Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_P15
         (882 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   7.1  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   9.3  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   9.3  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   9.3  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 500 FKNFCK*QVSQCFFFXCYASRS 565
           F+ FC  +V+  FF  CYA  S
Sbjct: 69  FEGFCIAEVNGVFFCSCYAPPS 90


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 461 GEIIHLSNSDKNKKKTTIHTLKFLSTPLINKKPN 360
           GE++ +  S    K T ++ L F S P +   PN
Sbjct: 126 GELLAVMGSSGAGKTTLLNALAFRSPPGVKISPN 159


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 461 GEIIHLSNSDKNKKKTTIHTLKFLSTPLINKKPN 360
           GE++ +  S    K T ++ L F S P +   PN
Sbjct: 126 GELLAVMGSSGAGKTTLLNALAFRSPPGVKISPN 159


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 461 GEIIHLSNSDKNKKKTTIHTLKFLSTPLINKKPN 360
           GE++ +  S    K T ++ L F S P +   PN
Sbjct: 104 GELLAVMGSSGAGKTTLLNALAFRSPPGVKISPN 137


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,355
Number of Sequences: 2352
Number of extensions: 12639
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)