Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_O12
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006708-1|AAL77186.1| 129|Caenorhabditis elegans Hypothetical ... 52 7e-07
AL032637-17|CAD60427.1| 294|Caenorhabditis elegans Hypothetical... 32 0.64
Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical pr... 31 1.5
AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein. 31 1.5
Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 29 3.4
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 29 3.4
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 29 4.5
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 29 4.5
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 29 4.5
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 29 4.5
AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha ... 29 4.5
>AC006708-1|AAL77186.1| 129|Caenorhabditis elegans Hypothetical
protein Y110A7A.20 protein.
Length = 129
Score = 51.6 bits (118), Expect = 7e-07
Identities = 31/128 (24%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Frame = +1
Query: 217 EELQKVHLFYDDINKIKVLEENVLKDTEDLRDTCKEYENKVQNFEXXXXXXXXXXXXXGD 396
E+L K LF DD N++++++ +V + + +D E+ ++++NF+ +
Sbjct: 4 EQLAKAGLFVDDFNRLRLIDPDVAELLQSAQDKSSEFNDQLKNFQTTTGGLIDSIEEFAN 63
Query: 397 NVENKKMAAIGAMNLL-KSIAKDKESEQLKLQAEINDKTSLLEQIDSEYDTLQILEATQM 573
VE +K+ A+ N + +A+D + + LQ I + T E++ E + ++ +E Q
Sbjct: 64 VVETEKIRAMMVRNTQERDLAED---DPVLLQMTIRELTVEKERLRVELEAVRKIEKEQD 120
Query: 574 ETIEYLTQ 597
E I+ +T+
Sbjct: 121 ECIQMMTE 128
>AL032637-17|CAD60427.1| 294|Caenorhabditis elegans Hypothetical
protein Y43F8C.19 protein.
Length = 294
Score = 31.9 bits (69), Expect = 0.64
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = -2
Query: 533 LSICSNNEVLSLISACNFSCSDSLSLAIDFNKFIAPIAAIFLFSTLSPRSLIRSNSELII 354
LS+ ++++ + L + + S S + + F + I I TLS L+++++E II
Sbjct: 169 LSLRADSDFMKLDALQDLSIS-TFCFLVSFTLYFTSILYILKTKTLSHGKLLKNSTEFII 227
Query: 353 FSKFCTLFSYSLQV--SLKS 300
F C +FS+ L + +LKS
Sbjct: 228 FK--CAVFSFVLFIPNALKS 245
>Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical
protein F22B5.7 protein.
Length = 1415
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = -2
Query: 449 DFNKFIAPIAAIFLFSTLSPRSLIRSNSELIIFSKFCTL 333
DF + +A + ++ + SPRSL+ SNS+L++ K+CTL
Sbjct: 660 DFKQHLAALDSLVRLADTSPRSLL-SNSDLLL--KWCTL 695
>AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein.
Length = 1415
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = -2
Query: 449 DFNKFIAPIAAIFLFSTLSPRSLIRSNSELIIFSKFCTL 333
DF + +A + ++ + SPRSL+ SNS+L++ K+CTL
Sbjct: 660 DFKQHLAALDSLVRLADTSPRSLL-SNSDLLL--KWCTL 695
>Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical
protein Y41E3.16 protein.
Length = 720
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 355 FFQNFAPYFRTPYRCPLNLQYLSK 284
FF F RT YR PLNL Y+S+
Sbjct: 641 FFSEFCLLKRTDYRIPLNLHYVSQ 664
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 475 QLKLQAEINDKTSLLEQIDSEYDTLQILEATQMETIE-YLTQ 597
Q L EINDKT +E++ D+L+ + +++E +E LTQ
Sbjct: 996 QQTLSKEINDKTEEIERLMERIDSLEKVNHSRIEELESRLTQ 1037
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 475 QLKLQAEINDKTSLLEQIDSEYDTLQILEATQMETIE-YLTQ 597
Q L EINDKT +E++ D+L+ + +++E +E LTQ
Sbjct: 998 QQTLSKEINDKTEEIERLMERIDSLEKVNHSRIEELESRLTQ 1039
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 475 QLKLQAEINDKTSLLEQIDSEYDTLQILEATQMETIE-YLTQ 597
Q L EINDKT +E++ D+L+ + +++E +E LTQ
Sbjct: 998 QQTLSKEINDKTEEIERLMERIDSLEKVNHSRIEELESRLTQ 1039
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/107 (20%), Positives = 42/107 (39%)
Frame = +1
Query: 214 AEELQKVHLFYDDINKIKVLEENVLKDTEDLRDTCKEYENKVQNFEXXXXXXXXXXXXXG 393
A EL + ++ + E+ +L + EDL D ++ E G
Sbjct: 2088 ARELAREASVEKEVQDMNQREKKLLDEWEDLADQFDAVRSRANKAEQVLNECAQMEKYIG 2147
Query: 394 DNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDS 534
+ + IGA + +AK ++ ++AE + S LE ++S
Sbjct: 2148 --AKKNMLEGIGAPSTEPGVAKANRAQIQSMKAETEGEKSALEHVNS 2192
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/107 (20%), Positives = 42/107 (39%)
Frame = +1
Query: 214 AEELQKVHLFYDDINKIKVLEENVLKDTEDLRDTCKEYENKVQNFEXXXXXXXXXXXXXG 393
A EL + ++ + E+ +L + EDL D ++ E G
Sbjct: 2088 ARELAREASVEKEVQDMNQREKKLLDEWEDLADQFDAVRSRANKAEQVLNECAQMEKYIG 2147
Query: 394 DNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDS 534
+ + IGA + +AK ++ ++AE + S LE ++S
Sbjct: 2148 --AKKNMLEGIGAPSTEPGVAKANRAQIQSMKAETEGEKSALEHVNS 2192
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/107 (20%), Positives = 42/107 (39%)
Frame = +1
Query: 214 AEELQKVHLFYDDINKIKVLEENVLKDTEDLRDTCKEYENKVQNFEXXXXXXXXXXXXXG 393
A EL + ++ + E+ +L + EDL D ++ E G
Sbjct: 2088 ARELAREASVEKEVQDMNQREKKLLDEWEDLADQFDAVRSRANKAEQVLNECAQMEKYIG 2147
Query: 394 DNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDS 534
+ + IGA + +AK ++ ++AE + S LE ++S
Sbjct: 2148 --AKKNMLEGIGAPSTEPGVAKANRAQIQSMKAETEGEKSALEHVNS 2192
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/107 (20%), Positives = 42/107 (39%)
Frame = +1
Query: 214 AEELQKVHLFYDDINKIKVLEENVLKDTEDLRDTCKEYENKVQNFEXXXXXXXXXXXXXG 393
A EL + ++ + E+ +L + EDL D ++ E G
Sbjct: 2088 ARELAREASVEKEVQDMNQREKKLLDEWEDLADQFDAVRSRANKAEQVLNECAQMEKYIG 2147
Query: 394 DNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDS 534
+ + IGA + +AK ++ ++AE + S LE ++S
Sbjct: 2148 --AKKNMLEGIGAPSTEPGVAKANRAQIQSMKAETEGEKSALEHVNS 2192
>Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical
protein F59F5.6 protein.
Length = 1139
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Frame = +1
Query: 250 DINKIKVLEENVLKDTEDLRDTCKEYENKVQN-------FEXXXXXXXXXXXXXGDNVEN 408
D + I+ L N+L+D + L++ + Y+ +++N E N+
Sbjct: 32 DRDNIEQLMMNMLEDRDKLQEQLENYKVQLENAGLRTKEVEKERDMMKRQFEVHTQNLPQ 91
Query: 409 KKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQID 531
+ + LLK +K+ E ++L+AE N+ LLE ++
Sbjct: 92 ELQTMTRELCLLKEQLLEKDEEIVELKAERNNTRLLLEHLE 132
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/107 (20%), Positives = 42/107 (39%)
Frame = +1
Query: 214 AEELQKVHLFYDDINKIKVLEENVLKDTEDLRDTCKEYENKVQNFEXXXXXXXXXXXXXG 393
A EL + ++ + E+ +L + EDL D ++ E G
Sbjct: 2088 ARELAREASVEKEVQDMNQREKKLLDEWEDLADQFDAVRSRANKAEQVLNECAQMEKYIG 2147
Query: 394 DNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDS 534
+ + IGA + +AK ++ ++AE + S LE ++S
Sbjct: 2148 --AKKNMLEGIGAPSTEPGVAKANRAQIQSMKAETEGEKSALEHVNS 2192
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/107 (20%), Positives = 42/107 (39%)
Frame = +1
Query: 214 AEELQKVHLFYDDINKIKVLEENVLKDTEDLRDTCKEYENKVQNFEXXXXXXXXXXXXXG 393
A EL + ++ + E+ +L + EDL D ++ E G
Sbjct: 2088 ARELAREASVEKEVQDMNQREKKLLDEWEDLADQFDAVRSRANKAEQVLNECAQMEKYIG 2147
Query: 394 DNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDS 534
+ + IGA + +AK ++ ++AE + S LE ++S
Sbjct: 2148 --AKKNMLEGIGAPSTEPGVAKANRAQIQSMKAETEGEKSALEHVNS 2192
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/107 (20%), Positives = 42/107 (39%)
Frame = +1
Query: 214 AEELQKVHLFYDDINKIKVLEENVLKDTEDLRDTCKEYENKVQNFEXXXXXXXXXXXXXG 393
A EL + ++ + E+ +L + EDL D ++ E G
Sbjct: 2088 ARELAREASVEKEVQDMNQREKKLLDEWEDLADQFDAVRSRANKAEQVLNECAQMEKYIG 2147
Query: 394 DNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDS 534
+ + IGA + +AK ++ ++AE + S LE ++S
Sbjct: 2148 --AKKNMLEGIGAPSTEPGVAKANRAQIQSMKAETEGEKSALEHVNS 2192
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/107 (20%), Positives = 42/107 (39%)
Frame = +1
Query: 214 AEELQKVHLFYDDINKIKVLEENVLKDTEDLRDTCKEYENKVQNFEXXXXXXXXXXXXXG 393
A EL + ++ + E+ +L + EDL D ++ E G
Sbjct: 2088 ARELAREASVEKEVQDMNQREKKLLDEWEDLADQFDAVRSRANKAEQVLNECAQMEKYIG 2147
Query: 394 DNVENKKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQIDS 534
+ + IGA + +AK ++ ++AE + S LE ++S
Sbjct: 2148 --AKKNMLEGIGAPSTEPGVAKANRAQIQSMKAETEGEKSALEHVNS 2192
>AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha
homolog SYD-2 protein.
Length = 1139
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Frame = +1
Query: 250 DINKIKVLEENVLKDTEDLRDTCKEYENKVQN-------FEXXXXXXXXXXXXXGDNVEN 408
D + I+ L N+L+D + L++ + Y+ +++N E N+
Sbjct: 32 DRDNIEQLMMNMLEDRDKLQEQLENYKVQLENAGLRTKEVEKERDMMKRQFEVHTQNLPQ 91
Query: 409 KKMAAIGAMNLLKSIAKDKESEQLKLQAEINDKTSLLEQID 531
+ + LLK +K+ E ++L+AE N+ LLE ++
Sbjct: 92 ELQTMTRELCLLKEQLLEKDEEIVELKAERNNTRLLLEHLE 132
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,502,425
Number of Sequences: 27780
Number of extensions: 185241
Number of successful extensions: 627
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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