Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_O12
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600...    30   2.9  
10_01_0163 - 1850018-1850033,1850184-1850271,1850824-1854544           30   2.9  
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914...    29   5.0  
01_01_1083 - 8519987-8520254,8520442-8520554                           28   8.7  

>10_08_0558 + 18756797-18756887,18757189-18757262,18759881-18760069,
            18760190-18760309,18760457-18760521,18760684-18760828,
            18761304-18763337,18763904-18764025,18764127-18764309,
            18764635-18764690,18765086-18765141
          Length = 1044

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
 Frame = +1

Query: 205  SVMAEELQKVHLFYDDINKIK--VLEENVLKDTEDLRDTCKEYENKVQNFEXXXXXXXXX 378
            SV++EE+ ++    ++++  +  + EEN  KD E L   C++ +  +Q+ +         
Sbjct: 763  SVLSEEIDQLKAKIENLSNERDNLFEENEQKDKE-LAANCQK-DMFLQDRDAEIALLNKE 820

Query: 379  XXXXGDNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDSEYDTLQIL 558
                 D V+      +  +N LKS   +KE    KLQ+EI         +  EYD L+IL
Sbjct: 821  LASIKDQVQTY----LEEINTLKSSKNEKEEMIEKLQSEI-------RSLKFEYDNLKIL 869

Query: 559  EAT 567
             +T
Sbjct: 870  MST 872


>10_01_0163 - 1850018-1850033,1850184-1850271,1850824-1854544
          Length = 1274

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 241 FYDDINKIKVLEENVLKDTEDLRDTCKEYE 330
           F+ D+NKI   EENV +     R TCK ++
Sbjct: 471 FFQDVNKISQREENVYRSQLRDRTTCKIHD 500


>10_06_0105 - 10790092-10790323,10791092-10791234,10791322-10791429,
            10791796-10791903,10793133-10797686,10798347-10798461,
            10799597-10799724,10799843-10800043,10800158-10800227,
            10801233-10801314,10801433-10801556,10801761-10801778
          Length = 1960

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 226  QKVHLFYDDINKIKVLEENVLKDTEDLRDTCKEYE 330
            ++V  + DDI ++KVL  N+ +  +DLR T  E E
Sbjct: 1421 ERVLKYQDDILQLKVLLTNLEEQVDDLRSTKDEVE 1455


>01_01_1083 - 8519987-8520254,8520442-8520554
          Length = 126

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +1

Query: 211 MAEELQKVHLFYDDINKIKVL-EENV--LKDTEDLRDTCKEYENKVQN 345
           + E+  +VH   DDI K  VL E+N   LKD E  R   +E  ++ Q+
Sbjct: 52  LEEKRNQVHRLQDDIEKCHVLIEDNAAKLKDNEQNRVELQEQTDRCQS 99


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,979,866
Number of Sequences: 37544
Number of extensions: 173780
Number of successful extensions: 428
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)