Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_P09
         (899 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    55   1e-09
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    25   1.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   2.2  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   3.8  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   8.8  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    22   8.8  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   8.8  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    22   8.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   8.8  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 54.8 bits (126), Expect = 1e-09
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
 Frame = +2

Query: 80  GTVLKFTFGNCSLPEYYKQIYDKY-NQKQIGFHLGASPALVLRDLQDVQAVLASNFQSFY 256
           GT         S   + K IY+KY N+  +G +   SP L+L D + ++ +L  +F  F 
Sbjct: 44  GTTKDLILVKKSTAHFVKDIYEKYKNEPMVGLYATRSPFLLLNDPELIKDILIRDFSKFA 103

Query: 257 RRGFAVND-ADVLGGNMLFLDDLPRWKILRQKLSPAFS 367
            RG  V +  + L  ++L L+ + RW+ LR +LSP F+
Sbjct: 104 NRGLGVFERTEPLSPHLLNLE-VERWRPLRSRLSPIFT 140


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 17/57 (29%), Positives = 24/57 (42%)
 Frame = +3

Query: 201 SEISKTSRPCWQATSRAFIGAASL*TMPTCSEETCFS*TICLDGRSSDRSCPRPSVS 371
           S  + T   C    + A    +   ++  CS  T  S +     R+SDRS   PSVS
Sbjct: 147 SSSAPTGSSCGPGAAAAAALLSKRRSVSECSLGTASSTSSTASSRNSDRSAGSPSVS 203


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = -2

Query: 556 RXKSIRLS-PFSSSPNTATPMD 494
           R + IRL+ PF++SP T +P D
Sbjct: 503 RREGIRLAAPFNASPTTWSPAD 524


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
 Frame = -1

Query: 491 GSVLEYCIERFF-------YCTFVSSDIVGEVAGSLLNGFVH 387
           GS++ Y I R+        YC  V++ +V  + GS+L  F +
Sbjct: 342 GSIVFYIISRYVFRSALEDYCNIVATHLVCGILGSILVPFFY 383


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +2

Query: 554 SITRSGKCTQTLAQSKHRIFHWQHI 628
           ++    K    LA S   I+ W+HI
Sbjct: 22  AVNHQRKSANNLAHSMKVIYEWKHI 46


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 361 LQLAFGSRPCTKPLRRLPATSPTI 432
           L+ A G  PC    RRL + +P +
Sbjct: 52  LKCALGEAPCDPVGRRLKSLAPLV 75


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +3

Query: 318 ICLDGRSSDRSCPRPSVSLRLKAMYEAIEK 407
           +C+    +++SCP P V+ +     E  E+
Sbjct: 607 VCVLKTDTNQSCPSPPVTTKRDGTQETEER 636


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 361 LQLAFGSRPCTKPLRRLPATSPTI 432
           L+ A G  PC    RRL + +P +
Sbjct: 52  LKCALGEAPCDPVGRRLKSLAPLV 75


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/39 (20%), Positives = 21/39 (53%)
 Frame = +2

Query: 527 EGREPYRLTSITRSGKCTQTLAQSKHRIFHWQHIPETLQ 643
           + +EP   T + + G+  ++ ++   R FH++ I   ++
Sbjct: 416 DAQEPAWKTHVWKKGRDKKSTSKKPRRKFHFKQIARAVK 454


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,583
Number of Sequences: 438
Number of extensions: 4057
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)