Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_P13
         (880 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016083-1|AAV36968.1|  856|Drosophila melanogaster LD44383p pro...    34   0.30 
BT001469-1|AAN71224.1| 1075|Drosophila melanogaster LD02622p pro...    34   0.30 
AE013599-11|EAA46158.1|  856|Drosophila melanogaster CG17665-PB,...    34   0.30 
AE013599-10|EAA46157.1| 1068|Drosophila melanogaster CG17665-PA,...    34   0.30 
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.5  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.5  

>BT016083-1|AAV36968.1|  856|Drosophila melanogaster LD44383p
           protein.
          Length = 856

 Score = 33.9 bits (74), Expect = 0.30
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = -1

Query: 226 FTAF*LW-FVQTHQCILSCLDPINPQLKGDPRPRFVAY*ILILEXXXXXXXXXXXXKYQQ 50
           +  F LW  VQ H   L C+  I P+L+    P  +++ +L+L+              ++
Sbjct: 609 YEQFCLWQIVQAHDVPLRCIQDILPELEAGSHPEALSHFLLLLKNEEPTNEIIRLMLSRE 668

Query: 49  FKS*GFPIVRSVI 11
            KS G P V S +
Sbjct: 669 SKSKGDPFVTSAL 681


>BT001469-1|AAN71224.1| 1075|Drosophila melanogaster LD02622p protein.
          Length = 1075

 Score = 33.9 bits (74), Expect = 0.30
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = -1

Query: 226  FTAF*LW-FVQTHQCILSCLDPINPQLKGDPRPRFVAY*ILILEXXXXXXXXXXXXKYQQ 50
            +  F LW  VQ H   L C+  I P+L+    P  +++ +L+L+              ++
Sbjct: 821  YEQFCLWQIVQAHDVPLRCIQDILPELEAGSHPEALSHFLLLLKNEEPTNEIIRLMLSRE 880

Query: 49   FKS*GFPIVRSVI 11
             KS G P V S +
Sbjct: 881  SKSKGDPFVTSAL 893


>AE013599-11|EAA46158.1|  856|Drosophila melanogaster CG17665-PB,
           isoform B protein.
          Length = 856

 Score = 33.9 bits (74), Expect = 0.30
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = -1

Query: 226 FTAF*LW-FVQTHQCILSCLDPINPQLKGDPRPRFVAY*ILILEXXXXXXXXXXXXKYQQ 50
           +  F LW  VQ H   L C+  I P+L+    P  +++ +L+L+              ++
Sbjct: 609 YEQFCLWQIVQAHDVPLRCIQDILPELEAGSHPEALSHFLLLLKNEEPTNEIIRLMLSRE 668

Query: 49  FKS*GFPIVRSVI 11
            KS G P V S +
Sbjct: 669 SKSKGDPFVTSAL 681


>AE013599-10|EAA46157.1| 1068|Drosophila melanogaster CG17665-PA,
            isoform A protein.
          Length = 1068

 Score = 33.9 bits (74), Expect = 0.30
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = -1

Query: 226  FTAF*LW-FVQTHQCILSCLDPINPQLKGDPRPRFVAY*ILILEXXXXXXXXXXXXKYQQ 50
            +  F LW  VQ H   L C+  I P+L+    P  +++ +L+L+              ++
Sbjct: 821  YEQFCLWQIVQAHDVPLRCIQDILPELEAGSHPEALSHFLLLLKNEEPTNEIIRLMLSRE 880

Query: 49   FKS*GFPIVRSVI 11
             KS G P V S +
Sbjct: 881  SKSKGDPFVTSAL 893


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 373 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 468
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 373 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 468
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,507,271
Number of Sequences: 53049
Number of extensions: 493721
Number of successful extensions: 964
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)