Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_A07
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0902 - 25806912-25807190,25807876-25808094,25809469-258097...    29   3.8  
01_07_0124 + 41212728-41212922,41215156-41215210,41215336-412171...    29   3.8  

>06_03_0902 -
           25806912-25807190,25807876-25808094,25809469-25809711,
           25809810-25809974,25810141-25810721,25810940-25811048,
           25811158-25811250,25811474-25811535,25811895-25811967,
           25812879-25813007,25814107-25814229
          Length = 691

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 11/46 (23%), Positives = 26/46 (56%)
 Frame = +3

Query: 372 VDRRTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLGQFD 509
           +++  K  +  +      +K+ +L++ E T ++ VE   QH+G+F+
Sbjct: 443 IEQNEKTRVQSEKTTASGEKEMLLEELE-TKRKEVESLQQHIGEFE 487


>01_07_0124 +
           41212728-41212922,41215156-41215210,41215336-41217128,
           41217363-41217521,41217883-41218054,41218173-41218471,
           41219060-41219368
          Length = 993

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = +3

Query: 369 NVDRRTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLGQFDRAL*YSKSLLGLN 548
           ++D+R++AE   + +QEK++    +QKA +     V K    L +  R   +S S   L 
Sbjct: 50  DLDKRSQAETQRRKIQEKLRVALFVQKAALQFIDAVRKTEHPLPELARQCGFSVSAEELA 109

Query: 549 KIM 557
            I+
Sbjct: 110 SIV 112


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,359,940
Number of Sequences: 37544
Number of extensions: 229616
Number of successful extensions: 421
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)