Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_P12
         (965 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.        58   4e-10
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    28   0.48 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   5.9  

>Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.
          Length = 91

 Score = 58.0 bits (134), Expect = 4e-10
 Identities = 27/32 (84%), Positives = 28/32 (87%)
 Frame = +3

Query: 276 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYAL 371
           + F  NVIRDAV YTEHAKRKTVTAMDVVYAL
Sbjct: 60  KVFLENVIRDAVAYTEHAKRKTVTAMDVVYAL 91



 Score = 57.2 bits (132), Expect = 7e-10
 Identities = 34/58 (58%), Positives = 37/58 (63%)
 Frame = +2

Query: 116 KAWGQGGATNGTGKVLKXXXSRKXRSLPFERLARRGGVKRISGLIYEETRSVLKVFLE 289
           K  G+GGA     KVL+       +     RLARRGGVKRISGLIYEE R VLKVFLE
Sbjct: 9   KGLGKGGARRHR-KVLRDNIQGTTKPA-IRRLARRGGVKRISGLIYEERRGVLKVFLE 64



 Score = 30.3 bits (65), Expect = 0.090
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +1

Query: 106 KAGQGLGTGXRDKRHRKSSQXXXFKEXTKPAIRKI---GATRRRQTYIRPDLRG 258
           K G+GLG G   +RHRK  +    +  TKPAIR++   G  +R    I  + RG
Sbjct: 6   KGGKGLGKGGA-RRHRKVLRDN-IQGTTKPAIRRLARRGGVKRISGLIYEERRG 57


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor
          24 protein.
          Length = 378

 Score = 27.9 bits (59), Expect = 0.48
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 22 LPSXGTAFXLCXPGLPFCKL 81
          LPS GTAF L  P + +C L
Sbjct: 24 LPSGGTAFVLASPSMTYCVL 43


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 16/62 (25%), Positives = 27/62 (43%)
 Frame = +1

Query: 106  KAGQGLGTGXRDKRHRKSSQXXXFKEXTKPAIRKIGATRRRQTYIRPDLRGNTQRSKGFS 285
            ++ +G     R K+ RK S        T P+ RK   T+R +  ++ +   NT +   F 
Sbjct: 1567 ESAKGTTRRERSKQGRKVSDQS--SSQTSPSKRKDSVTKRDRIILQDESEPNTSQYSTFI 1624

Query: 286  RE 291
             E
Sbjct: 1625 HE 1626


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,746
Number of Sequences: 2352
Number of extensions: 6257
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 105241344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)