Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_A21
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69385-5|CAA93421.1| 130|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U23511-11|AAC46797.1| 123|Caenorhabditis elegans Lc3, gabarap a... 76 4e-14
AF326943-1|AAG49393.1| 123|Caenorhabditis elegans GABA A recept... 76 4e-14
AC024859-2|AAK29971.2| 502|Caenorhabditis elegans Set (trithora... 31 1.5
Z81074-7|CAB03042.1| 495|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical pr... 29 3.4
U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical pr... 29 3.4
U97009-12|ABR92602.1| 532|Caenorhabditis elegans Udp-glucuronos... 29 5.9
U97009-11|AAC69026.1| 533|Caenorhabditis elegans Udp-glucuronos... 29 5.9
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 28 7.8
AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z69385-5|CAA93421.1| 130|Caenorhabditis elegans Hypothetical
protein ZK593.6 protein.
Length = 130
Score = 79.8 bits (188), Expect = 2e-15
Identities = 33/70 (47%), Positives = 50/70 (71%)
Frame = +2
Query: 329 KFLVPEDITMSQFLVIIRNRIRVKPNQALYLIINNRSMLSMSLTMAQAYENYGDEDGFLY 508
KFLVPE IT+++ + I+R R+++ P QA +L++N RSM+S S++M+ Y D DGF+Y
Sbjct: 61 KFLVPEHITVAELMSIVRRRLQLHPQQAFFLLVNERSMVSNSMSMSNLYSQERDPDGFVY 120
Query: 509 ITYASQEVFG 538
+ Y SQ FG
Sbjct: 121 MVYTSQPAFG 130
Score = 58.4 bits (135), Expect = 6e-09
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +2
Query: 569 REVEAIRHRFPNKVPLYVTRYVRDREVPVLGRTKFLVPRNSQCRSFCTL*XQD-EXPRFQ 745
++VE IR + PNKVP+ + R+ +R +P++ R KFLVP + ++ + + Q
Sbjct: 28 KDVEEIRSQQPNKVPVIIERFDGERSLPLMDRCKFLVPEHITVAELMSIVRRRLQLHPQQ 87
Query: 746 ALYLLVNEKVXAXQSMTMAQAYXQFR 823
A +LLVNE+ SM+M+ Y Q R
Sbjct: 88 AFFLLVNERSMVSNSMSMSNLYSQER 113
Score = 41.1 bits (92), Expect = 0.001
Identities = 16/37 (43%), Positives = 28/37 (75%)
Frame = +3
Query: 225 RKEEVMAIKSKFPTKIPLIVERYHKERNLPTLDKKNF 335
R+++V I+S+ P K+P+I+ER+ ER+LP +D+ F
Sbjct: 26 RQKDVEEIRSQQPNKVPVIIERFDGERSLPLMDRCKF 62
>U23511-11|AAC46797.1| 123|Caenorhabditis elegans Lc3, gabarap and
gate-16 familyprotein 1 protein.
Length = 123
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/87 (39%), Positives = 58/87 (66%)
Frame = +2
Query: 299 REKSANTGQKKFLVPEDITMSQFLVIIRNRIRVKPNQALYLIINNRSMLSMSLTMAQAYE 478
+ K + +KK+LVP D+T+ QF +IR RI+++P AL+ +NN +M+ TM Q Y+
Sbjct: 38 KSKLHDLDKKKYLVPSDLTVGQFYFLIRKRIQLRPEDALFFFVNNVIPQTMT-TMGQLYQ 96
Query: 479 NYGDEDGFLYITYASQEVFGYQDDMQE 559
++ +ED FLYI Y+ + V+G + + +E
Sbjct: 97 DHHEEDLFLYIAYSDESVYGGEVEKKE 123
Score = 32.7 bits (71), Expect = 0.36
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 557 EKSNREVEAIRHRFPNKVPLYVTRYVRDREVPVLGRTKFLVPRNSQCRSFCTL*XQDEXP 736
EK E + IR ++P+++P+ V + + + + L + K+LVP + F L +
Sbjct: 12 EKRRAEGDKIRRKYPDRIPVIVEKAPKSK-LHDLDKKKYLVPSDLTVGQFYFLIRKRIQL 70
Query: 737 RFQ-ALYLLVNEKVXAXQSMTMAQAY 811
R + AL+ VN + + TM Q Y
Sbjct: 71 RPEDALFFFVNNVIPQTMT-TMGQLY 95
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 225 RKEEVMAIKSKFPTKIPLIVERYHKERNLPTLDKKNF 335
R+ E I+ K+P +IP+IVE+ K + L LDKK +
Sbjct: 14 RRAEGDKIRRKYPDRIPVIVEKAPKSK-LHDLDKKKY 49
>AF326943-1|AAG49393.1| 123|Caenorhabditis elegans GABA A
receptor-associated protein protein.
Length = 123
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/87 (39%), Positives = 58/87 (66%)
Frame = +2
Query: 299 REKSANTGQKKFLVPEDITMSQFLVIIRNRIRVKPNQALYLIINNRSMLSMSLTMAQAYE 478
+ K + +KK+LVP D+T+ QF +IR RI+++P AL+ +NN +M+ TM Q Y+
Sbjct: 38 KSKLHDLDKKKYLVPSDLTVGQFYFLIRKRIQLRPEDALFFFVNNVIPQTMT-TMGQLYQ 96
Query: 479 NYGDEDGFLYITYASQEVFGYQDDMQE 559
++ +ED FLYI Y+ + V+G + + +E
Sbjct: 97 DHHEEDLFLYIAYSDESVYGGEVEKKE 123
Score = 32.7 bits (71), Expect = 0.36
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 557 EKSNREVEAIRHRFPNKVPLYVTRYVRDREVPVLGRTKFLVPRNSQCRSFCTL*XQDEXP 736
EK E + IR ++P+++P+ V + + + + L + K+LVP + F L +
Sbjct: 12 EKRRAEGDKIRRKYPDRIPVIVEKAPKSK-LHDLDKKKYLVPSDLTVGQFYFLIRKRIQL 70
Query: 737 RFQ-ALYLLVNEKVXAXQSMTMAQAY 811
R + AL+ VN + + TM Q Y
Sbjct: 71 RPEDALFFFVNNVIPQTMT-TMGQLY 95
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 225 RKEEVMAIKSKFPTKIPLIVERYHKERNLPTLDKKNF 335
R+ E I+ K+P +IP+IVE+ K + L LDKK +
Sbjct: 14 RRAEGDKIRRKYPDRIPVIVEKAPKSK-LHDLDKKKY 49
>AC024859-2|AAK29971.2| 502|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 27
protein.
Length = 502
Score = 30.7 bits (66), Expect = 1.5
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 298 KREICQHWTKKIFSPGRYHHVSVFGYHQK 384
K+++ Q + KK++ G HV ++ YH++
Sbjct: 385 KKKLIQKFVKKVYCAGNIFHVDLYNYHEQ 413
>Z81074-7|CAB03042.1| 495|Caenorhabditis elegans Hypothetical
protein F32B6.8b protein.
Length = 495
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 469 SLRKLWG*RWIPLHHLRLSRGVRLPG 546
S++ ++G R+ PLHH ++GV +PG
Sbjct: 12 SVKPVYGARYPPLHHASPTKGVEIPG 37
>Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical
protein T21C9.2 protein.
Length = 1058
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 288 RYHKERNLPTLDKKNF*SRKISPCLSFWLSSETGSESNLTKLYT 419
R +R+ PT++KK F + LS L+ + S S+LT +T
Sbjct: 128 RLTSDRDTPTIEKKKFTLHSFTQNLSAVLADPSRSRSDLTTFFT 171
>U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical
protein F10G2.3 protein.
Length = 417
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -1
Query: 720 SYNVQKLRHCEF-LGTKNFVLPNTGTSRSLTYLVTYSGTLL 601
SYN+ LR F LGT ++V+ G S S + YSGTL+
Sbjct: 343 SYNIL-LRFAPFSLGTSDYVIVYDGESASSPVIGNYSGTLV 382
>U97009-12|ABR92602.1| 532|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform b protein.
Length = 532
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 126 REGIGWSSYNNIDKKYSLPDKFKADIKKVCK 218
RE + S+ ++ + Y +PD FKA I K+ K
Sbjct: 299 RESTVFISFGSVIRSYEMPDNFKAGIIKMFK 329
>U97009-11|AAC69026.1| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform a protein.
Length = 533
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 126 REGIGWSSYNNIDKKYSLPDKFKADIKKVCK 218
RE + S+ ++ + Y +PD FKA I K+ K
Sbjct: 300 RESTVFISFGSVIRSYEMPDNFKAGIIKMFK 330
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +2
Query: 668 KFLVPRNSQCRSFCTL*XQDEXPRFQALYLLVNEKVXAXQSMTMAQAYXQFRSTMATC 841
+ L+ S C CT+ FQ + + + + +T Q Y +ST++TC
Sbjct: 72 RILLSNQSSCPETCTVTLNRYIDTFQGSFSIFSIRFNLIFQVTSQQHYSSTQSTLSTC 129
>AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical
protein C48E7.8 protein.
Length = 820
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = -3
Query: 400 FDSDPVSDDNQKLRHGDIFRD*KFFLSSVGRFLSL*YRSTISGILVGNLLLIAITSSFRI 221
FDS S+DN+ L + + R F S+ +L YR T++ I + N LL+ I S+F +
Sbjct: 264 FDSSGESEDNESLANSSVNRQ---FAPSI----ALTYR-TLATISLSNSLLVNILSAFSV 315
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,925,489
Number of Sequences: 27780
Number of extensions: 369924
Number of successful extensions: 877
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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