Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_O12
         (894 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY224601-1|AAP50265.1|  158|Homo sapiens intraflagellar transpor...    91   4e-18
BC038094-1|AAH38094.1|  132|Homo sapiens IFT20 protein protein.        91   5e-18
BC002640-1|AAH02640.1|  148|Homo sapiens intraflagellar transpor...    44   7e-04
BC110585-1|AAI10586.1|  975|Homo sapiens ring finger protein 20 ...    33   1.4  
BC110584-1|AAI10585.1|  975|Homo sapiens ring finger protein 20 ...    33   1.4  
AL591377-3|CAH69963.1|  977|Homo sapiens ring finger protein 20 ...    33   1.4  
AL353621-9|CAI14618.1|  977|Homo sapiens ring finger protein 20 ...    33   1.4  
AK022300-1|BAB14005.1|  746|Homo sapiens protein ( Homo sapiens ...    33   1.4  
AK002051-1|BAA92057.1|  333|Homo sapiens protein ( Homo sapiens ...    33   1.4  
AK022532-1|BAB14081.1|  975|Homo sapiens protein ( Homo sapiens ...    33   1.8  
D42054-1|BAA07654.2|  475|Homo sapiens KIAA0092 protein.               31   5.6  
BC039711-1|AAH39711.1|  270|Homo sapiens CEP57 protein protein.        31   5.6  
BC029385-1|AAH29385.1|  450|Homo sapiens CEP57 protein protein.        31   5.6  
BC001233-1|AAH01233.1|  500|Homo sapiens centrosomal protein 57k...    31   5.6  
AY239292-1|AAP72184.1|  500|Homo sapiens proliferation-inducing ...    31   5.6  
AY225092-1|AAO73938.1|  500|Homo sapiens translokin protein.           31   5.6  
BC033519-1|AAH33519.1|  287|Homo sapiens syntaxin 11 protein.          30   9.9  
AL135917-1|CAI22980.1|  287|Homo sapiens syntaxin 11 protein.          30   9.9  
AF071504-1|AAC24004.1|  287|Homo sapiens syntaxin 11 protein.          30   9.9  

>AY224601-1|AAP50265.1|  158|Homo sapiens intraflagellar transport
           protein 20-like protein protein.
          Length = 158

 Score = 91.5 bits (217), Expect = 4e-18
 Identities = 49/128 (38%), Positives = 78/128 (60%), Gaps = 1/128 (0%)
 Frame = +1

Query: 205 SVMAEE-LQKVHLFYDDINKIKVLEENVLKDTEDLRDTCKEYENKVQNFEXXXXXXXXXX 381
           + MA++ L +  L +D++NK++VL+  V + T +L++ CK++ +K+  F+          
Sbjct: 25  TAMAKDILGEAGLHFDELNKLRVLDPEVTQQTIELKEECKDFVDKIGQFQKIVGGLIELV 84

Query: 382 XXXGDNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDSEYDTLQILE 561
                  EN+KM AIGA NLLKSIAK +E++Q +LQA I +K   LE+   EY+ L  +E
Sbjct: 85  DQLAKEAENEKMKAIGARNLLKSIAKQREAQQQQLQALIAEKKMQLERYRVEYEALCKVE 144

Query: 562 ATQMETIE 585
           A Q E I+
Sbjct: 145 AEQNEFID 152


>BC038094-1|AAH38094.1|  132|Homo sapiens IFT20 protein protein.
          Length = 132

 Score = 91.1 bits (216), Expect = 5e-18
 Identities = 49/126 (38%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
 Frame = +1

Query: 211 MAEE-LQKVHLFYDDINKIKVLEENVLKDTEDLRDTCKEYENKVQNFEXXXXXXXXXXXX 387
           MA++ L +  L +D++NK++VL+  V + T +L++ CK++ +K+  F+            
Sbjct: 1   MAKDILGEAGLHFDELNKLRVLDPEVTQQTIELKEECKDFVDKIGQFQKIVGGLIELVDQ 60

Query: 388 XGDNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDSEYDTLQILEAT 567
                EN+KM AIGA NLLKSIAK +E++Q +LQA I +K   LE+   EY+ L  +EA 
Sbjct: 61  LAKEAENEKMKAIGARNLLKSIAKQREAQQQQLQALIAEKKMQLERYRVEYEALCKVEAE 120

Query: 568 QMETIE 585
           Q E I+
Sbjct: 121 QNEFID 126


>BC002640-1|AAH02640.1|  148|Homo sapiens intraflagellar transport
           20 homolog (Chlamydomonas) protein.
          Length = 148

 Score = 44.0 bits (99), Expect = 7e-04
 Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
 Frame = +1

Query: 211 MAEE-LQKVHLFYDDINKIKVLEENVLKDTEDLRDTCKEYENKVQNFEXXXXXXXXXXXX 387
           MA++ L +  L +D++NK++VL+  V + T +L++ CK++ +K+  F+            
Sbjct: 1   MAKDILGEAGLHFDELNKLRVLDPEVTQQTIELKEECKDFVDKIGQFQKIVGGLIELVDQ 60

Query: 388 XGDNVENKKMAAI 426
                EN+KM ++
Sbjct: 61  LAKEAENEKMKSL 73


>BC110585-1|AAI10586.1|  975|Homo sapiens ring finger protein 20
           protein.
          Length = 975

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 22/67 (32%), Positives = 35/67 (52%)
 Frame = +1

Query: 403 ENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDSEYDTLQILEATQMETI 582
           ENKKMA   A+  ++++ +  E  Q KL     ++ +LL ++D    T Q  E  Q + I
Sbjct: 691 ENKKMADEDALRKIRAVEEQIEYLQKKLAMAKQEEEALLSEMDV---TGQAFEDMQEQNI 747

Query: 583 EYLTQLR 603
             + QLR
Sbjct: 748 RLMQQLR 754


>BC110584-1|AAI10585.1|  975|Homo sapiens ring finger protein 20
           protein.
          Length = 975

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 22/67 (32%), Positives = 35/67 (52%)
 Frame = +1

Query: 403 ENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDSEYDTLQILEATQMETI 582
           ENKKMA   A+  ++++ +  E  Q KL     ++ +LL ++D    T Q  E  Q + I
Sbjct: 691 ENKKMADEDALRKIRAVEEQIEYLQKKLAMAKQEEEALLSEMDV---TGQAFEDMQEQNI 747

Query: 583 EYLTQLR 603
             + QLR
Sbjct: 748 RLMQQLR 754


>AL591377-3|CAH69963.1|  977|Homo sapiens ring finger protein 20
           protein.
          Length = 977

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 22/67 (32%), Positives = 35/67 (52%)
 Frame = +1

Query: 403 ENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDSEYDTLQILEATQMETI 582
           ENKKMA   A+  ++++ +  E  Q KL     ++ +LL ++D    T Q  E  Q + I
Sbjct: 693 ENKKMADEDALRKIRAVEEQIEYLQKKLAMAKQEEEALLSEMDV---TGQAFEDMQEQNI 749

Query: 583 EYLTQLR 603
             + QLR
Sbjct: 750 RLMQQLR 756


>AL353621-9|CAI14618.1|  977|Homo sapiens ring finger protein 20
           protein.
          Length = 977

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 22/67 (32%), Positives = 35/67 (52%)
 Frame = +1

Query: 403 ENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDSEYDTLQILEATQMETI 582
           ENKKMA   A+  ++++ +  E  Q KL     ++ +LL ++D    T Q  E  Q + I
Sbjct: 693 ENKKMADEDALRKIRAVEEQIEYLQKKLAMAKQEEEALLSEMDV---TGQAFEDMQEQNI 749

Query: 583 EYLTQLR 603
             + QLR
Sbjct: 750 RLMQQLR 756


>AK022300-1|BAB14005.1|  746|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12238 fis, clone MAMMA1001260, weakly similar to
           HYPOTHETICAL 97.1 KD PROTEIN R05D3.4 IN CHROMOSOME III.
           ).
          Length = 746

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 22/67 (32%), Positives = 35/67 (52%)
 Frame = +1

Query: 403 ENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDSEYDTLQILEATQMETI 582
           ENKKMA   A+  ++++ +  E  Q KL     ++ +LL ++D    T Q  E  Q + I
Sbjct: 462 ENKKMADEDALRKIRAVEEQIEYLQKKLAMAKQEEEALLSEMDV---TGQAFEDMQEQNI 518

Query: 583 EYLTQLR 603
             + QLR
Sbjct: 519 RLMQQLR 525


>AK002051-1|BAA92057.1|  333|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11189 fis, clone PLACE1007547. ).
          Length = 333

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 22/67 (32%), Positives = 35/67 (52%)
 Frame = +1

Query: 403 ENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDSEYDTLQILEATQMETI 582
           ENKKMA   A+  ++++ +  E  Q KL     ++ +LL ++D    T Q  E  Q + I
Sbjct: 49  ENKKMADEDALRKIRAVEEQIEYLQKKLAMAKQEEEALLSEMDV---TGQAFEDMQEQNI 105

Query: 583 EYLTQLR 603
             + QLR
Sbjct: 106 RLMQQLR 112


>AK022532-1|BAB14081.1|  975|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12470 fis, clone NT2RM1000885, weakly similar to
           HYPOTHETICAL 97.1 KD PROTEIN R05D3.4 IN CHROMOSOME III.
           ).
          Length = 975

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 22/67 (32%), Positives = 35/67 (52%)
 Frame = +1

Query: 403 ENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDSEYDTLQILEATQMETI 582
           ENKKMA   A+  ++++ +  E  Q KL     ++ +LL ++D    T Q  E  Q + I
Sbjct: 691 ENKKMADEEALRKIRAVEEQIEYLQKKLAMAKQEEEALLSEMDV---TGQAFEDMQEQNI 747

Query: 583 EYLTQLR 603
             + QLR
Sbjct: 748 RLMQQLR 754


>D42054-1|BAA07654.2|  475|Homo sapiens KIAA0092 protein.
          Length = 475

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 27/129 (20%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
 Frame = +1

Query: 208 VMAEELQKVHLFYDDINKIKVLEENVLKDTEDLRDTCK---EYENKVQNFEXXXXXXXXX 378
           + AEE  K  L  + I   KVL+E + +      +  K   E  +++   E         
Sbjct: 89  IQAEESVKT-LSRETIEYKKVLDEQIQERENSKNEESKHNQELTSQLLAAENKCNLLEKQ 147

Query: 379 XXXXGDNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDSEYDTLQIL 558
                + +++ +M     +    S+ ++++ +Q  +Q+++ +K  LLEQ  ++  T+Q L
Sbjct: 148 LEYMRNMIKHAEMERTSVLEKQVSLERERQHDQTHVQSQL-EKLDLLEQEYNKLTTMQAL 206

Query: 559 EATQMETIE 585
              +M+ +E
Sbjct: 207 AEKKMQELE 215


>BC039711-1|AAH39711.1|  270|Homo sapiens CEP57 protein protein.
          Length = 270

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 27/129 (20%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
 Frame = +1

Query: 208 VMAEELQKVHLFYDDINKIKVLEENVLKDTEDLRDTCK---EYENKVQNFEXXXXXXXXX 378
           + AEE  K  L  + I   KVL+E + +      +  K   E  +++   E         
Sbjct: 88  IQAEESVKT-LSRETIEYKKVLDEQIQERENSKNEESKHNQELTSQLLAAENKCNLLEKQ 146

Query: 379 XXXXGDNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDSEYDTLQIL 558
                + +++ +M     +    S+ ++++ +Q  +Q+++ +K  LLEQ  ++  T+Q L
Sbjct: 147 LEYMRNMIKHAEMERTSVLEKQVSLERERQHDQTHVQSQL-EKLDLLEQEYNKLTTMQAL 205

Query: 559 EATQMETIE 585
              +M+ +E
Sbjct: 206 AEKKMQELE 214


>BC029385-1|AAH29385.1|  450|Homo sapiens CEP57 protein protein.
          Length = 450

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 27/129 (20%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
 Frame = +1

Query: 208 VMAEELQKVHLFYDDINKIKVLEENVLKDTEDLRDTCK---EYENKVQNFEXXXXXXXXX 378
           + AEE  K  L  + I   KVL+E + +      +  K   E  +++   E         
Sbjct: 88  IQAEESVKT-LSRETIEYKKVLDEQIQERENSKNEESKHNQELTSQLLAAENKCNLLEKQ 146

Query: 379 XXXXGDNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDSEYDTLQIL 558
                + +++ +M     +    S+ ++++ +Q  +Q+++ +K  LLEQ  ++  T+Q L
Sbjct: 147 LEYMRNMIKHAEMERTSVLEKQVSLERERQHDQTHVQSQL-EKLDLLEQEYNKLTTMQAL 205

Query: 559 EATQMETIE 585
              +M+ +E
Sbjct: 206 AEKKMQELE 214


>BC001233-1|AAH01233.1|  500|Homo sapiens centrosomal protein 57kDa
           protein.
          Length = 500

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 27/129 (20%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
 Frame = +1

Query: 208 VMAEELQKVHLFYDDINKIKVLEENVLKDTEDLRDTCK---EYENKVQNFEXXXXXXXXX 378
           + AEE  K  L  + I   KVL+E + +      +  K   E  +++   E         
Sbjct: 88  IQAEESVKT-LSRETIEYKKVLDEQIQERENSKNEESKHNQELTSQLLAAENKCNLLEKQ 146

Query: 379 XXXXGDNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDSEYDTLQIL 558
                + +++ +M     +    S+ ++++ +Q  +Q+++ +K  LLEQ  ++  T+Q L
Sbjct: 147 LEYMRNMIKHAEMERTSVLEKQVSLERERQHDQTHVQSQL-EKLDLLEQEYNKLTTMQAL 205

Query: 559 EATQMETIE 585
              +M+ +E
Sbjct: 206 AEKKMQELE 214


>AY239292-1|AAP72184.1|  500|Homo sapiens proliferation-inducing
           protein 8 protein.
          Length = 500

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 27/129 (20%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
 Frame = +1

Query: 208 VMAEELQKVHLFYDDINKIKVLEENVLKDTEDLRDTCK---EYENKVQNFEXXXXXXXXX 378
           + AEE  K  L  + I   KVL+E + +      +  K   E  +++   E         
Sbjct: 88  IQAEESVKT-LSRETIEYKKVLDEQIQERENSKNEESKHNQELTSQLLAAENKCNLLEKQ 146

Query: 379 XXXXGDNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDSEYDTLQIL 558
                + +++ +M     +    S+ ++++ +Q  +Q+++ +K  LLEQ  ++  T+Q L
Sbjct: 147 LEYMRNMIKHAEMERTSVLEKQVSLERERQHDQTHVQSQL-EKLDLLEQEYNKLTTMQAL 205

Query: 559 EATQMETIE 585
              +M+ +E
Sbjct: 206 AEKKMQELE 214


>AY225092-1|AAO73938.1|  500|Homo sapiens translokin protein.
          Length = 500

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 27/129 (20%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
 Frame = +1

Query: 208 VMAEELQKVHLFYDDINKIKVLEENVLKDTEDLRDTCK---EYENKVQNFEXXXXXXXXX 378
           + AEE  K  L  + I   KVL+E + +      +  K   E  +++   E         
Sbjct: 88  IQAEESVKT-LSRETIEYKKVLDEQIQERENSKNEESKHNQELTSQLLAAENKCNLLEKQ 146

Query: 379 XXXXGDNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDSEYDTLQIL 558
                + +++ +M     +    S+ ++++ +Q  +Q+++ +K  LLEQ  ++  T+Q L
Sbjct: 147 LEYMRNMIKHAEMERTSVLEKQVSLERERQHDQTHVQSQL-EKLDLLEQEYNKLTTMQAL 205

Query: 559 EATQMETIE 585
              +M+ +E
Sbjct: 206 AEKKMQELE 214


>BC033519-1|AAH33519.1|  287|Homo sapiens syntaxin 11 protein.
          Length = 287

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = +1

Query: 403 ENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQ----IDSEYDTLQILEATQ 570
           EN      GA   L  I + +  E L+L++ I D   L  Q    ++ + DTL ++E   
Sbjct: 191 ENLLADVKGARAALNEI-ESRHRELLRLESRIRDVHELFLQMAVLVEKQADTLNVIELNV 249

Query: 571 METIEYLTQLR 603
            +T++Y  Q +
Sbjct: 250 QKTVDYTGQAK 260


>AL135917-1|CAI22980.1|  287|Homo sapiens syntaxin 11 protein.
          Length = 287

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = +1

Query: 403 ENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQ----IDSEYDTLQILEATQ 570
           EN      GA   L  I + +  E L+L++ I D   L  Q    ++ + DTL ++E   
Sbjct: 191 ENLLADVKGARAALNEI-ESRHRELLRLESRIRDVHELFLQMAVLVEKQADTLNVIELNV 249

Query: 571 METIEYLTQLR 603
            +T++Y  Q +
Sbjct: 250 QKTVDYTGQAK 260


>AF071504-1|AAC24004.1|  287|Homo sapiens syntaxin 11 protein.
          Length = 287

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = +1

Query: 403 ENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQ----IDSEYDTLQILEATQ 570
           EN      GA   L  I + +  E L+L++ I D   L  Q    ++ + DTL ++E   
Sbjct: 191 ENLLADVKGARAALNEI-ESRHRELLRLESRIRDVHELFLQMAVLVEKQADTLNVIELNV 249

Query: 571 METIEYLTQLR 603
            +T++Y  Q +
Sbjct: 250 QKTVDYTGQAK 260


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,376,693
Number of Sequences: 237096
Number of extensions: 1004661
Number of successful extensions: 2601
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2596
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)