Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_P01
(897 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas... 385 e-108
SPCC31H12.05c |sds21||serine/threonine protein phosphatase Sds21... 363 e-101
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 301 6e-83
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa... 209 5e-55
SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc... 208 6e-55
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 198 9e-52
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas... 196 3e-51
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc... 194 1e-50
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ... 191 1e-49
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 142 5e-35
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 30 0.39
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 30 0.51
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 29 0.90
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 29 0.90
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 29 1.2
SPAC19A8.08 |upf2||nonsense-mediated decay protein Upf2|Schizosa... 27 2.7
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 27 2.7
SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces pom... 26 6.3
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 6.3
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 26 8.4
SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|ch... 26 8.4
SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|... 26 8.4
>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
PP1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 385 bits (948), Expect = e-108
Identities = 170/204 (83%), Positives = 190/204 (93%)
Frame = +3
Query: 243 ELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDI 422
++++D++I +LL+VRG +PG VQL+E EI+ LC K+REIF+SQPILLELEAPLKICGDI
Sbjct: 5 DVDLDSIIDRLLEVRGSRPGRQVQLSEDEIRFLCNKAREIFISQPILLELEAPLKICGDI 64
Query: 423 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 602
HGQYYDLLRLFEYGGFPPE+NYLFLGDYVDRGKQSLE ICLLLAYKIKYPENFF+LRGNH
Sbjct: 65 HGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLEVICLLLAYKIKYPENFFILRGNH 124
Query: 603 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 782
ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AAI+DEKIF HGGLSPDL +M+Q
Sbjct: 125 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFTMHGGLSPDLNSMDQ 184
Query: 783 IRRIMRPTDVPDQGLLCDLLWVRP 854
I+RIMRPTDVPD GLLCDLLW P
Sbjct: 185 IQRIMRPTDVPDTGLLCDLLWSDP 208
Score = 32.3 bits (70), Expect = 0.096
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 847 SDPDKXXPXWGENDRGV 897
SDPDK WG+NDRGV
Sbjct: 206 SDPDKDLTGWGDNDRGV 222
>SPCC31H12.05c |sds21||serine/threonine protein phosphatase
Sds21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 322
Score = 363 bits (894), Expect = e-101
Identities = 160/212 (75%), Positives = 184/212 (86%)
Frame = +3
Query: 243 ELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDI 422
+ +ID +I+KL+K R KP VQL++ EI+ LC SR IFLSQP+LLELEAPLKICGDI
Sbjct: 2 DYDIDAIIEKLVKARNGKPSKQVQLSDAEIRYLCTTSRSIFLSQPMLLELEAPLKICGDI 61
Query: 423 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 602
HGQY DLLRLFEYGG+PP++NYLFLGDYVDRGKQSLE ICLL AYKIKYPENFFLLRGNH
Sbjct: 62 HGQYSDLLRLFEYGGYPPDANYLFLGDYVDRGKQSLEVICLLFAYKIKYPENFFLLRGNH 121
Query: 603 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 782
E ASINRIYGFYDECKRRY+IKLWKTFTDCFNC+PVAA++DEKIFC HGGLSPDL +++Q
Sbjct: 122 EFASINRIYGFYDECKRRYSIKLWKTFTDCFNCMPVAAVIDEKIFCMHGGLSPDLNSLDQ 181
Query: 783 IRRIMRPTDVPDQGLLCDLLWVRPRQGXAXLG 878
I+RI+RPTD+PD GLLCDL+W P + G
Sbjct: 182 IQRIIRPTDIPDTGLLCDLVWSDPEKDLTGWG 213
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 847 SDPDKXXPXWGENDRGV 897
SDP+K WGENDRGV
Sbjct: 203 SDPEKDLTGWGENDRGV 219
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 301 bits (740), Expect = 6e-83
Identities = 139/204 (68%), Positives = 159/204 (77%), Gaps = 1/204 (0%)
Frame = +3
Query: 246 LNIDNVIKKLLKVR-GEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDI 422
LN+D +I++L+ V K +V L EI +C+ REIFLSQP LLEL P+KI GD+
Sbjct: 190 LNVDEMIQRLIHVGYSRKSSKSVCLKNAEITSICMAVREIFLSQPTLLELTPPVKIVGDV 249
Query: 423 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 602
HGQY DL+RLFE GFPP SNYLFLGDYVDRGKQSLETI LL YKI+YPENFFLLRGNH
Sbjct: 250 HGQYSDLIRLFEMCGFPPSSNYLFLGDYVDRGKQSLETILLLFLYKIRYPENFFLLRGNH 309
Query: 603 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 782
ECA+I R+YGFYDECKRR NIK+WKTF + FNCLP+A++V KIFC HGGLSP L M+
Sbjct: 310 ECANITRVYGFYDECKRRCNIKIWKTFINTFNCLPIASVVAGKIFCVHGGLSPSLSHMDD 369
Query: 783 IRRIMRPTDVPDQGLLCDLLWVRP 854
IR I RPTDVPD GLL DLLW P
Sbjct: 370 IREIPRPTDVPDYGLLNDLLWSDP 393
>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 209 bits (510), Expect = 5e-55
Identities = 85/181 (46%), Positives = 130/181 (71%), Gaps = 1/181 (0%)
Frame = +3
Query: 315 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 494
L+E ++ +C ++E+ + + + P+ +CGDIHGQ++DL+ LF GG P++NYLF
Sbjct: 23 LSEEDVIQMCDLAKEVLSVESNVQSVRCPVTVCGDIHGQFHDLMELFNIGGPSPDTNYLF 82
Query: 495 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 671
+GDYVDRG S+ET+ LL+A+KI+YP+ +LRGNHE I ++YGFYDEC R+Y N +
Sbjct: 83 MGDYVDRGYHSVETVSLLIAFKIRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANV 142
Query: 672 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWVR 851
W+ FTD F+ LP+ A+++++IFC HGGLSP + ++ +R + R +VP +G +CDLLW
Sbjct: 143 WQYFTDLFDYLPLTALIEDRIFCLHGGLSPSIDTLDHVRILDRVQEVPHEGPICDLLWSD 202
Query: 852 P 854
P
Sbjct: 203 P 203
>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 208 bits (509), Expect = 6e-55
Identities = 85/181 (46%), Positives = 130/181 (71%), Gaps = 1/181 (0%)
Frame = +3
Query: 315 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 494
L+E +++ LC K+RE+ + + + P+ +CGDIHGQ++DL+ LF+ GG P+ NYLF
Sbjct: 36 LSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHDLMELFKIGGDVPDMNYLF 95
Query: 495 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 671
+GDYVDRG S+ET+ LL+A K++YP +LRGNHE I ++YGFYDEC R+Y + +
Sbjct: 96 MGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQITQVYGFYDECLRKYGSANV 155
Query: 672 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWVR 851
WK FT+ F+ P+ A+++++IFC HGGLSP + +++ +R + R +VP +G +CDLLW
Sbjct: 156 WKHFTNLFDYFPLTALIEDRIFCLHGGLSPSIDSLDHVRTLDRVQEVPHEGPMCDLLWSD 215
Query: 852 P 854
P
Sbjct: 216 P 216
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 198 bits (483), Expect = 9e-52
Identities = 90/181 (49%), Positives = 123/181 (67%)
Frame = +3
Query: 312 QLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 491
+L+E + + K+ EI S+ L+E++AP+ +CGDIHGQYYDL++LFE GG P + YL
Sbjct: 84 RLSEEQTLYIIKKATEILKSEDNLIEVDAPVTVCGDIHGQYYDLMKLFEVGGNPANTQYL 143
Query: 492 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKL 671
FLGDYVDRG S+E + L A KI YP+ +LLRGNHECA + + F EC +YNIK+
Sbjct: 144 FLGDYVDRGYFSIECLLYLWALKIWYPKTLWLLRGNHECAHLTDYFTFKLECTHKYNIKV 203
Query: 672 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWVR 851
++ FN LP+AAI++++ C HGGLSP+L + IR I R + P GL+CDLLW
Sbjct: 204 YEACLQSFNALPLAAIMNKQFLCVHGGLSPELHTLNDIRMINRFCEPPTHGLMCDLLWSD 263
Query: 852 P 854
P
Sbjct: 264 P 264
>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 196 bits (479), Expect = 3e-51
Identities = 84/181 (46%), Positives = 120/181 (66%), Gaps = 1/181 (0%)
Frame = +3
Query: 315 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 494
L E ++K LC + I + + + + P+ +CGDIHGQ+YDLL LF GG P +NY+F
Sbjct: 17 LPEHQLKRLCEMVKVILMEESNIQPVRTPVTVCGDIHGQFYDLLELFRVGGELPSTNYIF 76
Query: 495 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 671
+GD+VDRG SLET L + K +YP+ LLRGNHE I ++YGFYDEC+ +Y N +
Sbjct: 77 MGDFVDRGYFSLETFTLFMLLKARYPDKITLLRGNHESRQITQVYGFYDECQTKYGNANV 136
Query: 672 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWVR 851
WK F+ L +AA++D KI C HGGLSP+++ ++QIR + R ++P +G CDL+W
Sbjct: 137 WKYCCQVFDFLTLAAVIDNKILCVHGGLSPEVRTLDQIRILARAQEIPHEGSFCDLMWSD 196
Query: 852 P 854
P
Sbjct: 197 P 197
>SPBC26H8.05c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 194 bits (474), Expect = 1e-50
Identities = 86/181 (47%), Positives = 121/181 (66%), Gaps = 1/181 (0%)
Frame = +3
Query: 315 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 494
+ E + LC + R+I + + + + +P+ ICGDIHGQ +DLL LF GG P + YLF
Sbjct: 19 IPESNVVELCQRVRDILIEESNIQWISSPVTICGDIHGQLHDLLELFRIGGSCPGTKYLF 78
Query: 495 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 671
LGD+VDRG S+ET LLL K KYP+ L+RGNHE I ++YGFYDEC R+Y + +
Sbjct: 79 LGDFVDRGFYSVETFLLLLTLKCKYPKEMTLIRGNHESRQITQVYGFYDECVRKYGSANV 138
Query: 672 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWVR 851
W+ + F+ L + A+VD K+FC HGGLSP + +++QIR + R +VP +G +CDLLW
Sbjct: 139 WRYCCEIFDYLSLGALVDGKVFCVHGGLSPSISSIDQIRLLDRKQEVPHEGAMCDLLWSD 198
Query: 852 P 854
P
Sbjct: 199 P 199
>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 307
Score = 191 bits (466), Expect = 1e-49
Identities = 90/204 (44%), Positives = 132/204 (64%), Gaps = 1/204 (0%)
Frame = +3
Query: 246 LNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIH 425
+++DN+I++L + + + E I LC ++E+ + + ++ L P+ + GDIH
Sbjct: 2 IDLDNIIERLYEKQ--------LIAESVIAYLCSLAKEVLMQESNVVRLSTPITVVGDIH 53
Query: 426 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 605
GQ+ DLL +F GG P +NYLFLGDYVDRG S+ETI LL+ K++YP+ LLRGNHE
Sbjct: 54 GQFDDLLEIFRIGGPCPYTNYLFLGDYVDRGYYSIETITLLICLKLRYPKRITLLRGNHE 113
Query: 606 CASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 782
I + YGFY EC R+Y N +WK FTD F+ L ++A +D+ IFC HGGLSP +Q ++Q
Sbjct: 114 SRGITQTYGFYSECLRKYGNANVWKYFTDIFDFLTLSATIDDTIFCVHGGLSPSIQHIDQ 173
Query: 783 IRRIMRPTDVPDQGLLCDLLWVRP 854
I + R + P +G + DL+W P
Sbjct: 174 ILVLDRFREFPHEGPMADLVWSDP 197
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 142 bits (345), Expect = 5e-35
Identities = 71/176 (40%), Positives = 107/176 (60%), Gaps = 8/176 (4%)
Frame = +3
Query: 354 REIFLSQPILLEL----EAPLKICGDIHGQYYDLLRLFEYGGFP-PESNYLFLGDYVDRG 518
+E+ P L+++ + L ICGD HGQY+DLL +F+ G P P + YLF GD+VDRG
Sbjct: 192 KELLEKTPSLIDIPVKGDETLVICGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRG 251
Query: 519 KQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFN 698
S E L AYK+ YP+ F+ RGNHE +N++YGF EC+ +YN + + F++ F+
Sbjct: 252 SWSTEVAFTLYAYKLLYPDAVFINRGNHETDDMNKVYGFEGECRSKYNERTFNIFSETFS 311
Query: 699 CLPVAAIVDEKIFCCHGGL-SPDLQAMEQIRRIMR-PTDVPDQ-GLLCDLLWVRPR 857
LP+ +++ + HGGL S D ++Q+R I R P Q GL+ ++LW P+
Sbjct: 312 LLPLGSLISDSYLVVHGGLFSDDNVTLDQLRNIDRFSKKQPGQSGLMMEMLWTDPQ 367
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 30.3 bits (65), Expect = 0.39
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = -3
Query: 481 DSGGKPPYSNNLKRS*YCPCMSPQIFKGASSSSSIGCDKNISLDFKHSPL-ISISVN*TF 305
DS PP + + P P I ++SSS + NIS + + S + S+S N
Sbjct: 157 DSVNSPPSYGIMASATNQPLSHPTIVPSSNSSSLLNSTNNISHNPQVSLMSASLSKNLVL 216
Query: 304 IPGFSPRTFSNFFITLSMFNSSVSLSAIGY 215
P SP++ S + +S N VS +A Y
Sbjct: 217 DPA-SPKSVSPDLVYVSSDNPPVSTAASAY 245
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 29.9 bits (64), Expect = 0.51
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 201 RTHTIYPMADRDTDELNIDNVIKKLL-KVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQP 377
+THTI + R D I ++ LL +V G K MNV ++ ++ K R++ + P
Sbjct: 140 KTHTI---SGRPDDPGIIFLTMRALLDRVEGLKRTMNVDISVSYLEIYNEKIRDLLVQDP 196
Query: 378 ILLELEAPLKICGD 419
+ +E L IC D
Sbjct: 197 LSMEKPKSLNICED 210
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 29.1 bits (62), Expect = 0.90
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 687 DCFNCLPVAAIVDEKIFCC-HGGLSPD 764
D ++C+ + A+ ++FCC HGGL+PD
Sbjct: 646 DPYSCVRILAL---ELFCCSHGGLTPD 669
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 29.1 bits (62), Expect = 0.90
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +3
Query: 324 IEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRL------FEYGGFPPESN 485
+++K + ++ +FL+ P + +LE L+ G + L RL EY P +
Sbjct: 122 LQVKASPIDAQYVFLAPPSIEQLEVRLRGRGT-ENESAILQRLERARAEIEYSEKPGNFD 180
Query: 486 YLFLGDYVDRGKQSLETICL 545
L + D V++ + LE ICL
Sbjct: 181 ALIVNDDVEKAYKQLEAICL 200
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 863 SLSGSDPEQVAEQTLVGNVRRPHDPPDLFHSLQVRRQTAVTT 738
S S S P + ++ VR+ PP LFH L + A+TT
Sbjct: 63 SPSTSSPSSASSRSQSKYVRKEALPPQLFHHLDSAKDKALTT 104
>SPAC19A8.08 |upf2||nonsense-mediated decay protein
Upf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1049
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -1
Query: 279 LVIFLLRYRCLTHLCLCLPSDILYVYEIWLNRIGKRREMFKIFADYE 139
++ +LL Y+C + +P D+LY +E + IG R K++ YE
Sbjct: 820 MLTYLLAYQCYFLIQPEMPLDMLYEFE---DVIGYVRPSMKVYMHYE 863
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 611 GTLVVSA*KKEILGIFNLVGEEQAYCFQRLLATVHIVSEE 492
G+L+ K ++NL G YCF RL T++ EE
Sbjct: 987 GSLLDDGTKLSDRSVYNLFGNMSLYCFFRLFHTLYSRLEE 1026
>SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 370
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +3
Query: 564 KYPENFFLLRGNHECASINRI--YGFYD-ECKRRYNIKLWKTFTDCFNCLP 707
+Y + + LL+ + + I + + F D K Y +K W+ F CLP
Sbjct: 144 EYADKYRLLKNHKNVSGIVKATHFAFADIPEKSEYTLKQWRIFEKAAGCLP 194
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 421 MSPQIFKGASSSSSIGCDKNISLD 350
+S Q+FK SS S + CD+ ++D
Sbjct: 567 VSVQVFKDGSSDSEVRCDEYAAVD 590
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 25.8 bits (54), Expect = 8.4
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +1
Query: 472 LRSPTISSSETMWTVASSRWKQYACSSPTRLNI 570
+R+ I S+ +W+ A W Y+ P R+ +
Sbjct: 2097 VRACFIQGSQQVWSAALWYWGSYSTDKPNRMGV 2129
>SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|chr
3|||Manual
Length = 923
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 465 GFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKY 569
GF + + L LG Y RGKQS + L ++ Y
Sbjct: 482 GFGEDLDCLILGGYFGRGKQSGKINSFLCGLRMDY 516
>SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 270
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 841 SKSQSKPWSGTSVGLMIRRICSIACRSGDRPP*QQKIFSSTIAAT 707
SK P S T++ L + C+I S ++ P QKI S + T
Sbjct: 106 SKIAFNPISNTTLVLFLTECCNIYLFSENKKPVDQKIRSDLLEQT 150
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,529,988
Number of Sequences: 5004
Number of extensions: 76273
Number of successful extensions: 225
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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