Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_P14
(889 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 239 1e-62
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 239 1e-62
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 239 1e-62
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 239 1e-62
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 239 1e-62
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 239 1e-62
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 236 9e-62
AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens ... 63 1e-09
AF016694-1|AAB71687.1| 246|Homo sapiens small intestinal mucin ... 30 9.8
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 239 bits (585), Expect = 1e-62
Identities = 108/143 (75%), Positives = 127/143 (88%)
Frame = +3
Query: 84 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 263
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 264 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 443
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 444 RAPCLRRRTYRAHGRINPYMSSP 512
+AP +RRRTYRAHGRINPYMSSP
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSP 143
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 239 bits (585), Expect = 1e-62
Identities = 108/143 (75%), Positives = 127/143 (88%)
Frame = +3
Query: 84 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 263
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 264 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 443
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 444 RAPCLRRRTYRAHGRINPYMSSP 512
+AP +RRRTYRAHGRINPYMSSP
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSP 143
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 239 bits (585), Expect = 1e-62
Identities = 108/143 (75%), Positives = 127/143 (88%)
Frame = +3
Query: 84 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 263
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 264 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 443
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 444 RAPCLRRRTYRAHGRINPYMSSP 512
+AP +RRRTYRAHGRINPYMSSP
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSP 143
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 239 bits (585), Expect = 1e-62
Identities = 108/143 (75%), Positives = 127/143 (88%)
Frame = +3
Query: 84 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 263
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 264 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 443
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 444 RAPCLRRRTYRAHGRINPYMSSP 512
+AP +RRRTYRAHGRINPYMSSP
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSP 143
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 239 bits (585), Expect = 1e-62
Identities = 108/143 (75%), Positives = 127/143 (88%)
Frame = +3
Query: 84 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 263
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 264 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 443
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 444 RAPCLRRRTYRAHGRINPYMSSP 512
+AP +RRRTYRAHGRINPYMSSP
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSP 143
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 239 bits (585), Expect = 1e-62
Identities = 108/143 (75%), Positives = 127/143 (88%)
Frame = +3
Query: 84 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 263
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 264 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 443
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 444 RAPCLRRRTYRAHGRINPYMSSP 512
+AP +RRRTYRAHGRINPYMSSP
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSP 143
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 236 bits (577), Expect = 9e-62
Identities = 107/143 (74%), Positives = 126/143 (88%)
Frame = +3
Query: 84 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 263
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 264 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 443
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 444 RAPCLRRRTYRAHGRINPYMSSP 512
+AP +RRRTYRA GRINPYMSSP
Sbjct: 121 KAPKMRRRTYRARGRINPYMSSP 143
>AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ27083 fis, clone SPL03425. ).
Length = 136
Score = 63.3 bits (147), Expect = 1e-09
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = +3
Query: 333 PKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSS 509
PK+ F L+ +SNA+ K LD+D L+I+ IQVN+AP + TYRAHG+INPY++S
Sbjct: 21 PKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYRAHGQINPYVTS 78
>AF016694-1|AAB71687.1| 246|Homo sapiens small intestinal mucin
MUC3 protein.
Length = 246
Score = 30.3 bits (65), Expect = 9.8
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +2
Query: 413 QASHRPHSGKSRALPTQTYIPCSRSHQPLHVVSLATSKYVSANAKMLSPGVAPTDDA 583
QAS P + ++PT TY S PL V ++T+ VS+ A LS P D +
Sbjct: 76 QASSSPTTADGTSMPTSTY---SEGGTPLTSVPVSTTPVVSSEASTLS--TTPVDSS 127
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,559,527
Number of Sequences: 237096
Number of extensions: 2179131
Number of successful extensions: 4800
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4799
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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