Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_A15
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0314 - 33077621-33077869,33078218-33078280,33079392-330794...   142   4e-34
07_01_0604 - 4491884-4491993,4493030-4493225,4494269-4494326,449...   105   4e-23
01_07_0145 + 41449629-41449698,41449785-41449873,41451842-41452255     29   5.0  
02_03_0171 + 15945591-15945681,15947068-15947138,15947715-159478...    28   8.7  

>03_06_0314 -
           33077621-33077869,33078218-33078280,33079392-33079449,
           33079534-33079688,33079797-33080106,33080634-33080890,
           33081280-33081359,33083888-33083948
          Length = 410

 Score =  142 bits (343), Expect = 4e-34
 Identities = 62/69 (89%), Positives = 67/69 (97%)
 Frame = +2

Query: 233 KXHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGAT 412
           + HLRNMIIVPEM+GSIVG+YNGKTFNQVEIKPEMIGHYL EFS++YKPVKHGRPGIGAT
Sbjct: 342 RTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGAT 401

Query: 413 HSSRFIPLK 439
           HSSRFIPLK
Sbjct: 402 HSSRFIPLK 410



 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +3

Query: 144 GLKR*PMALVKQLRRA 191
           GLKR PMAL+K+LR+A
Sbjct: 292 GLKRKPMALIKKLRKA 307


>07_01_0604 -
           4491884-4491993,4493030-4493225,4494269-4494326,
           4494459-4494613,4495092-4495115,4495377-4495489,
           4499943-4500129
          Length = 280

 Score =  105 bits (253), Expect = 4e-23
 Identities = 45/52 (86%), Positives = 50/52 (96%)
 Frame = +2

Query: 233 KXHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 388
           + HLRNMIIVPEM+GSIVG+YNGKTFNQVEIKPEMIGHYL EFS++YKPVKH
Sbjct: 193 RTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKH 244



 Score = 33.9 bits (74), Expect = 0.18
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = +3

Query: 144 GLKR*PMALVKQLRRAKXXAP 206
           GLKR PMAL+K+LR+AK  AP
Sbjct: 164 GLKRKPMALIKKLRKAKKDAP 184


>01_07_0145 + 41449629-41449698,41449785-41449873,41451842-41452255
          Length = 190

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/46 (28%), Positives = 18/46 (39%)
 Frame = +1

Query: 91  CATHGXXCMPVRAGGSLVVLNVNQWHWSSSCVAPXKXLLRNEXPEI 228
           C  +G  C P  +     + +    HWSSS       LLR   P +
Sbjct: 57  CRPYGSRCCPSSSSSPFALRHPRHPHWSSSAAQGLLRLLRASSPHL 102


>02_03_0171 +
           15945591-15945681,15947068-15947138,15947715-15947817,
           15948189-15948328,15948535-15948693,15948775-15948878,
           15950373-15950548,15952643-15952832,15953704-15953803,
           15954171-15954339,15954908-15954990,15955073-15955149,
           15955386-15955557
          Length = 544

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
 Frame = -2

Query: 312 LKVFPL*MPTIEPTISGTMIMFLK*XFHDLWLLISEEPLXW------RDAAA*PMPLVN 154
           +K FP+ + ++   +S  ++ F K  F    L +SE+P         R AAA P+ LVN
Sbjct: 193 MKQFPVNVKSVTEGLSSVLLQFQKPMFSQRMLSLSEDPALMMAFSMARRAAAVPLLLVN 251


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,660,999
Number of Sequences: 37544
Number of extensions: 217435
Number of successful extensions: 333
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 333
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)