Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_A14
(893 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209731-1|BAD92968.1| 754|Homo sapiens Glucan , branching enzy... 260 6e-69
L07956-1|AAA58642.1| 702|Homo sapiens 1,4-alpha-glucan branchin... 259 8e-69
BC012098-1|AAH12098.1| 702|Homo sapiens glucan (1,4-alpha-), br... 258 2e-68
AL021937-10|CAI19585.1| 507|Homo sapiens bactericidal/permeabil... 31 7.5
AF465766-1|AAM73984.1| 507|Homo sapiens bactericidal/permeabili... 31 7.5
>AB209731-1|BAD92968.1| 754|Homo sapiens Glucan , branching enzyme
1 variant protein.
Length = 754
Score = 260 bits (636), Expect = 6e-69
Identities = 124/249 (49%), Positives = 162/249 (65%), Gaps = 5/249 (2%)
Frame = +2
Query: 104 AQXFESAGXLKPYASAISRSXACYKXIWXRIESWDGGLEAFTKGYKYYGPQFNQDGSVTW 283
A+ E LKPYA R + I I +GG++ F++GY+ +G DG +
Sbjct: 81 ARLLEIDPYLKPYAVDFQRRYKQFSQILKNIGENEGGIDKFSRGYESFGVHRCADGGLYC 140
Query: 284 REWAPGAHSLHLRGEFNGWDSKSHPFAKKEYGKWEIQIPANPDGSCALKHDSRVQIIVND 463
+EWAPGA + L G+FNGW+ S+P+ K +YGKWE+ IP + S + H S++++++
Sbjct: 141 KEWAPGAEGVFLTGDFNGWNPFSYPYKKLDYGKWELYIPPKQNKSVLVPHGSKLKVVITS 200
Query: 464 N----LYRISPWASYV-KPHEGFTYQHFIYKPEQPYKFKHPKVDKPRSLRIYECHVGIAT 628
LYRISPWA YV + + Y + PE Y+FKH + KPRSLRIYE HVGI++
Sbjct: 201 KSGEILYRISPWAKYVVREGDNVNYDWIHWDPEHSYEFKHSRPKKPRSLRIYESHVGISS 260
Query: 629 SEGKVGSYNEFRENVLPRIKKQGYNAIQIMAIKEHAYYASFGYQVTSFFAASSRYGTPCE 808
EGKV SY F NVLPRIK GYN IQ+MAI EHAYYASFGYQ+TSFFAASSRYGTP E
Sbjct: 261 HEGKVASYKHFTCNVLPRIKGLGYNCIQLMAIMEHAYYASFGYQITSFFAASSRYGTPEE 320
Query: 809 LKQLIXRAH 835
L++L+ AH
Sbjct: 321 LQELVDTAH 329
>L07956-1|AAA58642.1| 702|Homo sapiens 1,4-alpha-glucan branching
enzyme protein.
Length = 702
Score = 259 bits (635), Expect = 8e-69
Identities = 124/249 (49%), Positives = 162/249 (65%), Gaps = 5/249 (2%)
Frame = +2
Query: 104 AQXFESAGXLKPYASAISRSXACYKXIWXRIESWDGGLEAFTKGYKYYGPQFNQDGSVTW 283
A+ E LKPYA R + I I +GG++ F++GY+ +G DG +
Sbjct: 29 ARLLEIDPYLKPYAVDFQRRYKQFSQILKNIGENEGGIDKFSRGYESFGVHRCADGGLYS 88
Query: 284 REWAPGAHSLHLRGEFNGWDSKSHPFAKKEYGKWEIQIPANPDGSCALKHDSRVQIIVND 463
+EWAPGA + L G+FNGW+ S+P+ K +YGKWE+ IP + S + H S++++++
Sbjct: 89 KEWAPGAEGVFLTGDFNGWNPFSYPYKKLDYGKWELYIPPKQNKSVLVPHGSKLKVVITS 148
Query: 464 N----LYRISPWASYV-KPHEGFTYQHFIYKPEQPYKFKHPKVDKPRSLRIYECHVGIAT 628
LYRISPWA YV + + Y + PE Y+FKH + KPRSLRIYE HVGI++
Sbjct: 149 KSGEILYRISPWAKYVVREGDNVNYDWIHWDPEHSYEFKHSRPKKPRSLRIYESHVGISS 208
Query: 629 SEGKVGSYNEFRENVLPRIKKQGYNAIQIMAIKEHAYYASFGYQVTSFFAASSRYGTPCE 808
EGKV SY F NVLPRIK GYN IQ+MAI EHAYYASFGYQ+TSFFAASSRYGTP E
Sbjct: 209 HEGKVASYKHFTCNVLPRIKGLGYNCIQLMAIMEHAYYASFGYQITSFFAASSRYGTPEE 268
Query: 809 LKQLIXRAH 835
L++L+ AH
Sbjct: 269 LQELVDTAH 277
>BC012098-1|AAH12098.1| 702|Homo sapiens glucan (1,4-alpha-),
branching enzyme 1 (glycogen branching enzyme, Andersen
di protein.
Length = 702
Score = 258 bits (632), Expect = 2e-68
Identities = 123/249 (49%), Positives = 162/249 (65%), Gaps = 5/249 (2%)
Frame = +2
Query: 104 AQXFESAGXLKPYASAISRSXACYKXIWXRIESWDGGLEAFTKGYKYYGPQFNQDGSVTW 283
A+ E LKPYA R + I I +GG++ F++GY+ +G DG +
Sbjct: 29 ARLLEIDPYLKPYAVDFQRRYKQFSQILKNIGENEGGIDKFSRGYESFGVHRCADGGLYC 88
Query: 284 REWAPGAHSLHLRGEFNGWDSKSHPFAKKEYGKWEIQIPANPDGSCALKHDSRVQIIVND 463
+EWAPGA + L G+FNGW+ S+P+ K +YGKWE+ IP + S + H S++++++
Sbjct: 89 KEWAPGAEGVFLTGDFNGWNPFSYPYKKLDYGKWELYIPPKQNKSVLVPHGSKLKVVITS 148
Query: 464 N----LYRISPWASYV-KPHEGFTYQHFIYKPEQPYKFKHPKVDKPRSLRIYECHVGIAT 628
LYRISPWA YV + + Y + PE Y+FKH + KPRSLRIYE HVGI++
Sbjct: 149 KSGEILYRISPWAKYVVREGDNVNYDWIHWDPEHSYEFKHSRPKKPRSLRIYESHVGISS 208
Query: 629 SEGKVGSYNEFRENVLPRIKKQGYNAIQIMAIKEHAYYASFGYQVTSFFAASSRYGTPCE 808
EGKV SY F NVLPRIK GYN IQ+MAI EHAYYASFGYQ+TSFFAASSRYG+P E
Sbjct: 209 HEGKVASYKHFTCNVLPRIKGLGYNCIQLMAIMEHAYYASFGYQITSFFAASSRYGSPEE 268
Query: 809 LKQLIXRAH 835
L++L+ AH
Sbjct: 269 LQELVDTAH 277
>AL021937-10|CAI19585.1| 507|Homo sapiens
bactericidal/permeability-increasing protein-likeunit 8
protein.
Length = 507
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 525 NILFISQNSPTNSSIQR*TSQGLFASTSVTLV*QRPRVKWALTTSSARTSCPES-RNRVT 701
+I+ ++Q P NS+++ S ASTSV LV R+ +L+ + R + PES R+ +
Sbjct: 363 SIMMLTQ--PKNSTVETIVSMDFVASTSVGLVILGQRLVCSLSLNRFRLALPESNRSNIE 420
Query: 702 ML 707
+L
Sbjct: 421 VL 422
>AF465766-1|AAM73984.1| 507|Homo sapiens
bactericidal/permeability-increasing protein-like 2
protein.
Length = 507
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 525 NILFISQNSPTNSSIQR*TSQGLFASTSVTLV*QRPRVKWALTTSSARTSCPES-RNRVT 701
+I+ ++Q P NS+++ S ASTSV LV R+ +L+ + R + PES R+ +
Sbjct: 363 SIMMLTQ--PKNSTVETIVSMDFVASTSVGLVILGQRLVCSLSLNRFRLALPESNRSNIE 420
Query: 702 ML 707
+L
Sbjct: 421 VL 422
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,428,074
Number of Sequences: 237096
Number of extensions: 2889346
Number of successful extensions: 5076
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5070
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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