Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_A12
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88184-8|AAK31515.1| 301|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 29 3.3
U88184-6|AAK95875.1| 130|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 5.8
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 5.8
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 29 5.8
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 29 5.8
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 29 5.8
AF025453-6|AAM98051.1| 288|Caenorhabditis elegans Hypothetical ... 29 5.8
>U88184-8|AAK31515.1| 301|Caenorhabditis elegans Hypothetical
protein F36H5.4 protein.
Length = 301
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 133 VPMAYCGFVHPSGKRYSFSGTTLSAGHCFKNITVTPEDDGEW 258
+PM Y F+ + + +FSG +G +K + E GEW
Sbjct: 243 IPMFYEAFLAYNSEELAFSGVEPESGRLWKGVCRWNEKSGEW 284
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.5 bits (63), Expect = 3.3
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 8/118 (6%)
Frame = +3
Query: 549 NYKQCEIRRLRHVDVRCRTRRWKRTH*YYKCKSKRNLHHVVRSRSWYHDSVHSDNRINRI 728
N K+ E +R R+ R RTR +RT + K RSRS + S SD+ +R
Sbjct: 214 NPKKDEHKRNRNRRSRSRTRSRERTSRRSRSKESPRSKRSRRSRSSSNSSSESDSSSSRS 273
Query: 729 SRPGRDASFWAARRDRRPSRXTSWNPYRA-------TRRGEAMLMFPKSESYL-RLKQ 878
S + +R R R S N + + +R +M K ++YL RLK+
Sbjct: 274 SSYSSRSRSRTPQRSRTSKRRRS-NSHASEDSDDAREKRAFKQMMLDKKQAYLARLKR 330
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.5 bits (63), Expect = 3.3
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 8/118 (6%)
Frame = +3
Query: 549 NYKQCEIRRLRHVDVRCRTRRWKRTH*YYKCKSKRNLHHVVRSRSWYHDSVHSDNRINRI 728
N K+ E +R R+ R RTR +RT + K RSRS + S SD+ +R
Sbjct: 214 NPKKDEHKRNRNRRSRSRTRSRERTSRRSRSKESPRSKRSRRSRSSSNSSSESDSSSSRS 273
Query: 729 SRPGRDASFWAARRDRRPSRXTSWNPYRA-------TRRGEAMLMFPKSESYL-RLKQ 878
S + +R R R S N + + +R +M K ++YL RLK+
Sbjct: 274 SSYSSRSRSRTPQRSRTSKRRRS-NSHASEDSDDAREKRAFKQMMLDKKQAYLARLKR 330
>U88184-6|AAK95875.1| 130|Caenorhabditis elegans Hypothetical
protein F36H5.10 protein.
Length = 130
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +1
Query: 133 VPMAYCGFVHPSGKRYSFSGTTLSAGHCFKNITVTPEDDGEW 258
+P+ Y F+ + + ++FSG ++G + + E GEW
Sbjct: 76 IPIVYVAFLAYNSEEFAFSGLEPTSGRFWHGVYKRIEKSGEW 117
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 520 MSLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKG 654
+S G C++ I N + DD GT+T A D G + ++ + V+ KG
Sbjct: 6226 VSFRSGVCSLEIFNARVDDAGTYTVTATNDLGVDVSECVLTVQTKG 6271
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 520 MSLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKG 654
+S G C++ I N + DD GT+T A D G + ++ + V+ KG
Sbjct: 6755 VSFRSGVCSLEIFNARVDDAGTYTVTATNDLGVDVSECVLTVQTKG 6800
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 520 MSLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKG 654
+S G C++ I N + DD GT+T A D G + ++ + V+ KG
Sbjct: 6436 VSFRSGVCSLEIFNARVDDAGTYTVTATNDLGVDVSECVLTVQTKG 6481
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 520 MSLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKG 654
+S G C++ I N + DD GT+T A D G + ++ + V+ KG
Sbjct: 6226 VSFRSGVCSLEIFNARVDDAGTYTVTATNDLGVDVSECVLTVQTKG 6271
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 520 MSLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKG 654
+S G C++ I N + DD GT+T A D G + ++ + V+ KG
Sbjct: 6755 VSFRSGVCSLEIFNARVDDAGTYTVTATNDLGVDVSECVLTVQTKG 6800
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 520 MSLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKG 654
+S G C++ I N + DD GT+T A D G + ++ + V+ KG
Sbjct: 6436 VSFRSGVCSLEIFNARVDDAGTYTVTATNDLGVDVSECVLTVQTKG 6481
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 520 MSLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKG 654
+S G C++ I N + DD GT+T A D G + ++ + V+ KG
Sbjct: 5645 VSFRSGVCSLEIFNARVDDAGTYTVTATNDLGVDVSECVLTVQTKG 5690
>AF025453-6|AAM98051.1| 288|Caenorhabditis elegans Hypothetical
protein C08F1.10 protein.
Length = 288
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 133 VPMAYCGFVHPSGKRYSFSGTTLSAGHCFKNITVTPEDDGEW 258
+PM Y F+ + + ++FSG ++G + + E GEW
Sbjct: 230 IPMIYVAFLAYNSEEFAFSGKEPTSGRFWYGVCRWNEKLGEW 271
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,450,363
Number of Sequences: 27780
Number of extensions: 390940
Number of successful extensions: 1189
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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