Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_O13
(994 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical pr... 38 0.008
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 37 0.019
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.059
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.059
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.059
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 35 0.078
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 35 0.078
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 33 0.32
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.32
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 32 0.55
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 32 0.55
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.55
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 31 0.96
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 31 0.96
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 31 0.96
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 31 0.96
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.96
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 31 0.96
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 31 1.3
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 31 1.7
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 31 1.7
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 30 2.2
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 30 2.2
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 30 2.2
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 30 2.2
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 30 2.2
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 30 2.2
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 30 2.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.9
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.9
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 3.9
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 3.9
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 3.9
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 29 3.9
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 3.9
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 29 5.1
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 29 5.1
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 29 5.1
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 29 5.1
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 29 6.8
Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical p... 29 6.8
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 6.8
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 6.8
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 6.8
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 6.8
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 28 9.0
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 9.0
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 28 9.0
>Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical
protein F53C11.5c protein.
Length = 830
Score = 38.3 bits (85), Expect = 0.008
Identities = 21/67 (31%), Positives = 26/67 (38%)
Frame = +2
Query: 728 DPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPPXX 907
DP TG + P PP P P PPP P P +P P+ ++ PPP
Sbjct: 8 DPVTGQHYIVPQYYPPPMYPYPSAPPPHPNAP-MYYPYGHHAPSHAPMPSQKIL-PPPTT 65
Query: 908 XXPPXXG 928
P G
Sbjct: 66 SAPSNSG 72
>Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical
protein F53C11.5b protein.
Length = 891
Score = 38.3 bits (85), Expect = 0.008
Identities = 21/67 (31%), Positives = 26/67 (38%)
Frame = +2
Query: 728 DPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPPXX 907
DP TG + P PP P P PPP P P +P P+ ++ PPP
Sbjct: 69 DPVTGQHYIVPQYYPPPMYPYPSAPPPHPNAP-MYYPYGHHAPSHAPMPSQKIL-PPPTT 126
Query: 908 XXPPXXG 928
P G
Sbjct: 127 SAPSNSG 133
>Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical
protein F53C11.5a protein.
Length = 855
Score = 38.3 bits (85), Expect = 0.008
Identities = 21/67 (31%), Positives = 26/67 (38%)
Frame = +2
Query: 728 DPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPPXX 907
DP TG + P PP P P PPP P P +P P+ ++ PPP
Sbjct: 33 DPVTGQHYIVPQYYPPPMYPYPSAPPPHPNAP-MYYPYGHHAPSHAPMPSQKIL-PPPTT 90
Query: 908 XXPPXXG 928
P G
Sbjct: 91 SAPSNSG 97
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 37.1 bits (82), Expect = 0.019
Identities = 40/136 (29%), Positives = 42/136 (30%), Gaps = 1/136 (0%)
Frame = +2
Query: 542 PPGXXGXPXXTPCEPRXGQG-PXTRAKGRLXGPVXPXXXXXXXXXXREKLXPXFXGVGAX 718
PPG G P P G P T L GP P P GV
Sbjct: 190 PPGPPGKQG--PKGPNGEPGAPGTPGGNALPGPPGPPGPQGPPGADGLPGNPGAPGVPGQ 247
Query: 719 RGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPP 898
P T P PPG P P PP P PG+ PG P + G
Sbjct: 248 VIEVPGT------PGPAGPPGPPGPIGPPGQPGAPGSSQPGPQGPPGDPGIDGAPGNPGS 301
Query: 899 PXXXXPPXXGFXGXGG 946
P PP G G GG
Sbjct: 302 PGEPGPP--GQPGAGG 315
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.059
Identities = 31/90 (34%), Positives = 31/90 (34%), Gaps = 1/90 (1%)
Frame = +2
Query: 686 LXPXFXGVGAXRGGDPXTGXLGVFPXXXSPPGXPXPXVP-PPXPXXPGTLFPGXSFPXLX 862
L P G G P TG P PPG P PP P PG L P P
Sbjct: 706 LPPITGGPPPPPGLPPITGG----PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Query: 863 TPLGGXXLVXPPPXXXXPPXXGFXGXGGXP 952
P G PPP PP GF G P
Sbjct: 762 PPPPGGCPPPPPP----PPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.059
Identities = 31/90 (34%), Positives = 31/90 (34%), Gaps = 1/90 (1%)
Frame = +2
Query: 686 LXPXFXGVGAXRGGDPXTGXLGVFPXXXSPPGXPXPXVP-PPXPXXPGTLFPGXSFPXLX 862
L P G G P TG P PPG P PP P PG L P P
Sbjct: 706 LPPITGGPPPPPGLPPITGG----PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Query: 863 TPLGGXXLVXPPPXXXXPPXXGFXGXGGXP 952
P G PPP PP GF G P
Sbjct: 762 PPPPGGCPPPPPP----PPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.059
Identities = 31/90 (34%), Positives = 31/90 (34%), Gaps = 1/90 (1%)
Frame = +2
Query: 686 LXPXFXGVGAXRGGDPXTGXLGVFPXXXSPPGXPXPXVP-PPXPXXPGTLFPGXSFPXLX 862
L P G G P TG P PPG P PP P PG L P P
Sbjct: 289 LPPITGGPPPPPGLPPITGG----PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
Query: 863 TPLGGXXLVXPPPXXXXPPXXGFXGXGGXP 952
P G PPP PP GF G P
Sbjct: 345 PPPPGGCPPPPPP----PPPGGFKGGPPPP 370
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 35.1 bits (77), Expect = 0.078
Identities = 19/56 (33%), Positives = 22/56 (39%)
Frame = +2
Query: 731 PXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPP 898
P G G +P P P P V P P PG +P P P GG + PP
Sbjct: 151 PPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGA-YPPPRMPIGHGPPGGPPMPGPP 205
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 35.1 bits (77), Expect = 0.078
Identities = 19/56 (33%), Positives = 22/56 (39%)
Frame = +2
Query: 731 PXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPP 898
P G G +P P P P V P P PG +P P P GG + PP
Sbjct: 151 PPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGA-YPPPRMPIGHGPPGGPPMPGPP 205
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 33.1 bits (72), Expect = 0.32
Identities = 30/93 (32%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Frame = +2
Query: 722 GGDPXTGXLGVFPXXXSPP--GXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXP 895
G P G G F +PP G P P P P G PG P P GG
Sbjct: 309 GAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP--PGPFNPSGAPPSGGPPGPFD 366
Query: 896 P---PXXXXPPXXGFXGXGGXPNXGPXFXXXPS 985
P P PP F G P+ GP PS
Sbjct: 367 PSGAPPSGGPPGP-FDPSGAPPSGGPPGPFDPS 398
Score = 32.7 bits (71), Expect = 0.42
Identities = 30/93 (32%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Frame = +2
Query: 722 GGDPXTGXLGVFPXXXSPP--GXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXP 895
G P G G F +PP G P P P P G PG P P GG
Sbjct: 219 GAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP--PGPFNPSGAPPSGGPPGPFD 276
Query: 896 P---PXXXXPPXXGFXGXGGXPNXGPXFXXXPS 985
P P PP F G P+ GP PS
Sbjct: 277 PSGAPPSGGPPGP-FDPSGAPPSGGPPGPFDPS 308
Score = 32.7 bits (71), Expect = 0.42
Identities = 29/93 (31%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Frame = +2
Query: 722 GGDPXTGXLGVFPXXXSPP--GXPXPXVP---PPXPXXPGTLFPGXSFPXLXTPLGGXXL 886
G P G G F +PP G P P P PP PG P + P P G
Sbjct: 264 GAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPP--GPFN 321
Query: 887 VXPPPXXXXPPXXGFXGXGGXPNXGPXFXXXPS 985
P PP F G P+ GP PS
Sbjct: 322 PSGAPPSGGPPGP-FDPSGAPPSGGPPGPFNPS 353
Score = 32.7 bits (71), Expect = 0.42
Identities = 29/93 (31%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Frame = +2
Query: 722 GGDPXTGXLGVFPXXXSPP--GXPXPXVP---PPXPXXPGTLFPGXSFPXLXTPLGGXXL 886
G P G G F +PP G P P P PP PG P + P P G
Sbjct: 354 GAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGA-PPSGGPPGPFNP 412
Query: 887 VXPPPXXXXPPXXGFXGXGGXPNXGPXFXXXPS 985
PP P F G P+ GP PS
Sbjct: 413 SGAPPSGG--PPGPFNPSGAPPSGGPPGPFNPS 443
Score = 32.3 bits (70), Expect = 0.55
Identities = 26/88 (29%), Positives = 28/88 (31%)
Frame = +2
Query: 722 GGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPP 901
GG P P PPG P PP PG P + P P G PP
Sbjct: 404 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA-PPSGGPPGPFNPSGAPP 462
Query: 902 XXXXPPXXGFXGXGGXPNXGPXFXXXPS 985
P F G P+ GP PS
Sbjct: 463 SGG--PPGPFNPSGAPPSGGPPGPFDPS 488
Score = 31.9 bits (69), Expect = 0.73
Identities = 44/171 (25%), Positives = 48/171 (28%), Gaps = 4/171 (2%)
Frame = +2
Query: 485 GRXPAAXGFXXLXGGXRGVPPGXXGXPXXTPCEPRXGQGPXTRAKGRLXGPVXPXXXXXX 664
G+ P G L G G PPG P P P R RL P
Sbjct: 68 GQPPGPQGPSDLPG-PSGAPPGPP-HPSGPPHRPHPHPSRRPRPT-RLPRPSRSPHSDAP 124
Query: 665 XXXXREKLXPXFXGVGAXRGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGX 844
G G P G G F +PP P + P P PG
Sbjct: 125 EPSAATDGFELVFGKHHSTGAPPSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGP 184
Query: 845 SFPXLXTPLGGXXLVXPPPXXXXPPXXG----FXGXGGXPNXGPXFXXXPS 985
P P GG P PP G F G P+ GP PS
Sbjct: 185 FGPSGAPPSGGPP--GPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPS 233
Score = 31.5 bits (68), Expect = 0.96
Identities = 28/90 (31%), Positives = 31/90 (34%), Gaps = 5/90 (5%)
Frame = +2
Query: 731 PXTGXLGVFPXXXSPP--GXPXPXVP---PPXPXXPGTLFPGXSFPXLXTPLGGXXLVXP 895
P G G F +PP G P P P PP PG P + P P G
Sbjct: 207 PSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA-PPSGGPPGPFNPSGA 265
Query: 896 PPXXXXPPXXGFXGXGGXPNXGPXFXXXPS 985
PP P F G P+ GP PS
Sbjct: 266 PPSGG--PPGPFDPSGAPPSGGPPGPFDPS 293
Score = 29.5 bits (63), Expect = 3.9
Identities = 25/88 (28%), Positives = 27/88 (30%)
Frame = +2
Query: 722 GGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPP 901
GG P P P G P PP PG P + P P G PP
Sbjct: 194 GGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGA-PPSGGPPGPFDPSGAPP 252
Query: 902 XXXXPPXXGFXGXGGXPNXGPXFXXXPS 985
P F G P+ GP PS
Sbjct: 253 SGG--PPGPFNPSGAPPSGGPPGPFDPS 278
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 758 PXXXSPPGXPXPXVPPPXPXXPGTLFPGXS 847
P SPP P P PP P P L PG S
Sbjct: 55 PDPSSPPPAPRPSGQPPGPQGPSDL-PGPS 83
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.1 bits (72), Expect = 0.32
Identities = 25/74 (33%), Positives = 26/74 (35%), Gaps = 4/74 (5%)
Frame = +2
Query: 776 PGXPXPXVPPPX--PXXPGTLFPGXSFPXLX--TPLGGXXLVXPPPXXXXPPXXGFXGXG 943
PG P PPP P PG+ P P P GG PPP P G
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAA 462
Query: 944 GXPNXGPXFXXXPS 985
G P P F PS
Sbjct: 463 GAPGGNP-FARGPS 475
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +2
Query: 785 PXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPPXXXXPPXXGFXGXGGXPNXGP 964
P PPP PG P S GG PPP P G G G P GP
Sbjct: 375 PGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPP----PGGPGAPGSYGPPQGGP 430
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.55
Identities = 41/149 (27%), Positives = 42/149 (28%), Gaps = 3/149 (2%)
Frame = +2
Query: 527 GXRGVP--PGXXGXPXXTPCEPRXGQGPXTRAKGRLXGPVXPXXXXXXXXXXREKLXPXF 700
G G P PG G P PCEP K GP P E P
Sbjct: 118 GKPGAPGLPGNPGRPPQQPCEPI----TPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGL 173
Query: 701 XGVGAXRGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGX 880
G A G P PPG P P P PG P S P + G
Sbjct: 174 PGQDAAPGE----------PGPKGPPGPPGAPGAPGTPGEPGV--PAQSEPLIPGEPGPP 221
Query: 881 XLVXPPPXXXXPPXXGFXGXGGXPN-XGP 964
P P G G G P GP
Sbjct: 222 GEAGPQGPPGSPGQPGADGSPGQPGPKGP 250
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.55
Identities = 41/149 (27%), Positives = 42/149 (28%), Gaps = 3/149 (2%)
Frame = +2
Query: 527 GXRGVP--PGXXGXPXXTPCEPRXGQGPXTRAKGRLXGPVXPXXXXXXXXXXREKLXPXF 700
G G P PG G P PCEP K GP P E P
Sbjct: 118 GKPGAPGLPGNPGRPPQQPCEPI----TPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGL 173
Query: 701 XGVGAXRGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGX 880
G A G P PPG P P P PG P S P + G
Sbjct: 174 PGQDAAPGE----------PGPKGPPGPPGAPGAPGTPGEPGV--PAQSEPLIPGEPGPP 221
Query: 881 XLVXPPPXXXXPPXXGFXGXGGXPN-XGP 964
P P G G G P GP
Sbjct: 222 GEAGPQGPPGSPGQPGADGSPGQPGPKGP 250
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 32.3 bits (70), Expect = 0.55
Identities = 43/153 (28%), Positives = 47/153 (30%), Gaps = 9/153 (5%)
Frame = +2
Query: 533 RGVPPGXXGX--PXXTPCEPRXGQGPXTRAKGRLXGPVXPXXXXXXXXXXREKLXPXFXG 706
RG PP G P P G GP R + G P R P G
Sbjct: 1465 RGGPPPPRGMNSPMRGMPPPMRGGGPPMRGGPPMRGG-PPMFRGGPPGPGRGMPSPMMRG 1523
Query: 707 VGAX-----RGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPL 871
RGG P G + G P +PPP G + G P P
Sbjct: 1524 SSMRGGFPQRGGGPGMGPSQYYHDSPQNRGPPMGGLPPPHGGMNG--WRGGPPP----PR 1577
Query: 872 GGXXLVXPPP-XXXXPPXXGFXGXG-GXPNXGP 964
GG PPP PP G G PN GP
Sbjct: 1578 GGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGP 1610
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 31.5 bits (68), Expect = 0.96
Identities = 26/71 (36%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = +2
Query: 755 FPXXXSPPGXPX-PXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPPXXXXPPXXGF 931
FP S P P P PP PG PG SFP GG + P P G
Sbjct: 269 FPPGASAPVAPGMPGAFPPGQGGPG--MPG-SFPPGAPGPGGPGM----PGSFAPGAPGP 321
Query: 932 XGXGGXPNXGP 964
G GG P+ GP
Sbjct: 322 GGPGGYPSGGP 332
Score = 29.5 bits (63), Expect = 3.9
Identities = 30/105 (28%), Positives = 33/105 (31%), Gaps = 4/105 (3%)
Frame = +2
Query: 539 VPPGXXGXPXXTPCE---PRXGQGPXTRAKGRLXGPVXPXXXXXXXXXXREKLXPXFXGV 709
+PPG G P P P Q P + G P P + P G
Sbjct: 225 IPPGTGGFPPGQPTAGSFPPGPQVPGSYPSGPADIPQGPGMPRAFPPGASAPVAPGMPGA 284
Query: 710 GAXRGGDPXTGXLGVFPXXXSPPGXPXPXVP-PPXPXXPGTLFPG 841
G P G G F PPG P P P P PG PG
Sbjct: 285 FPPGQGGP--GMPGSF-----PPGAPGPGGPGMPGSFAPGAPGPG 322
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 31.5 bits (68), Expect = 0.96
Identities = 26/90 (28%), Positives = 29/90 (32%)
Frame = +2
Query: 692 PXFXGVGAXRGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPL 871
P G GA +P T P PPG P P P P PG + P P
Sbjct: 143 PGASGKGAAAPCEPSTPP-PCQPCPAGPPGPPGPDGTPGEPGGPGPA-GSPAGPSGPGPA 200
Query: 872 GGXXLVXPPPXXXXPPXXGFXGXGGXPNXG 961
G PP P G G G + G
Sbjct: 201 GPPGPAGPPGNDGQPGQPGGPGQDGASSAG 230
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.96
Identities = 27/86 (31%), Positives = 31/86 (36%)
Frame = +2
Query: 725 GDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPPX 904
G +G G +P PP P +PPP P PG + P P P G PPP
Sbjct: 250 GMAQSGYQGQYPPVPPPPPSVTP-MPPPMPPTPG-MTPRPPPP----PSSGMWPPPPPPP 303
Query: 905 XXXPPXXGFXGXGGXPNXGPXFXXXP 982
P G G G P P P
Sbjct: 304 PGRTP--GPPGMPGMPPPPPPSRFGP 327
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 31.5 bits (68), Expect = 0.96
Identities = 32/102 (31%), Positives = 34/102 (33%), Gaps = 15/102 (14%)
Frame = +2
Query: 692 PXFXGVGAXRG--GDPXTGXLGVFPXXXSPPGXPXPXVP--PPXPXXPGTL----FPGX- 844
P F G G G P T L P +P P P P P PGT +PG
Sbjct: 690 PGFPGAKGDGGLPGLPGTPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGEGGYPGRP 749
Query: 845 ------SFPXLXTPLGGXXLVXPPPXXXXPPXXGFXGXGGXP 952
FP L G L PP P G G GG P
Sbjct: 750 GEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVP 791
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 31.5 bits (68), Expect = 0.96
Identities = 32/102 (31%), Positives = 34/102 (33%), Gaps = 15/102 (14%)
Frame = +2
Query: 692 PXFXGVGAXRG--GDPXTGXLGVFPXXXSPPGXPXPXVP--PPXPXXPGTL----FPGX- 844
P F G G G P T L P +P P P P P PGT +PG
Sbjct: 689 PGFPGAKGDGGLPGLPGTPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGEGGYPGRP 748
Query: 845 ------SFPXLXTPLGGXXLVXPPPXXXXPPXXGFXGXGGXP 952
FP L G L PP P G G GG P
Sbjct: 749 GEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVP 790
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 31.5 bits (68), Expect = 0.96
Identities = 32/102 (31%), Positives = 34/102 (33%), Gaps = 15/102 (14%)
Frame = +2
Query: 692 PXFXGVGAXRG--GDPXTGXLGVFPXXXSPPGXPXPXVP--PPXPXXPGTL----FPGX- 844
P F G G G P T L P +P P P P P PGT +PG
Sbjct: 689 PGFPGAKGDGGLPGLPGTPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGEGGYPGRP 748
Query: 845 ------SFPXLXTPLGGXXLVXPPPXXXXPPXXGFXGXGGXP 952
FP L G L PP P G G GG P
Sbjct: 749 GEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVP 790
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 31.5 bits (68), Expect = 0.96
Identities = 32/102 (31%), Positives = 34/102 (33%), Gaps = 15/102 (14%)
Frame = +2
Query: 692 PXFXGVGAXRG--GDPXTGXLGVFPXXXSPPGXPXPXVP--PPXPXXPGTL----FPGX- 844
P F G G G P T L P +P P P P P PGT +PG
Sbjct: 690 PGFPGAKGDGGLPGLPGTPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGEGGYPGRP 749
Query: 845 ------SFPXLXTPLGGXXLVXPPPXXXXPPXXGFXGXGGXP 952
FP L G L PP P G G GG P
Sbjct: 750 GEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVP 791
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.96
Identities = 27/86 (31%), Positives = 31/86 (36%)
Frame = +2
Query: 725 GDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPPX 904
G +G G +P PP P +PPP P PG + P P P G PPP
Sbjct: 260 GMAQSGYQGQYPPVPPPPPSVTP-MPPPMPPTPG-MTPRPPPP----PSSGMWPPPPPPP 313
Query: 905 XXXPPXXGFXGXGGXPNXGPXFXXXP 982
P G G G P P P
Sbjct: 314 PGRTP--GPPGMPGMPPPPPPSRFGP 337
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 31.5 bits (68), Expect = 0.96
Identities = 32/102 (31%), Positives = 34/102 (33%), Gaps = 15/102 (14%)
Frame = +2
Query: 692 PXFXGVGAXRG--GDPXTGXLGVFPXXXSPPGXPXPXVP--PPXPXXPGTL----FPGX- 844
P F G G G P T L P +P P P P P PGT +PG
Sbjct: 726 PGFPGAKGDGGLPGLPGTPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGEGGYPGRP 785
Query: 845 ------SFPXLXTPLGGXXLVXPPPXXXXPPXXGFXGXGGXP 952
FP L G L PP P G G GG P
Sbjct: 786 GEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVP 827
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 31.1 bits (67), Expect = 1.3
Identities = 38/149 (25%), Positives = 42/149 (28%)
Frame = +2
Query: 542 PPGXXGXPXXTPCEPRXGQGPXTRAKGRLXGPVXPXXXXXXXXXXREKLXPXFXGVGAXR 721
PPG G P P P P + G GP P + P G R
Sbjct: 145 PPGPAGTPG-APGAPGNAGAPGQDSFGGGPGPAGPTGPTGDAGAPGQPGHPGSPG-NPGR 202
Query: 722 GGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPP 901
GG G G P G P P P P PG G P G P
Sbjct: 203 GGQRSRGLPG-------PSGRPGPQGPAGGPGQPGQ-SGGSGTPGQP---GAPGAPGHPG 251
Query: 902 XXXXPPXXGFXGXGGXPNXGPXFXXXPSR 988
P G G G P + P+R
Sbjct: 252 QAGTPGTPGAPGNSGAPGGDAAYCPCPAR 280
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 758 PXXXSPPGXPXPXVPPPXPXXPGT 829
P SPP P P PPP P P T
Sbjct: 349 PPIISPPAPPPPPPPPPPPPPPQT 372
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 704 GVGAXRG--GDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFP 853
GV +G G+P G P PPG P P PP P G PG + P
Sbjct: 204 GVPGEKGPTGEPGKVINGAPPGPPGPPGPPGPQGPPGPPGKDGQ--PGKAGP 253
Score = 28.7 bits (61), Expect = 6.8
Identities = 42/144 (29%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Frame = +2
Query: 542 PPGXXGXPXXTPCEPRXGQGPXTRAKGRLXGPVX-PXXXXXXXXXXREKLXPXFXGVGAX 718
PPG G P P P GP R L GP P P G+
Sbjct: 118 PPGRDGRPG-APGRP-GNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPGPKGLPGP 175
Query: 719 RGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFP-GXSFPXLXTPLGGXXLVXP 895
+G +G GV P PPG P P P PG P G + G
Sbjct: 176 QGDAGTSGQDGV-PGLPGPPG---PSGPQGAPGVPGEKGPTGEPGKVINGAPPGPPGPPG 231
Query: 896 PPXXXXPPXXGFXGXGGXP-NXGP 964
PP PP G G G P GP
Sbjct: 232 PPGPQGPP--GPPGKDGQPGKAGP 253
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 30.3 bits (65), Expect = 2.2
Identities = 28/88 (31%), Positives = 29/88 (32%), Gaps = 1/88 (1%)
Frame = +2
Query: 704 GVGAXRGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXX 883
G GA G P G G P PPG P P P PG P T + G
Sbjct: 188 GPGAP-GNTPSGGAAGP-PGPPGPPGGPGNDGQPGGPGNPGA-------PGAVTEVPGQQ 238
Query: 884 LVXPPPXXXXPP-XXGFXGXGGXPNXGP 964
PP PP G G G GP
Sbjct: 239 GPPGPPGPAGPPGPAGNAGQAGYAQPGP 266
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +2
Query: 758 PXXXSPPGXPXPXVPPPXPXXPGTLFP--GXSFPXLXTPLGGXXLVXPPPXXXXPPXXGF 931
P PPG P P P PG P G P P G + PP G
Sbjct: 204 PGPKGPPGQPGADGQPGMPGEPGKDAPQEGSPVPGDPGPPGDSGIPGPPGPPGMAGPDGI 263
Query: 932 XGXGG 946
G GG
Sbjct: 264 PGMGG 268
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +2
Query: 758 PXXXSPPGXPXPXVP-PPXPXXPGTLFPGXSFP 853
P PPG P P P PP P P +PG P
Sbjct: 132 PPQHFPPGPPRPHFPGPPGPHRPPEHYPGPPRP 164
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 30.3 bits (65), Expect = 2.2
Identities = 25/78 (32%), Positives = 25/78 (32%), Gaps = 6/78 (7%)
Frame = +1
Query: 541 PPGXXGXPXGNTL*TPXGP-----RAXHPGQRPVXGA-GFXXXXXXXXXXXXXKVXPSXX 702
PPG G P G P GP R PGQ G G P
Sbjct: 266 PPGNNGAPGGGYGVGPPGPPGPSGRPGAPGQPGPDGQPGAPGNDGTPGTDAAYCPCPGRG 325
Query: 703 GGGXXPGGGPXHGXPWXF 756
GGG G G HG P F
Sbjct: 326 GGGGGYGAGAHHGGPQGF 343
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/58 (27%), Positives = 22/58 (37%)
Frame = +2
Query: 791 PXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPPXXXXPPXXGFXGXGGXPNXGP 964
P + PP PG + PG P + + G + P P G G G P+ P
Sbjct: 579 PGMMPPGMMPPGMMPPGMMPPGMHPGMAGMPPMHPGMQGMPPMHPGMQGMPGMPHGPP 636
Score = 28.3 bits (60), Expect = 9.0
Identities = 19/72 (26%), Positives = 23/72 (31%)
Frame = +2
Query: 749 GVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPPXXXXPPXXG 928
G +P PG P P +PP P G +P P P G + P P
Sbjct: 400 GQYPGPMHYPGMP-PMMPPGAPFSAGASYPPMGGPFPPNPYGMHPGMTPGGYPMSAPGKM 458
Query: 929 FXGXGGXPNXGP 964
G P P
Sbjct: 459 PFGSPSFPQSAP 470
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 30.3 bits (65), Expect = 2.2
Identities = 40/147 (27%), Positives = 42/147 (28%), Gaps = 7/147 (4%)
Frame = +2
Query: 527 GXRGVP--PGXXGXPXXTPCEPRXGQGPXTRAKGRLXGPVXPXXXXXXXXXXREKLXPX- 697
G G P PG G P P EP GP R+ PV P P
Sbjct: 98 GPDGEPGTPGKDGEPGQGPGEPGP-PGPDAELHDRIL-PVPPQCPCTAAPGLGGPPGPPG 155
Query: 698 ---FXGVGAXRGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXT- 865
G G D G G PPG P P PG L PG P +
Sbjct: 156 QDGIPGNPGRNGEDGAPGPQGP-SGPPGPPGQPGQPGQRGPPGEPGALLPGGDAPPGPSG 214
Query: 866 PLGGXXLVXPPPXXXXPPXXGFXGXGG 946
P G P P G G G
Sbjct: 215 PPGRPGAPGQPGKAGSPGQDGSNGDAG 241
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/71 (28%), Positives = 24/71 (33%), Gaps = 3/71 (4%)
Frame = +2
Query: 728 DPXTGXLGVFPXXXSPPGXPXPXVPP---PXPXXPGTLFPGXSFPXLXTPLGGXXLVXPP 898
+P T G P P P P P P P +P S+P P V PP
Sbjct: 344 EPETPDSGYPSPAPQEPAHPSPSYPSPSYPSPSYPSPSYPSPSYPSPSYPAEPAYSV-PP 402
Query: 899 PXXXXPPXXGF 931
P P G+
Sbjct: 403 PAKPEQPSGGY 413
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.9
Identities = 25/96 (26%), Positives = 26/96 (27%)
Frame = +1
Query: 460 PPPLPPXXRPXXGGXXFXXPXRRX*GXPPGXXGXPXGNTL*TPXGPRAXHPGQRPVXGAG 639
PPP PP P G P PP G P +P P A G P AG
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG--GSPPPPRAG 295
Query: 640 FXXXXXXXXXXXXXKVXPSXXGGGXXPGGGPXHGXP 747
P GG P G P
Sbjct: 296 SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.9
Identities = 25/96 (26%), Positives = 26/96 (27%)
Frame = +1
Query: 460 PPPLPPXXRPXXGGXXFXXPXRRX*GXPPGXXGXPXGNTL*TPXGPRAXHPGQRPVXGAG 639
PPP PP P G P PP G P +P P A G P AG
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG--GSPPPPRAG 316
Query: 640 FXXXXXXXXXXXXXKVXPSXXGGGXXPGGGPXHGXP 747
P GG P G P
Sbjct: 317 SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.9
Identities = 25/96 (26%), Positives = 26/96 (27%)
Frame = +1
Query: 460 PPPLPPXXRPXXGGXXFXXPXRRX*GXPPGXXGXPXGNTL*TPXGPRAXHPGQRPVXGAG 639
PPP PP P G P PP G P +P P A G P AG
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG--GSPPPPRAG 301
Query: 640 FXXXXXXXXXXXXXKVXPSXXGGGXXPGGGPXHGXP 747
P GG P G P
Sbjct: 302 SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.5 bits (63), Expect = 3.9
Identities = 25/70 (35%), Positives = 25/70 (35%)
Frame = +2
Query: 776 PGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPPXXXXPPXXGFXGXGGXPN 955
P P P VP P P PG G P P GG PPP PP G G P
Sbjct: 760 PSGPSP-VPRPAPAPPG----GRQAPM--PPRGGPG-APPPPGMRPPPGAPGGGGGMYPP 811
Query: 956 XGPXFXXXPS 985
P PS
Sbjct: 812 LIPTRVPTPS 821
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.9
Identities = 39/144 (27%), Positives = 39/144 (27%), Gaps = 2/144 (1%)
Frame = +2
Query: 527 GXRGVP--PGXXGXPXXTPCEPRXGQGPXTRAKGRLXGPVXPXXXXXXXXXXREKLXPXF 700
G G P PG G P PCEP K GP P E P
Sbjct: 120 GRPGAPGTPGTPGKPPVAPCEPT----TPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGR 175
Query: 701 XGVGAXRGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGX 880
G A G P PPG P PGT P S P G
Sbjct: 176 PGTDAAPGS----------PGPRGPPGPAGEAGAPGPAGEPGT--PAISEPLTPGAPGEP 223
Query: 881 XLVXPPPXXXXPPXXGFXGXGGXP 952
PP P G G G P
Sbjct: 224 GDSGPPGPPGPPGAPGNDGPPGPP 247
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.5 bits (63), Expect = 3.9
Identities = 39/144 (27%), Positives = 39/144 (27%), Gaps = 2/144 (1%)
Frame = +2
Query: 527 GXRGVP--PGXXGXPXXTPCEPRXGQGPXTRAKGRLXGPVXPXXXXXXXXXXREKLXPXF 700
G G P PG G P PCEP K GP P E P
Sbjct: 115 GRPGAPGTPGTPGKPPVAPCEPT----TPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGR 170
Query: 701 XGVGAXRGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGX 880
G A G P PPG P PGT P S P G
Sbjct: 171 PGTDAAPGS----------PGPRGPPGPAGEAGAPGPAGEPGT--PAISEPLTPGAPGEP 218
Query: 881 XLVXPPPXXXXPPXXGFXGXGGXP 952
PP P G G G P
Sbjct: 219 GDSGPPGPPGPPGAPGNDGPPGPP 242
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.9
Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Frame = +2
Query: 725 GDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPG-XSFPXLXTPLGGXXLVXPPP 901
GD T P +PPG P PP P PG PG P P L+ P
Sbjct: 168 GDAGTNGAPGAPGGDAPPGEAGPKGPPGPPGSPGA--PGEPGRPGDDAP--SEPLIPGEP 223
Query: 902 XXXXPP-XXGFXGXGGXP 952
PP G G G P
Sbjct: 224 GPQGPPGPPGQAGPDGQP 241
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.5 bits (63), Expect = 3.9
Identities = 39/144 (27%), Positives = 39/144 (27%), Gaps = 2/144 (1%)
Frame = +2
Query: 527 GXRGVP--PGXXGXPXXTPCEPRXGQGPXTRAKGRLXGPVXPXXXXXXXXXXREKLXPXF 700
G G P PG G P PCEP K GP P E P
Sbjct: 115 GRPGAPGTPGTPGKPPVAPCEPT----TPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGR 170
Query: 701 XGVGAXRGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGX 880
G A G P PPG P PGT P S P G
Sbjct: 171 PGTDAAPGS----------PGPRGPPGPAGEAGAPGPAGEPGT--PAISEPLTPGAPGEP 218
Query: 881 XLVXPPPXXXXPPXXGFXGXGGXP 952
PP P G G G P
Sbjct: 219 GDSGPPGPPGPPGAPGNDGPPGPP 242
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 29.5 bits (63), Expect = 3.9
Identities = 27/104 (25%), Positives = 30/104 (28%)
Frame = +2
Query: 542 PPGXXGXPXXTPCEPRXGQGPXTRAKGRLXGPVXPXXXXXXXXXXREKLXPXFXGVGAXR 721
PPG G P + G A G+ G P R VGA
Sbjct: 212 PPGPSGAPG------QKGPSGAPGAPGQSGGSALPGPPGPAGSPGRSGQPGSNGNVGAPG 265
Query: 722 GGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFP 853
G P PPG P P P P G+ PG P
Sbjct: 266 APGQVVDVPGA-PGPAGPPGPPGPSGAPGHPGQAGSSLPGAPGP 308
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.5 bits (63), Expect = 3.9
Identities = 25/70 (35%), Positives = 25/70 (35%)
Frame = +2
Query: 776 PGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPPXXXXPPXXGFXGXGGXPN 955
P P P VP P P PG G P P GG PPP PP G G P
Sbjct: 760 PSGPSP-VPRPAPAPPG----GRQAPM--PPRGGPG-APPPPGMRPPPGAPGGGGGMYPP 811
Query: 956 XGPXFXXXPS 985
P PS
Sbjct: 812 LIPTRVPTPS 821
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 29.1 bits (62), Expect = 5.1
Identities = 37/148 (25%), Positives = 41/148 (27%)
Frame = +2
Query: 545 PGXXGXPXXTPCEPRXGQGPXTRAKGRLXGPVXPXXXXXXXXXXREKLXPXFXGVGAXRG 724
PG G P P P A G GP P + P G +G
Sbjct: 136 PGPAGAPG-APGPQGPSGAPGQDAVGGGPGPAGPQGPAGDAGAPGQAGAPGHPGAPG-QG 193
Query: 725 GDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPPX 904
G G G P G P P P P PG G P P G P
Sbjct: 194 GQRSRGTPG-------PSGAPGPQGPAGGPGQPGQ-SGGAGAPG---PAGAPGAPGGPGN 242
Query: 905 XXXPPXXGFXGXGGXPNXGPXFXXXPSR 988
P G G G P + P+R
Sbjct: 243 AGTPGTPGAPGNAGAPGGDAAYCPCPAR 270
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 29.1 bits (62), Expect = 5.1
Identities = 38/144 (26%), Positives = 40/144 (27%), Gaps = 2/144 (1%)
Frame = +2
Query: 527 GXRGVP--PGXXGXPXXTPCEPRXGQGPXTRAKGRLXGPVXPXXXXXXXXXXREKLXPXF 700
G G P PG G P PCEP P G P P
Sbjct: 118 GKPGAPGLPGNPGRPPQQPCEP-ITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGQ 176
Query: 701 XGVGAXRGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGX 880
G G +G G P PG P P P PG PG + P P G
Sbjct: 177 DGQPGAPGNKGPSGPNG-NPGAPGAPGQPGQDA-PSEPITPGA--PGPAGP--AGPQGQP 230
Query: 881 XLVXPPPXXXXPPXXGFXGXGGXP 952
P P G G G P
Sbjct: 231 GAPGQPGHDGQPGAPGPKGPNGNP 254
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 29.1 bits (62), Expect = 5.1
Identities = 38/144 (26%), Positives = 40/144 (27%), Gaps = 2/144 (1%)
Frame = +2
Query: 527 GXRGVP--PGXXGXPXXTPCEPRXGQGPXTRAKGRLXGPVXPXXXXXXXXXXREKLXPXF 700
G G P PG G P PCEP P G P P
Sbjct: 118 GKPGAPGLPGNPGRPPQQPCEP-ITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGN 176
Query: 701 XGVGAXRGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGX 880
G G +G G P PG P P P PG PG + P P G
Sbjct: 177 DGQPGAPGNKGPSGPNG-NPGAPGAPGQPGQDA-PSEPITPGA--PGPAGP--AGPQGPP 230
Query: 881 XLVXPPPXXXXPPXXGFXGXGGXP 952
P P G G G P
Sbjct: 231 GAPGQPGHDGQPGAPGPKGPNGNP 254
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 29.1 bits (62), Expect = 5.1
Identities = 38/144 (26%), Positives = 40/144 (27%), Gaps = 2/144 (1%)
Frame = +2
Query: 527 GXRGVP--PGXXGXPXXTPCEPRXGQGPXTRAKGRLXGPVXPXXXXXXXXXXREKLXPXF 700
G G P PG G P PCEP P G P P
Sbjct: 118 GKPGAPGLPGNPGRPPQQPCEP-ITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGN 176
Query: 701 XGVGAXRGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGX 880
G G +G G P PG P P P PG PG + P P G
Sbjct: 177 DGQPGAPGNKGPSGPNG-NPGAPGAPGQPGQDA-PSEPITPGA--PGPAGP--AGPQGPP 230
Query: 881 XLVXPPPXXXXPPXXGFXGXGGXP 952
P P G G G P
Sbjct: 231 GAPGQPGHDGQPGAPGPKGPNGNP 254
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.1 bits (62), Expect = 5.1
Identities = 38/144 (26%), Positives = 40/144 (27%), Gaps = 2/144 (1%)
Frame = +2
Query: 527 GXRGVP--PGXXGXPXXTPCEPRXGQGPXTRAKGRLXGPVXPXXXXXXXXXXREKLXPXF 700
G G P PG G P PCEP P G P P
Sbjct: 118 GKPGAPGLPGNPGRPPQQPCEP-ITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGN 176
Query: 701 XGVGAXRGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGX 880
G G +G G P PG P P P PG PG + P P G
Sbjct: 177 DGQPGAPGNKGPSGPNG-NPGAPGAPGQPGQDA-PSEPITPGA--PGPAGP--AGPQGPP 230
Query: 881 XLVXPPPXXXXPPXXGFXGXGGXP 952
P P G G G P
Sbjct: 231 GAPGQPGHDGQPGAPGPKGPNGNP 254
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.1 bits (62), Expect = 5.1
Identities = 38/144 (26%), Positives = 40/144 (27%), Gaps = 2/144 (1%)
Frame = +2
Query: 527 GXRGVP--PGXXGXPXXTPCEPRXGQGPXTRAKGRLXGPVXPXXXXXXXXXXREKLXPXF 700
G G P PG G P PCEP P G P P
Sbjct: 118 GKPGAPGLPGNPGRPPQQPCEP-ITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGN 176
Query: 701 XGVGAXRGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGX 880
G G +G G P PG P P P PG PG + P P G
Sbjct: 177 DGQPGAPGNKGPSGPNG-NPGAPGAPGQPGQDA-PSEPITPGA--PGPAGP--AGPQGPP 230
Query: 881 XLVXPPPXXXXPPXXGFXGXGGXP 952
P P G G G P
Sbjct: 231 GAPGQPGHDGQPGAPGPKGPNGNP 254
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 29.1 bits (62), Expect = 5.1
Identities = 35/143 (24%), Positives = 39/143 (27%)
Frame = +2
Query: 542 PPGXXGXPXXTPCEPRXGQGPXTRAKGRLXGPVXPXXXXXXXXXXREKLXPXFXGVGAXR 721
PPG G P GQ P GP P + P GV A
Sbjct: 162 PPGAPGSPGPQGNAGAPGQ-PGHGGGSGAPGPAGPKGQRGAPGHPGQAGSPGRPGVDAQS 220
Query: 722 GGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPP 901
+P P P G P P P P PG +PG P P G
Sbjct: 221 QSNPGA------PGQAGPQGPPGPSGAPGAPGGPG--YPGP--PGQKGPSGAPGQPGSDG 270
Query: 902 XXXXPPXXGFXGXGGXPNXGPXF 970
P G G G P +
Sbjct: 271 NPGAPGQPGQSGGSGNRGICPKY 293
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +2
Query: 773 PPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPPXXXXPPXXG 928
P P P V P TLFP FP P PPP P G
Sbjct: 31 PTTPPAPTVSPYGNETLPTLFPPLVFPNFTVPTLNPMAPVPPPTFGPIPGLG 82
>Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical
protein Y69H2.10a protein.
Length = 572
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +2
Query: 773 PPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPPXXXXPPXXG 928
P P P V P TLFP FP P PPP P G
Sbjct: 31 PTTPPAPTVSPYGNETLPTLFPPLVFPNFTVPTLNPMAPVPPPTFGPIPGLG 82
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 6.8
Identities = 22/57 (38%), Positives = 22/57 (38%)
Frame = +2
Query: 776 PGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPPXXXXPPXXGFXGXGG 946
P P P VP P P PG G P P GG PPP PP G GG
Sbjct: 760 PSGPSP-VPRPAPAPPG----GRQAPM--PPRGGPGA--PPPPGMRPPPGAPGGGGG 807
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = +2
Query: 773 PPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPPXXXXPPXXGFXGXGGXP 952
PPG P P P P PG P T L + PP P G G G P
Sbjct: 114 PPGTPGPAGRPGKPGRPGAC-GNHGNPGKPTGLPCDPVTVPPCKPCPPGPAGEPGHDGAP 172
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 6.8
Identities = 22/57 (38%), Positives = 22/57 (38%)
Frame = +2
Query: 776 PGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPPXXXXPPXXGFXGXGG 946
P P P VP P P PG G P P GG PPP PP G GG
Sbjct: 760 PSGPSP-VPRPAPAPPG----GRQAPM--PPRGGPGA--PPPPGMRPPPGAPGGGGG 807
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 6.8
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 4/68 (5%)
Frame = +2
Query: 773 PPGXPXPXVPPPXPXXPGTL----FPGXSFPXLXTPLGGXXLVXPPPXXXXPPXXGFXGX 940
PPG P P PP PG PG GG PP P G G
Sbjct: 212 PPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPP---GPPGPPGQDGS 268
Query: 941 GGXPNXGP 964
GG GP
Sbjct: 269 GGAAQPGP 276
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 28.3 bits (60), Expect = 9.0
Identities = 38/143 (26%), Positives = 42/143 (29%), Gaps = 3/143 (2%)
Frame = +2
Query: 542 PPGXXGXPXXTPCEPRXGQGPXTRAKGR--LXGPVXPXXXXXXXXXXREKLXPXFXGVGA 715
PPG G P R G+ GR G P + P G A
Sbjct: 151 PPGPPGFPGSDGQPGRDGEAGAPGQPGRDGAGGYGGPQQNDCQTCAPARQGAPGPPGP-A 209
Query: 716 XRGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTL-FPGXSFPXLXTPLGGXXLVX 892
+ G P PPG P P PP PG PG + P G
Sbjct: 210 GQPGQPGEPGHSDTSSTAGPPGPPGPGGPPGQDGHPGDAGAPGAPGQVVAGP-GSVG--- 265
Query: 893 PPPXXXXPPXXGFXGXGGXPNXG 961
PP PP G G G P G
Sbjct: 266 -PPGPQGPP--GLAGPDGQPGHG 285
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/63 (25%), Positives = 20/63 (31%)
Frame = +2
Query: 731 PXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPLGGXXLVXPPPXXX 910
P + + P S G PPP P P + P P+ PPP
Sbjct: 4 PISILFSIIPIASSTFGGCCSMGPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCP 63
Query: 911 XPP 919
PP
Sbjct: 64 PPP 66
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 28.3 bits (60), Expect = 9.0
Identities = 21/70 (30%), Positives = 24/70 (34%)
Frame = +2
Query: 692 PXFXGVGAXRGGDPXTGXLGVFPXXXSPPGXPXPXVPPPXPXXPGTLFPGXSFPXLXTPL 871
P G+G + P G P PP P PPP P G P F PL
Sbjct: 24 PPCFGIGCNQ---PPIVIAGPPPCFDCPPPAPIFVAPPP-PPCFGPACPPPCFGPACVPL 79
Query: 872 GGXXLVXPPP 901
+ PPP
Sbjct: 80 APIIVNGPPP 89
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,035,668
Number of Sequences: 27780
Number of extensions: 269549
Number of successful extensions: 1747
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1397
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2594635024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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