Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_A07
         (892 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017286-1|AAH17286.1|  112|Homo sapiens family with sequence si...    60   8e-09
BC004447-1|AAH04447.1|   69|Homo sapiens FAM32A protein protein.       60   8e-09
BC000639-1|AAH00639.1|  112|Homo sapiens family with sequence si...    60   8e-09
AF151902-1|AAD34139.1|  112|Homo sapiens CGI-144 protein protein.      60   8e-09

>BC017286-1|AAH17286.1|  112|Homo sapiens family with sequence
           similarity 32, member A protein.
          Length = 112

 Score = 60.5 bits (140), Expect = 8e-09
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = +3

Query: 372 VDRRTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHL 497
           +D+RT A+ A++ MQEK Q +RIL+KA  THKQRVE FN+HL
Sbjct: 55  LDKRTPAQAAFEKMQEKRQMERILKKASKTHKQRVEDFNRHL 96



 Score = 35.1 bits (77), Expect = 0.34
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +1

Query: 496 LDSLTEHFDIPKVSW 540
           LD+LTEH+DIPKVSW
Sbjct: 96  LDTLTEHYDIPKVSW 110


>BC004447-1|AAH04447.1|   69|Homo sapiens FAM32A protein protein.
          Length = 69

 Score = 60.5 bits (140), Expect = 8e-09
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = +3

Query: 372 VDRRTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHL 497
           +D+RT A+ A++ MQEK Q +RIL+KA  THKQRVE FN+HL
Sbjct: 12  LDKRTPAQAAFEKMQEKRQMERILKKASKTHKQRVEDFNRHL 53



 Score = 35.1 bits (77), Expect = 0.34
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +1

Query: 496 LDSLTEHFDIPKVSW 540
           LD+LTEH+DIPKVSW
Sbjct: 53  LDTLTEHYDIPKVSW 67


>BC000639-1|AAH00639.1|  112|Homo sapiens family with sequence
           similarity 32, member A protein.
          Length = 112

 Score = 60.5 bits (140), Expect = 8e-09
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = +3

Query: 372 VDRRTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHL 497
           +D+RT A+ A++ MQEK Q +RIL+KA  THKQRVE FN+HL
Sbjct: 55  LDKRTPAQAAFEKMQEKRQMERILKKASKTHKQRVEDFNRHL 96



 Score = 35.1 bits (77), Expect = 0.34
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +1

Query: 496 LDSLTEHFDIPKVSW 540
           LD+LTEH+DIPKVSW
Sbjct: 96  LDTLTEHYDIPKVSW 110


>AF151902-1|AAD34139.1|  112|Homo sapiens CGI-144 protein protein.
          Length = 112

 Score = 60.5 bits (140), Expect = 8e-09
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = +3

Query: 372 VDRRTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHL 497
           +D+RT A+ A++ MQEK Q +RIL+KA  THKQRVE FN+HL
Sbjct: 55  LDKRTPAQAAFEKMQEKRQMERILKKASKTHKQRVEDFNRHL 96



 Score = 35.1 bits (77), Expect = 0.34
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +1

Query: 496 LDSLTEHFDIPKVSW 540
           LD+LTEH+DIPKVSW
Sbjct: 96  LDTLTEHYDIPKVSW 110


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,117,288
Number of Sequences: 237096
Number of extensions: 1393461
Number of successful extensions: 2118
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2118
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)