Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_A10
         (921 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0496 + 22728097-22728401,22728506-22728670,22728771-22729041     33   0.32 
07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708     28   9.1  

>01_05_0496 + 22728097-22728401,22728506-22728670,22728771-22729041
          Length = 246

 Score = 33.1 bits (72), Expect = 0.32
 Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 3/95 (3%)
 Frame = -1

Query: 876 GGGRTXXRXWXTXQXGXMRKGPTXXPXGRKGGTGXPVNXQGSEXXGRTEG---AXQGGNA 706
           GGGR   R       G M +GP     G   G G P +  GS+   +T         G  
Sbjct: 83  GGGREQSRREAAVNLGKMDRGPAPVSGGAATG-GVPRSKNGSKIAFKTRSEVDVLDDGYR 141

Query: 705 WYXYSPVGXRHL*XERRFL*CSXRGAEPMEKRQQR 601
           W  Y     ++    R +  CS  G   ++KR +R
Sbjct: 142 WRKYGKKMVKNSPNPRNYYRCSSEGCR-VKKRVER 175


>07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708
          Length = 2033

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +3

Query: 645  ITKIDAQXXGGEXRQDYKXTRRFPPXKXPRCAPXV 749
            IT +D    GG  R      +R PP +  RC   +
Sbjct: 1465 ITTVDVNETGGGARSSLSFRQRMPPPRLQRCVSGI 1499


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,811,250
Number of Sequences: 37544
Number of extensions: 221729
Number of successful extensions: 430
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)