VYDL 274
Y +
Sbjct: 64 QYQI 67
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 38.7 bits (86), Expect = 0.001
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +2
Query: 32 RESLRXAFESSTSREKMADNKLYEILGVSKNASESEIKRNYHKLAKEFHPDK 187
R SL S TS ++ YEIL + + + ++IKR Y +L K+ HPDK
Sbjct: 12 RNSLWRRAASFTSYSELKSLTPYEILELPRTCTANDIKRKYIELVKKHHPDK 63
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 34.3 bits (75), Expect = 0.024
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +2
Query: 98 YEILGVSKNASESEIKRNYHKLAKEFHPDK---NPAAGDKFKEISYAYEVLSDPKKRQVY 268
Y++L + S +I+ Y K + HPDK NP A D F + A L + K R+
Sbjct: 33 YDVLDILPGMSVDDIRNLYRKKSLMIHPDKNRDNPKAADAFDILKKAESDLVNDKIRESL 92
Query: 269 D 271
D
Sbjct: 93 D 93
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 122 NASESEIKRNYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQV 265
N + + RN H +K HP+ + + + + S LS PK+R V
Sbjct: 600 NKFPNSVSRNTHFESKSPHPNYSRTPHETYSKASSKNVPLSPPKQRVV 647
>SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = -1
Query: 217 FFKFITSCRIFVRV---ELFSKFVVISF 143
FFKF+ +C IF + EL SKF + S+
Sbjct: 100 FFKFLKTCAIFYQTCISELISKFQLDSY 127
>SPBC342.03 |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 456
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/63 (22%), Positives = 26/63 (41%)
Frame = +2
Query: 29 YRESLRXAFESSTSREKMADNKLYEILGVSKNASESEIKRNYHKLAKEFHPDKNPAAGDK 208
Y + F E A+ Y ++ + K+ E + RN+ L K++ NP
Sbjct: 282 YSHDMTPVFSGGLVYEYSAEPNHYGLVVIDKD-DERRVSRNFITLMKQYAKTPNPKGDGG 340
Query: 209 FKE 217
+K+
Sbjct: 341 YKK 343
>SPAC6F6.12 |||autophagy associated protein
Atg24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 401
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 93 NYTRFWAFLKMPANPKLNEITTNLLKSSTRTK 188
NY RF+ K+ KL+EI+ +LL + ++ K
Sbjct: 139 NYVRFFIQPKLNNTSKLDEISDSLLNAFSKLK 170
>SPAC6C3.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 269
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 135 DSLAFLETPKISYNLLSAIFS 73
+SLA+L P+ SYN L+ FS
Sbjct: 116 NSLAYLSKPEESYNFLTIYFS 136
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,912,534
Number of Sequences: 5004
Number of extensions: 55615
Number of successful extensions: 189
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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