Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_P16
         (894 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            26   1.8  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   9.5  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
 Frame = +2

Query: 275  GIDTEQTYPYEGVDDKCRYNPKNTGAEDVGFVDIPE--GDEQKLMEAVATVGPVSVAID- 445
            G  T++++  +G D   R  PK     D    D+     D  K ++ +  +G + +A + 
Sbjct: 1265 GATTKKSFAADGTDVTVREKPKQESNRDADVKDLERTIWDRSKQLK-IIDLGALKLADEV 1323

Query: 446  ASHTSFQLYSSGVYNEEE 499
            AS+  F+ Y    Y  ++
Sbjct: 1324 ASYYGFEAYELNRYGVDK 1341


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +2

Query: 119 TTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGG 235
           TT  L   H   +    SLS Q+       YGNN   GG
Sbjct: 349 TTAGLNSSHIYTTPSSNSLSTQHSHSPVNGYGNNHPTGG 387


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,790
Number of Sequences: 2352
Number of extensions: 12204
Number of successful extensions: 72
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)