Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_P04
(895 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35637-2|CAA84688.1| 381|Caenorhabditis elegans Hypothetical pr... 97 1e-20
U51997-5|AAG24065.1| 668|Caenorhabditis elegans Hypothetical pr... 70 2e-12
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 32 0.64
AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical ... 30 1.9
AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical ... 30 1.9
AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical ... 30 1.9
AF099000-2|AAK71875.1| 337|Caenorhabditis elegans Serpentine re... 29 4.5
>Z35637-2|CAA84688.1| 381|Caenorhabditis elegans Hypothetical
protein C03C10.3 protein.
Length = 381
Score = 97.5 bits (232), Expect = 1e-20
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Frame = +2
Query: 131 TMAPTVDKENLHSGI--NGENRVQTKSPMKNSVLATKNDNLT-EEMDLDKNFEEFDPQKE 301
T V+KEN + + + N+++ + ++ + + + EE + + E D E
Sbjct: 4 TEIQNVEKENAGASVPKHSSNKLKLEKELEKLEIVDQTKAASAEETNNESEVNELDAD-E 62
Query: 302 PLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHV 481
P+L++ RFVIFP+++ DIW YKKA ASFWTVEEVDL KD++DWE + E++FI +
Sbjct: 63 PMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFISRI 122
Query: 482 LGF 490
L F
Sbjct: 123 LAF 125
Score = 92.7 bits (220), Expect = 3e-19
Identities = 57/116 (49%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = +3
Query: 504 DGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYS-LAYRYLHQRSEGERFSV*C 680
DGIVNENL ERFS EVQV+EAR FYGFQIA+EN+HSEMYS L Y+ R E ER ++
Sbjct: 130 DGIVNENLCERFSNEVQVSEARFFYGFQIAIENIHSEMYSKLIETYI--RDETERNTLFN 187
Query: 681 G*DS-SLCKEESRLGSTVDCKQDCNIW*KDCCLCSCKRIFFSGSFASIFWLKXGAL 845
D K+++ + + + + + IFFSGSFASIFWLK L
Sbjct: 188 AVDEFEFIKKKADWALRWISDKKASFAERLIAFAAVEGIFFSGSFASIFWLKKRGL 243
Score = 77.8 bits (183), Expect = 1e-14
Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +1
Query: 628 LIDTYIRDPKERDFLFNAVETLPCVKKKADWALQWIASRTATFGERIVAFAAVKESFSQA 807
LI+TYIRD ER+ LFNAV+ +KKKADWAL+WI+ + A+F ER++AFAAV+ F
Sbjct: 171 LIETYIRDETERNTLFNAVDEFEFIKKKADWALRWISDKKASFAERLIAFAAVEGIFFSG 230
Query: 808 VLLPSSG-SKXGPYAGTXFSNXLF-QG*GLH 894
K G G SN L + GLH
Sbjct: 231 SFASIFWLKKRGLMPGLTHSNELISRDEGLH 261
>U51997-5|AAG24065.1| 668|Caenorhabditis elegans Hypothetical
protein F19G12.2 protein.
Length = 668
Score = 70.1 bits (164), Expect = 2e-12
Identities = 39/90 (43%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +1
Query: 628 LIDTYIRDPKERDFLFNAVETLPCVKKKADWALQWIASRTATFGERIVAFAAVKE-SFSQ 804
L++ YIRD ER+ LFNA+ T +K KADW L+WI+ A F ER+ AFAAV+ FS
Sbjct: 458 LLEAYIRDDAERNILFNAITTFKFIKAKADWCLRWISDHNAPFSERLAAFAAVEGIFFSS 517
Query: 805 AVLLPSSGSKXGPYAGTXFSNXLFQG*GLH 894
+ K G G SN L LH
Sbjct: 518 SFAAIFWLKKRGLLPGLTHSNELISMFLLH 547
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 31.9 bits (69), Expect = 0.64
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = +2
Query: 200 KSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKK 379
K+ K+ V TK + +EMDL++ F + Q + ++N ++ P Y +I KK
Sbjct: 2693 KAEQKDFVYRTKTEEEKDEMDLEEFFANHE-QDHQVQKKNRKKCSKNPSNYANILMKIKK 2751
Query: 380 AEASFWTVEEVDLSKDLSDWETLKDS 457
+ + D+S L E + S
Sbjct: 2752 PTFLIQVLPDCDVSMLLESVERKRSS 2777
>AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical
protein C53H9.2c protein.
Length = 247
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +2
Query: 188 RVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQ 367
RV KS + ++ +N L DLD +E DP K+ LL N + ++ P Q W+
Sbjct: 7 RVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVN-KADLLKPEQQAS-WR 64
Query: 368 MYKKAE---ASFWT-VEEV 412
Y + E FW+ ++EV
Sbjct: 65 EYFEKENIKVIFWSAIDEV 83
>AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical
protein C53H9.2b protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +2
Query: 188 RVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQ 367
RV KS + ++ +N L DLD +E DP K+ LL N + ++ P Q W+
Sbjct: 7 RVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVN-KADLLKPEQQAS-WR 64
Query: 368 MYKKAE---ASFWT-VEEV 412
Y + E FW+ ++EV
Sbjct: 65 EYFEKENIKVIFWSAIDEV 83
>AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical
protein C53H9.2a protein.
Length = 554
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +2
Query: 188 RVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQ 367
RV KS + ++ +N L DLD +E DP K+ LL N + ++ P Q W+
Sbjct: 176 RVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVN-KADLLKPEQQAS-WR 233
Query: 368 MYKKAE---ASFWT-VEEV 412
Y + E FW+ ++EV
Sbjct: 234 EYFEKENIKVIFWSAIDEV 252
>AF099000-2|AAK71875.1| 337|Caenorhabditis elegans Serpentine
receptor, class h protein128 protein.
Length = 337
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 619 IPWLIDTYIRDPKERDFLFNAVETLPCVKKK 711
+ +L+ YI P +RD +ET+PC+ K
Sbjct: 150 VAFLVPIYILHPGQRDIQKYTIETIPCLPPK 180
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,930,878
Number of Sequences: 27780
Number of extensions: 432335
Number of successful extensions: 1296
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1294
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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