Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_A15
         (895 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070991-1|AAL48613.1|  148|Drosophila melanogaster RE08270p pro...   138   9e-33
AE013599-2306|AAM68504.1|  147|Drosophila melanogaster CG8332-PB...   138   9e-33
AE013599-2305|AAF57984.1|  148|Drosophila melanogaster CG8332-PA...   138   9e-33

>AY070991-1|AAL48613.1|  148|Drosophila melanogaster RE08270p
           protein.
          Length = 148

 Score =  138 bits (334), Expect = 9e-33
 Identities = 60/69 (86%), Positives = 65/69 (94%)
 Frame = +2

Query: 233 KXHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGAT 412
           K HLRNMIIVPEM GSI+G+YNGK F QVE+KPEMIGHYLGEF++TYKPVKHGRPGIGAT
Sbjct: 80  KTHLRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGAT 139

Query: 413 HSSRFIPLK 439
           HSSRFIPLK
Sbjct: 140 HSSRFIPLK 148



 Score = 38.3 bits (85), Expect = 0.014
 Identities = 18/33 (54%), Positives = 21/33 (63%)
 Frame = +3

Query: 111 MHXXXXXXXXXGLKR*PMALVKQLRRAKXXAPP 209
           MH         GLKR PMAL+K+LR+AK  APP
Sbjct: 40  MHSRARRRFSRGLKRKPMALIKKLRKAKKEAPP 72


>AE013599-2306|AAM68504.1|  147|Drosophila melanogaster CG8332-PB,
           isoform B protein.
          Length = 147

 Score =  138 bits (334), Expect = 9e-33
 Identities = 60/69 (86%), Positives = 65/69 (94%)
 Frame = +2

Query: 233 KXHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGAT 412
           K HLRNMIIVPEM GSI+G+YNGK F QVE+KPEMIGHYLGEF++TYKPVKHGRPGIGAT
Sbjct: 79  KTHLRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGAT 138

Query: 413 HSSRFIPLK 439
           HSSRFIPLK
Sbjct: 139 HSSRFIPLK 147



 Score = 38.3 bits (85), Expect = 0.014
 Identities = 18/33 (54%), Positives = 21/33 (63%)
 Frame = +3

Query: 111 MHXXXXXXXXXGLKR*PMALVKQLRRAKXXAPP 209
           MH         GLKR PMAL+K+LR+AK  APP
Sbjct: 39  MHSRARRRFSRGLKRKPMALIKKLRKAKKEAPP 71


>AE013599-2305|AAF57984.1|  148|Drosophila melanogaster CG8332-PA,
           isoform A protein.
          Length = 148

 Score =  138 bits (334), Expect = 9e-33
 Identities = 60/69 (86%), Positives = 65/69 (94%)
 Frame = +2

Query: 233 KXHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGAT 412
           K HLRNMIIVPEM GSI+G+YNGK F QVE+KPEMIGHYLGEF++TYKPVKHGRPGIGAT
Sbjct: 80  KTHLRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGAT 139

Query: 413 HSSRFIPLK 439
           HSSRFIPLK
Sbjct: 140 HSSRFIPLK 148



 Score = 38.3 bits (85), Expect = 0.014
 Identities = 18/33 (54%), Positives = 21/33 (63%)
 Frame = +3

Query: 111 MHXXXXXXXXXGLKR*PMALVKQLRRAKXXAPP 209
           MH         GLKR PMAL+K+LR+AK  APP
Sbjct: 40  MHSRARRRFSRGLKRKPMALIKKLRKAKKEAPP 72


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,939,157
Number of Sequences: 53049
Number of extensions: 360236
Number of successful extensions: 664
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)