Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_P07
         (946 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1088|AAF50683.1|  239|Drosophila melanogaster CG12330-P...    30   5.3  
AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p pro...    29   7.0  
AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA...    29   7.0  

>AE014296-1088|AAF50683.1|  239|Drosophila melanogaster CG12330-PA
           protein.
          Length = 239

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +2

Query: 728 PPPPXXKXKKXPPXKXGGXPPP 793
           PPPP       PP K  G PPP
Sbjct: 45  PPPPAPANSYGPPKKGNGKPPP 66


>AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p
           protein.
          Length = 993

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 14/44 (31%), Positives = 15/44 (34%)
 Frame = -1

Query: 703 PXPXXXXGPXXGPXXKXFFXGVPPXFWGKQXPPXXGGEXXPPPP 572
           P P    GP   P    +    PP       PP   G   PPPP
Sbjct: 438 PPPSGNYGPPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPP 481



 Score = 29.1 bits (62), Expect = 9.3
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 725 GPPPPXXKXKKXPPXKXGGXPPP 793
           GPPPP    +  PP    G PPP
Sbjct: 149 GPPPPKPAPQYGPPPTQYGPPPP 171


>AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA
           protein.
          Length = 993

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 14/44 (31%), Positives = 15/44 (34%)
 Frame = -1

Query: 703 PXPXXXXGPXXGPXXKXFFXGVPPXFWGKQXPPXXGGEXXPPPP 572
           P P    GP   P    +    PP       PP   G   PPPP
Sbjct: 438 PPPSGNYGPPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPP 481



 Score = 29.1 bits (62), Expect = 9.3
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 725 GPPPPXXKXKKXPPXKXGGXPPP 793
           GPPPP    +  PP    G PPP
Sbjct: 149 GPPPPKPAPQYGPPPTQYGPPPP 171


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,571,265
Number of Sequences: 53049
Number of extensions: 465360
Number of successful extensions: 2483
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2219
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4689737487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)