Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_A09
(893 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41745-1|AAC50462.1| 181|Homo sapiens PDGF associated protein p... 48 6e-05
BC007873-1|AAH07873.1| 181|Homo sapiens PDGFA associated protei... 48 6e-05
BC000684-1|AAH00684.1| 181|Homo sapiens PDGFA associated protei... 48 6e-05
AC004922-1|AAF03506.1| 181|Homo sapiens unknown protein. 48 6e-05
U65960-1|AAB07135.1| 171|Homo sapiens HASPP28 protein. 45 3e-04
U90920-1|AAB81012.1| 1261|Homo sapiens PTPL1-associated RhoGAP p... 31 5.6
BC093767-1|AAH93767.1| 1261|Homo sapiens Rho GTPase activating p... 31 5.6
BC093741-1|AAH93741.1| 1261|Homo sapiens Rho GTPase activating p... 31 5.6
BC067839-1|AAH67839.1| 411|Homo sapiens ARHGAP29 protein protein. 31 5.6
BC022483-1|AAH22483.1| 393|Homo sapiens ARHGAP29 protein protein. 31 5.6
AL162735-2|CAH71751.1| 393|Homo sapiens Rho GTPase activating p... 31 5.6
AL162735-1|CAH71750.1| 1261|Homo sapiens Rho GTPase activating p... 31 5.6
AB208873-1|BAD92110.1| 1252|Homo sapiens PTPL1-associated RhoGAP... 31 5.6
>U41745-1|AAC50462.1| 181|Homo sapiens PDGF associated protein
protein.
Length = 181
Score = 47.6 bits (108), Expect = 6e-05
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 2/123 (1%)
Frame = +3
Query: 213 KFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXXXXXXXXX--HPTKAK 386
++TSPEE++ Q + ++QK + +EQ + K K
Sbjct: 16 QYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDSDESEDEEDDYQQKRK 75
Query: 387 GVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXXXXXXXXYQKLHAEGK 566
GV GLI++ENPNRV G E LS Y K+H GK
Sbjct: 76 GVEGLIDIENPNRVAQTTKKVTQLDLDGPKE---LSRREREEIEKQKAKERYMKMHLAGK 132
Query: 567 TEQ 575
TEQ
Sbjct: 133 TEQ 135
>BC007873-1|AAH07873.1| 181|Homo sapiens PDGFA associated protein 1
protein.
Length = 181
Score = 47.6 bits (108), Expect = 6e-05
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 2/123 (1%)
Frame = +3
Query: 213 KFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXXXXXXXXX--HPTKAK 386
++TSPEE++ Q + ++QK + +EQ + K K
Sbjct: 16 QYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDSDESEDEEDDYQQKRK 75
Query: 387 GVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXXXXXXXXYQKLHAEGK 566
GV GLI++ENPNRV G E LS Y K+H GK
Sbjct: 76 GVEGLIDIENPNRVAQTTKKVTQLDLDGPKE---LSRREREEIEKQKAKERYMKMHLAGK 132
Query: 567 TEQ 575
TEQ
Sbjct: 133 TEQ 135
>BC000684-1|AAH00684.1| 181|Homo sapiens PDGFA associated protein 1
protein.
Length = 181
Score = 47.6 bits (108), Expect = 6e-05
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 2/123 (1%)
Frame = +3
Query: 213 KFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXXXXXXXXX--HPTKAK 386
++TSPEE++ Q + ++QK + +EQ + K K
Sbjct: 16 QYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDSDESEDEEDDYQQKRK 75
Query: 387 GVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXXXXXXXXYQKLHAEGK 566
GV GLI++ENPNRV G E LS Y K+H GK
Sbjct: 76 GVEGLIDIENPNRVAQTTKKVTQLDLDGPKE---LSRREREEIEKQKAKERYMKMHLAGK 132
Query: 567 TEQ 575
TEQ
Sbjct: 133 TEQ 135
>AC004922-1|AAF03506.1| 181|Homo sapiens unknown protein.
Length = 181
Score = 47.6 bits (108), Expect = 6e-05
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 2/123 (1%)
Frame = +3
Query: 213 KFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXXXXXXXXX--HPTKAK 386
++TSPEE++ Q + ++QK + +EQ + K K
Sbjct: 16 QYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDSDESEDEEDDYQQKRK 75
Query: 387 GVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXXXXXXXXYQKLHAEGK 566
GV GLI++ENPNRV G E LS Y K+H GK
Sbjct: 76 GVEGLIDIENPNRVAQTTKKVTQLDLDGPKE---LSRREREEIEKQKAKERYMKMHLAGK 132
Query: 567 TEQ 575
TEQ
Sbjct: 133 TEQ 135
>U65960-1|AAB07135.1| 171|Homo sapiens HASPP28 protein.
Length = 171
Score = 45.2 bits (102), Expect = 3e-04
Identities = 33/123 (26%), Positives = 47/123 (38%), Gaps = 2/123 (1%)
Frame = +3
Query: 213 KFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXXXXXXXXX--HPTKAK 386
++TSPEE++ Q + ++QK + +EQ + K K
Sbjct: 17 QYTSPEEIDTQLQSEKQKAREEEEQKEGGDGAAGDPKKEKKSLDSDESEDEDDDYQQKRK 76
Query: 387 GVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXXXXXXXXYQKLHAEGK 566
GV G I++ENPNRV G E LS Y ++H GK
Sbjct: 77 GVEGFIDIENPNRVAQTTKKVTQLDLDGPKE---LSRREREEIEKQKAKERYMRMHLAGK 133
Query: 567 TEQ 575
TEQ
Sbjct: 134 TEQ 136
>U90920-1|AAB81012.1| 1261|Homo sapiens PTPL1-associated RhoGAP
protein.
Length = 1261
Score = 31.1 bits (67), Expect = 5.6
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +3
Query: 114 KYLNILSLFKVRSLNKIIKCHAVNLLTTRVVTSKFTSP-----EELEEQRKHDEQKKKWR 278
+++ + SLF LN I H + + +KF P E+E+QRK E K+ W+
Sbjct: 255 EFMPLQSLFTNALLNDIESSHLLQQTIAALQANKFVQPLLGRKNEMEKQRK--EIKELWK 312
Query: 279 KEQ 287
+EQ
Sbjct: 313 QEQ 315
>BC093767-1|AAH93767.1| 1261|Homo sapiens Rho GTPase activating
protein 29 protein.
Length = 1261
Score = 31.1 bits (67), Expect = 5.6
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +3
Query: 114 KYLNILSLFKVRSLNKIIKCHAVNLLTTRVVTSKFTSP-----EELEEQRKHDEQKKKWR 278
+++ + SLF LN I H + + +KF P E+E+QRK E K+ W+
Sbjct: 255 EFMPLQSLFTNALLNDIESSHLLQQTIAALQANKFVQPLLGRKNEMEKQRK--EIKELWK 312
Query: 279 KEQ 287
+EQ
Sbjct: 313 QEQ 315
>BC093741-1|AAH93741.1| 1261|Homo sapiens Rho GTPase activating
protein 29 protein.
Length = 1261
Score = 31.1 bits (67), Expect = 5.6
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +3
Query: 114 KYLNILSLFKVRSLNKIIKCHAVNLLTTRVVTSKFTSP-----EELEEQRKHDEQKKKWR 278
+++ + SLF LN I H + + +KF P E+E+QRK E K+ W+
Sbjct: 255 EFMPLQSLFTNALLNDIESSHLLQQTIAALQANKFVQPLLGRKNEMEKQRK--EIKELWK 312
Query: 279 KEQ 287
+EQ
Sbjct: 313 QEQ 315
>BC067839-1|AAH67839.1| 411|Homo sapiens ARHGAP29 protein protein.
Length = 411
Score = 31.1 bits (67), Expect = 5.6
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +3
Query: 114 KYLNILSLFKVRSLNKIIKCHAVNLLTTRVVTSKFTSP-----EELEEQRKHDEQKKKWR 278
+++ + SLF LN I H + + +KF P E+E+QRK E K+ W+
Sbjct: 255 EFMPLQSLFTNALLNDIESSHLLQQTIAALQANKFVQPLLGRKNEMEKQRK--EIKELWK 312
Query: 279 KEQ 287
+EQ
Sbjct: 313 QEQ 315
>BC022483-1|AAH22483.1| 393|Homo sapiens ARHGAP29 protein protein.
Length = 393
Score = 31.1 bits (67), Expect = 5.6
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +3
Query: 114 KYLNILSLFKVRSLNKIIKCHAVNLLTTRVVTSKFTSP-----EELEEQRKHDEQKKKWR 278
+++ + SLF LN I H + + +KF P E+E+QRK E K+ W+
Sbjct: 255 EFMPLQSLFTNALLNDIESSHLLQQTIAALQANKFVQPLLGRKNEMEKQRK--EIKELWK 312
Query: 279 KEQ 287
+EQ
Sbjct: 313 QEQ 315
>AL162735-2|CAH71751.1| 393|Homo sapiens Rho GTPase activating
protein 29 protein.
Length = 393
Score = 31.1 bits (67), Expect = 5.6
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +3
Query: 114 KYLNILSLFKVRSLNKIIKCHAVNLLTTRVVTSKFTSP-----EELEEQRKHDEQKKKWR 278
+++ + SLF LN I H + + +KF P E+E+QRK E K+ W+
Sbjct: 255 EFMPLQSLFTNALLNDIESSHLLQQTIAALQANKFVQPLLGRKNEMEKQRK--EIKELWK 312
Query: 279 KEQ 287
+EQ
Sbjct: 313 QEQ 315
>AL162735-1|CAH71750.1| 1261|Homo sapiens Rho GTPase activating
protein 29 protein.
Length = 1261
Score = 31.1 bits (67), Expect = 5.6
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +3
Query: 114 KYLNILSLFKVRSLNKIIKCHAVNLLTTRVVTSKFTSP-----EELEEQRKHDEQKKKWR 278
+++ + SLF LN I H + + +KF P E+E+QRK E K+ W+
Sbjct: 255 EFMPLQSLFTNALLNDIESSHLLQQTIAALQANKFVQPLLGRKNEMEKQRK--EIKELWK 312
Query: 279 KEQ 287
+EQ
Sbjct: 313 QEQ 315
>AB208873-1|BAD92110.1| 1252|Homo sapiens PTPL1-associated RhoGAP 1
variant protein.
Length = 1252
Score = 31.1 bits (67), Expect = 5.6
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +3
Query: 114 KYLNILSLFKVRSLNKIIKCHAVNLLTTRVVTSKFTSP-----EELEEQRKHDEQKKKWR 278
+++ + SLF LN I H + + +KF P E+E+QRK E K+ W+
Sbjct: 246 EFMPLQSLFTNALLNDIESSHLLQQTIAALQANKFVQPLLGRKNEMEKQRK--EIKELWK 303
Query: 279 KEQ 287
+EQ
Sbjct: 304 QEQ 306
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,297,169
Number of Sequences: 237096
Number of extensions: 898681
Number of successful extensions: 2061
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2049
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -