Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_P22
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0367 - 16840732-16843428,16844425-16844760                       31   1.2  
02_02_0667 + 12765759-12765787,12766644-12766732,12766967-127670...    30   2.1  
12_01_1059 - 10934937-10935446,10938224-10938271,10938383-109386...    29   3.7  
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989...    29   3.7  
07_01_0355 + 2597592-2598280,2599150-2599426                           29   4.9  
04_04_0190 - 23442824-23442846,23442891-23442949,23443613-234437...    29   4.9  
08_01_1032 + 10447474-10448030,10448784-10449813                       28   8.6  
01_01_0863 - 6724200-6724414,6726300-6726576,6726976-6727145,672...    28   8.6  

>11_04_0367 - 16840732-16843428,16844425-16844760
          Length = 1010

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
 Frame = +3

Query: 393 RAKFHSNGYGLAPVSLLNQSNETQTK--RLVQQYDELKAE----GIPEDEIIEKAAQAV- 551
           R +   NG  L+ V L+  SNE  TK   L+Q++DE+K       I +++ + + A  + 
Sbjct: 108 RKRHQVNGEHLSEVGLVPVSNELATKARELIQRFDEMKVYYKYFSISDNDGVRRTAPGIE 167

Query: 552 AVERHSYAAQKLNVTPKNPD 611
            V   SY   K ++  +  D
Sbjct: 168 CVRPTSYFVVKESIVGRESD 187


>02_02_0667 +
           12765759-12765787,12766644-12766732,12766967-12767065,
           12769131-12769304,12769376-12769590,12769746-12769835,
           12770744-12770905
          Length = 285

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 230 GKYCTNSFQSATGHVKKFFLKLLARLIYV 144
           G  C  +F S  G+ +KFFLK+ A   YV
Sbjct: 71  GTVCNLNFSSLLGYREKFFLKIYAAAFYV 99


>12_01_1059 -
           10934937-10935446,10938224-10938271,10938383-10938619,
           10938711-10938747,10941018-10941286
          Length = 366

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +3

Query: 195 SSRLERIGTIFTRVEGLLSRGAMKPDDRPLWFDVYKAFPPITEPKYARPNLVV 353
           +SRL R+  +      L     M P  R  WFD+YK    I  P+   P L++
Sbjct: 146 ASRLHRLRAVVLHSPILSGLRVMYPVKRTYWFDIYKNIDKI--PQVTCPVLII 196


>01_06_0124 -
           26692731-26697046,26698749-26698827,26698899-26698955,
           26699321-26699416
          Length = 1515

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
 Frame = +3

Query: 450 SNETQTKRLVQQYDELKAEGIPEDEII---EKAAQAVAVERHSYAAQKLNVTPKNPDSVT 620
           S  T+ K L++   +LK  G+  D++I   E+   ++ +ER + A +K  +  K+   +T
Sbjct: 382 STLTEEKHLLES--KLKLLGVEIDDLIAEKEELMNSMNIERGAAAEEKEMLVSKHSKCLT 439

Query: 621 AQVLAEADIKNIFTTN 668
               A++ +K + +TN
Sbjct: 440 ELEKAQSSVKELESTN 455


>07_01_0355 + 2597592-2598280,2599150-2599426
          Length = 321

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -3

Query: 268 GFIAPRLRRPSTLVNIV 218
           GFIA RLRRPSTL+ ++
Sbjct: 3   GFIAGRLRRPSTLLTVL 19


>04_04_0190 -
           23442824-23442846,23442891-23442949,23443613-23443737,
           23443767-23443901,23444195-23444301,23444488-23444566,
           23444856-23444942,23445045-23445281,23445783-23446128,
           23446486-23446694
          Length = 468

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -2

Query: 281 GSVIRFHCSSAKKTFNSGKYCTNSFQSATGHVKKFFLKLLARLIYVS 141
           GS +  HCS   + F S  +CT +  S    +  F L+   RL   S
Sbjct: 61  GSFLEDHCSRYGRVFKSHLFCTPTIVSCDQELNHFILQNEERLFQCS 107


>08_01_1032 + 10447474-10448030,10448784-10449813
          Length = 528

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +3

Query: 468 KRLVQQYDELKAEGIPEDEIIEKAAQA--VAVERHSYAAQKLNVTPK 602
           +R ++ YDE+K  G   D  +EK  +   +A   H   A K N+ P+
Sbjct: 470 QRALEYYDEMKENGFASDPKLEKEFRTFLLANRDHWRGAGKYNIIPQ 516


>01_01_0863 -
           6724200-6724414,6726300-6726576,6726976-6727145,
           6727250-6727526
          Length = 312

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +3

Query: 189 MASSRLERIGTIFTRVEGLLSRGAMKPDDRPLWFDVYKAFPPITEPKY 332
           +AS  + R   IF+  + L   G     + P+ FD Y  F P+T P Y
Sbjct: 28  VASLSVRRYDAIFSFGDSLADTG-----NNPVVFDWYSIFDPVTRPPY 70


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,581,360
Number of Sequences: 37544
Number of extensions: 313330
Number of successful extensions: 728
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)