Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_O11
(892 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC060853-1|AAH60853.1| 190|Homo sapiens hematological and neuro... 36 0.20
BC014438-1|AAH14438.1| 190|Homo sapiens hematological and neuro... 36 0.20
AY598330-1|AAT06741.1| 190|Homo sapiens L11 protein. 36 0.20
AY323831-1|AAP72616.1| 190|Homo sapiens hematological and neuro... 36 0.20
AL031710-2|CAM26365.1| 190|Homo sapiens chromosome 16 open read... 36 0.20
AL031009-2|CAA19770.2| 190|Homo sapiens chromosome 16 open read... 36 0.20
AK023154-1|BAB14434.1| 190|Homo sapiens protein ( Homo sapiens ... 36 0.20
AE006639-3|AAK61289.1| 190|Homo sapiens HN1 like protein. 36 0.20
BC001420-1|AAH01420.1| 154|Homo sapiens hematological and neuro... 36 0.26
AY322169-1|AAP83838.1| 181|Homo sapiens hematological and neuro... 36 0.26
AK223321-1|BAD97041.1| 154|Homo sapiens hematological and neuro... 36 0.26
AF348672-2|AAL83903.1| 154|Homo sapiens hematological and neuro... 36 0.26
AF348672-1|AAP83962.1| 181|Homo sapiens hematological and neuro... 36 0.26
AF266847-1|AAQ14299.1| 154|Homo sapiens androgen-regulated prot... 36 0.26
AF266846-1|AAQ14298.1| 154|Homo sapiens androgen-regulated prot... 36 0.26
AF177862-1|AAD53312.1| 154|Homo sapiens HN1 protein protein. 36 0.26
AF086910-1|AAP97140.1| 154|Homo sapiens Hn1 protein. 36 0.26
BC052950-1|AAH52950.1| 1008|Homo sapiens G protein regulated ind... 35 0.34
AL834165-1|CAD38868.1| 707|Homo sapiens hypothetical protein pr... 35 0.34
AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive dom... 35 0.34
AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive dom... 35 0.34
AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor ... 35 0.34
AB067480-1|BAB67786.1| 800|Homo sapiens KIAA1893 protein protein. 35 0.34
AB065600-1|BAC05828.1| 727|Homo sapiens seven transmembrane hel... 35 0.34
AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein... 33 1.4
AK056544-1|BAB71212.1| 1034|Homo sapiens protein ( Homo sapiens ... 33 1.4
BC009326-1|AAH09326.2| 595|Homo sapiens SCARF2 protein protein. 32 2.4
BC000584-1|AAH00584.2| 243|Homo sapiens SCARF2 protein protein. 32 2.4
AF522196-1|AAN45861.1| 870|Homo sapiens scavenger receptor type... 32 2.4
AB052951-1|BAC53753.1| 866|Homo sapiens SRECRP-1 protein. 32 2.4
AB024433-1|BAD93345.1| 866|Homo sapiens NSR1 protein. 32 2.4
AK055979-1|BAB71063.1| 710|Homo sapiens protein ( Homo sapiens ... 31 7.4
AF317634-1|AAL26903.1| 616|Homo sapiens HRD1 protein. 31 7.4
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 7.4
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 31 7.4
AB085847-1|BAC24801.1| 616|Homo sapiens HRD1 protein. 31 7.4
AB058713-1|BAB47439.1| 579|Homo sapiens KIAA1810 protein protein. 31 7.4
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 7.4
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 31 7.4
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 7.4
AK128093-1|BAC87272.1| 208|Homo sapiens protein ( Homo sapiens ... 30 9.8
AK000226-1|BAA91021.1| 651|Homo sapiens protein ( Homo sapiens ... 30 9.8
AJ000517-1|CAA04154.1| 892|Homo sapiens spinocerebellar ataxia ... 30 9.8
AF301909-1|AAG33495.1| 845|Homo sapiens mu-protocadherin protein. 30 9.8
AF032105-1|AAC39765.1| 892|Homo sapiens ataxin-7 protein. 30 9.8
AF032102-1|AAC19162.1| 131|Homo sapiens ataxin-7 protein. 30 9.8
AF020276-1|AAB87863.1| 129|Homo sapiens spinocerebellar ataxia ... 30 9.8
>BC060853-1|AAH60853.1| 190|Homo sapiens hematological and
neurological expressed 1-like protein.
Length = 190
Score = 35.9 bits (79), Expect = 0.20
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 110 FNVGLNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPK 283
F V ++G R SR ++PPGG +N+F S E + R P+ ++ G +EP+
Sbjct: 2 FQVPDSEGGRAGSRAMKPPGGESSNLFGSPEEATPSSR----PNRMASNIFGPTEEPQ 55
>BC014438-1|AAH14438.1| 190|Homo sapiens hematological and
neurological expressed 1-like protein.
Length = 190
Score = 35.9 bits (79), Expect = 0.20
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 110 FNVGLNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPK 283
F V ++G R SR ++PPGG +N+F S E + R P+ ++ G +EP+
Sbjct: 2 FQVPDSEGGRAGSRAMKPPGGESSNLFGSPEEATPSSR----PNRMASNIFGPTEEPQ 55
>AY598330-1|AAT06741.1| 190|Homo sapiens L11 protein.
Length = 190
Score = 35.9 bits (79), Expect = 0.20
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 110 FNVGLNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPK 283
F V ++G R SR ++PPGG +N+F S E + R P+ ++ G +EP+
Sbjct: 2 FQVPDSEGGRAGSRAMKPPGGESSNLFGSPEEATPSSR----PNRMASNIFGPTEEPQ 55
>AY323831-1|AAP72616.1| 190|Homo sapiens hematological and
neurological expressed gene 1-like protein-like protein
protein.
Length = 190
Score = 35.9 bits (79), Expect = 0.20
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 110 FNVGLNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPK 283
F V ++G R SR ++PPGG +N+F S E + R P+ ++ G +EP+
Sbjct: 2 FQVPDSEGGRAGSRAMKPPGGESSNLFGSPEEATPSSR----PNRMASNIFGPTEEPQ 55
>AL031710-2|CAM26365.1| 190|Homo sapiens chromosome 16 open reading
frame 34 protein.
Length = 190
Score = 35.9 bits (79), Expect = 0.20
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 110 FNVGLNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPK 283
F V ++G R SR ++PPGG +N+F S E + R P+ ++ G +EP+
Sbjct: 2 FQVPDSEGGRAGSRAMKPPGGESSNLFGSPEEATPSSR----PNRMASNIFGPTEEPQ 55
>AL031009-2|CAA19770.2| 190|Homo sapiens chromosome 16 open reading
frame 34 protein.
Length = 190
Score = 35.9 bits (79), Expect = 0.20
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 110 FNVGLNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPK 283
F V ++G R SR ++PPGG +N+F S E + R P+ ++ G +EP+
Sbjct: 2 FQVPDSEGGRAGSRAMKPPGGESSNLFGSPEEATPSSR----PNRMASNIFGPTEEPQ 55
>AK023154-1|BAB14434.1| 190|Homo sapiens protein ( Homo sapiens
cDNA FLJ13092 fis, clone NT2RP3002147. ).
Length = 190
Score = 35.9 bits (79), Expect = 0.20
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 110 FNVGLNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPK 283
F V ++G R SR ++PPGG +N+F S E + R P+ ++ G +EP+
Sbjct: 2 FQVPDSEGGRAGSRAMKPPGGESSNLFGSPEEATPSSR----PNRMASNIFGPTEEPQ 55
>AE006639-3|AAK61289.1| 190|Homo sapiens HN1 like protein.
Length = 190
Score = 35.9 bits (79), Expect = 0.20
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 110 FNVGLNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPK 283
F V ++G R SR ++PPGG +N+F S E + R P+ ++ G +EP+
Sbjct: 2 FQVPDSEGGRAGSRAMKPPGGESSNLFGSPEEATPSSR----PNRMASNIFGPTEEPQ 55
>BC001420-1|AAH01420.1| 154|Homo sapiens hematological and
neurological expressed 1 protein.
Length = 154
Score = 35.5 bits (78), Expect = 0.26
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +2
Query: 95 MTSTPFNVGLNDGARLSSRVLRPPGGGHTNI---FDSEPEPP 211
MT+T G++ +R SSRVLRPPGGG +N FD E P
Sbjct: 1 MTTTTTFKGVDPNSRNSSRVLRPPGGG-SNFSLGFDEPTEQP 41
>AY322169-1|AAP83838.1| 181|Homo sapiens hematological and
neurological expressed protein 1B protein.
Length = 181
Score = 35.5 bits (78), Expect = 0.26
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +2
Query: 95 MTSTPFNVGLNDGARLSSRVLRPPGGGHTNI---FDSEPEPP 211
MT+T G++ +R SSRVLRPPGGG +N FD E P
Sbjct: 1 MTTTTTFKGVDPNSRNSSRVLRPPGGG-SNFSLGFDEPTEQP 41
>AK223321-1|BAD97041.1| 154|Homo sapiens hematological and
neurological expressed 1 isoform 1 variant protein.
Length = 154
Score = 35.5 bits (78), Expect = 0.26
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +2
Query: 95 MTSTPFNVGLNDGARLSSRVLRPPGGGHTNI---FDSEPEPP 211
MT+T G++ +R SSRVLRPPGGG +N FD E P
Sbjct: 1 MTTTTTFKGVDPNSRNSSRVLRPPGGG-SNFSLGFDEPTEQP 41
>AF348672-2|AAL83903.1| 154|Homo sapiens hematological and
neurological expressed gene 1-like protein variant a
protein.
Length = 154
Score = 35.5 bits (78), Expect = 0.26
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +2
Query: 95 MTSTPFNVGLNDGARLSSRVLRPPGGGHTNI---FDSEPEPP 211
MT+T G++ +R SSRVLRPPGGG +N FD E P
Sbjct: 1 MTTTTTFKGVDPNSRNSSRVLRPPGGG-SNFSLGFDEPTEQP 41
>AF348672-1|AAP83962.1| 181|Homo sapiens hematological and
neurological expressed gene 1-like protein variant b
protein.
Length = 181
Score = 35.5 bits (78), Expect = 0.26
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +2
Query: 95 MTSTPFNVGLNDGARLSSRVLRPPGGGHTNI---FDSEPEPP 211
MT+T G++ +R SSRVLRPPGGG +N FD E P
Sbjct: 1 MTTTTTFKGVDPNSRNSSRVLRPPGGG-SNFSLGFDEPTEQP 41
>AF266847-1|AAQ14299.1| 154|Homo sapiens androgen-regulated protein
2 protein.
Length = 154
Score = 35.5 bits (78), Expect = 0.26
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +2
Query: 95 MTSTPFNVGLNDGARLSSRVLRPPGGGHTNI---FDSEPEPP 211
MT+T G++ +R SSRVLRPPGGG +N FD E P
Sbjct: 1 MTTTTTFKGVDPNSRNSSRVLRPPGGG-SNFSLGFDEPTEQP 41
>AF266846-1|AAQ14298.1| 154|Homo sapiens androgen-regulated protein
2 protein.
Length = 154
Score = 35.5 bits (78), Expect = 0.26
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +2
Query: 95 MTSTPFNVGLNDGARLSSRVLRPPGGGHTNI---FDSEPEPP 211
MT+T G++ +R SSRVLRPPGGG +N FD E P
Sbjct: 1 MTTTTTFKGVDPNSRNSSRVLRPPGGG-SNFSLGFDEPTEQP 41
>AF177862-1|AAD53312.1| 154|Homo sapiens HN1 protein protein.
Length = 154
Score = 35.5 bits (78), Expect = 0.26
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +2
Query: 95 MTSTPFNVGLNDGARLSSRVLRPPGGGHTNI---FDSEPEPP 211
MT+T G++ +R SSRVLRPPGGG +N FD E P
Sbjct: 1 MTTTTTFKGVDPNSRNSSRVLRPPGGG-SNFSLGFDEPTEQP 41
>AF086910-1|AAP97140.1| 154|Homo sapiens Hn1 protein.
Length = 154
Score = 35.5 bits (78), Expect = 0.26
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +2
Query: 95 MTSTPFNVGLNDGARLSSRVLRPPGGGHTNI---FDSEPEPP 211
MT+T G++ +R SSRVLRPPGGG +N FD E P
Sbjct: 1 MTTTTTFKGVDPNSRNSSRVLRPPGGG-SNFSLGFDEPTEQP 41
>BC052950-1|AAH52950.1| 1008|Homo sapiens G protein regulated
inducer of neurite outgrowth 1 protein.
Length = 1008
Score = 35.1 bits (77), Expect = 0.34
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 137 RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATST--FSHGQGDEPKATNGTSVAT 310
+ SS + P G TN S P PR+ A PPSA + G+GD P ++ +
Sbjct: 473 KTSSEKVNPESSGKTNPVSSGPGDPRSLGTAGPPSAVKAEPATGGKGD-PLSSEKAGLVA 531
Query: 311 NGQSTPKES 337
+G++ P S
Sbjct: 532 SGKAAPTAS 540
>AL834165-1|CAD38868.1| 707|Homo sapiens hypothetical protein
protein.
Length = 707
Score = 35.1 bits (77), Expect = 0.34
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 137 RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATST--FSHGQGDEPKATNGTSVAT 310
+ SS + P G TN S P PR+ A PPSA + G+GD P ++ +
Sbjct: 283 KTSSEKVNPESSGKTNPVSSGPGDPRSLGTAGPPSAVKAEPATGGKGD-PLSSEKAGLVA 341
Query: 311 NGQSTPKES 337
+G++ P S
Sbjct: 342 SGKAAPTAS 350
>AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 35.1 bits (77), Expect = 0.34
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 125 NDGAR--LSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGT 298
N G R L++ + PPGGG D PP + A+PP A F G P A
Sbjct: 106 NAGPRPALNNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYG-FGQPYGRSPSAVAAA 164
Query: 299 SVAT-NGQSTPKESP 340
+ A + Q ++SP
Sbjct: 165 AAAVFHQQHGGQQSP 179
>AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 35.1 bits (77), Expect = 0.34
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 125 NDGAR--LSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGT 298
N G R L++ + PPGGG D PP + A+PP A F G P A
Sbjct: 106 NAGPRPALNNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYG-FGQPYGRSPSAVAAA 164
Query: 299 SVAT-NGQSTPKESP 340
+ A + Q ++SP
Sbjct: 165 AAAVFHQQHGGQQSP 179
>AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor
250a protein.
Length = 2285
Score = 35.1 bits (77), Expect = 0.34
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 125 NDGAR--LSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGT 298
N G R L++ + PPGGG D PP + A+PP A F G P A
Sbjct: 106 NAGPRPALNNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYG-FGQPYGRSPSAVAAA 164
Query: 299 SVAT-NGQSTPKESP 340
+ A + Q ++SP
Sbjct: 165 AAAVFHQQHGGQQSP 179
>AB067480-1|BAB67786.1| 800|Homo sapiens KIAA1893 protein protein.
Length = 800
Score = 35.1 bits (77), Expect = 0.34
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 137 RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATST--FSHGQGDEPKATNGTSVAT 310
+ SS + P G TN S P PR+ A PPSA + G+GD P ++ +
Sbjct: 475 KTSSEKVNPESSGKTNPVSSGPGDPRSLGTAGPPSAVKAEPATGGKGD-PLSSEKAGLVA 533
Query: 311 NGQSTPKES 337
+G++ P S
Sbjct: 534 SGKAAPTAS 542
>AB065600-1|BAC05828.1| 727|Homo sapiens seven transmembrane helix
receptor protein.
Length = 727
Score = 35.1 bits (77), Expect = 0.34
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -2
Query: 279 GSSPCPWLKVLVALG--GTARRPVLGGSGSESKMLV*PPPGGRSTL 148
GS CPW +L+ G P+L + + + MLV PP GGR++L
Sbjct: 243 GSERCPWASLLLPCSACGAVPSPLLSSASARNAMLVVPP-GGRASL 287
>AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein 3
protein.
Length = 1386
Score = 33.1 bits (72), Expect = 1.4
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +2
Query: 116 VGLNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFS-HGQGDEPKATN 292
V L G R+S RV P GG T + P T R +PP QG E
Sbjct: 696 VQLVQGFRVSWRVAGPEGGSWTMLDLQSPSQQSTVLRGLPPGTQIQIKVQAQGQEGLGAE 755
Query: 293 GTSVATNGQSTPKESP 340
SV +S P+E+P
Sbjct: 756 SLSVT---RSIPEEAP 768
>AK056544-1|BAB71212.1| 1034|Homo sapiens protein ( Homo sapiens
cDNA FLJ31982 fis, clone NT2RP7008550, highly similar to
Mus musculus rig-1 protein mRNA. ).
Length = 1034
Score = 33.1 bits (72), Expect = 1.4
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +2
Query: 116 VGLNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFS-HGQGDEPKATN 292
V L G R+S RV P GG T + P T R +PP QG E
Sbjct: 696 VQLVQGFRVSWRVAGPEGGSWTMLDLQSPSQQSTVLRGLPPGTQIQIKVQAQGQEGLGAE 755
Query: 293 GTSVATNGQSTPKESP 340
SV +S P+E+P
Sbjct: 756 SLSVT---RSIPEEAP 768
>BC009326-1|AAH09326.2| 595|Homo sapiens SCARF2 protein protein.
Length = 595
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 197 EPEPPRTGRRAVPPSATS---TFSHGQGDEPKATNGTSVATNGQSTPKESPEPQIQQEAP 367
+P PP+ +R+VPP++ + + G E AT+ + T + TP + P + +EA
Sbjct: 525 KPAPPQKAKRSVPPASPARAPPATETPGPEKAATDLPAPETPRKKTPIQKPPRKKSREAA 584
Query: 368 G 370
G
Sbjct: 585 G 585
>BC000584-1|AAH00584.2| 243|Homo sapiens SCARF2 protein protein.
Length = 243
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 197 EPEPPRTGRRAVPPSATS---TFSHGQGDEPKATNGTSVATNGQSTPKESPEPQIQQEAP 367
+P PP+ +R+VPP++ + + G E AT+ + T + TP + P + +EA
Sbjct: 173 KPAPPQKAKRSVPPASPARAPPATETPGPEKAATDLPAPETPRKKTPIQKPPRKKSREAA 232
Query: 368 G 370
G
Sbjct: 233 G 233
>AF522196-1|AAN45861.1| 870|Homo sapiens scavenger receptor type F
protein.
Length = 870
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 197 EPEPPRTGRRAVPPSATS---TFSHGQGDEPKATNGTSVATNGQSTPKESPEPQIQQEAP 367
+P PP+ +R+VPP++ + + G E AT+ + T + TP + P + +EA
Sbjct: 800 KPAPPQKAKRSVPPASPARAPPATETPGPEKAATDLPAPETPRKKTPIQKPPRKKSREAA 859
Query: 368 G 370
G
Sbjct: 860 G 860
>AB052951-1|BAC53753.1| 866|Homo sapiens SRECRP-1 protein.
Length = 866
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 197 EPEPPRTGRRAVPPSATS---TFSHGQGDEPKATNGTSVATNGQSTPKESPEPQIQQEAP 367
+P PP+ +R+VPP++ + + G E AT+ + T + TP + P + +EA
Sbjct: 796 KPAPPQKAKRSVPPASPARAPPATETPGPEKAATDLPAPETPRKKTPIQKPPRKKSREAA 855
Query: 368 G 370
G
Sbjct: 856 G 856
>AB024433-1|BAD93345.1| 866|Homo sapiens NSR1 protein.
Length = 866
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 197 EPEPPRTGRRAVPPSATS---TFSHGQGDEPKATNGTSVATNGQSTPKESPEPQIQQEAP 367
+P PP+ +R+VPP++ + + G E AT+ + T + TP + P + +EA
Sbjct: 796 KPAPPQKAKRSVPPASPARAPPATETPGPEKAATDLPAPETPRKKTPIQKPPRKKSREAA 855
Query: 368 G 370
G
Sbjct: 856 G 856
>AK055979-1|BAB71063.1| 710|Homo sapiens protein ( Homo sapiens
cDNA FLJ31417 fis, clone NT2NE2000327, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 710
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/78 (24%), Positives = 31/78 (39%)
Frame = +2
Query: 95 MTSTPFNVGLNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGD 274
M+S+ L ++L + P H + PP T A+PP+ +T S +
Sbjct: 214 MSSSKVTTVLRPTSQLPNAATAQPAVQHIIHQPIQSRPPVTTSNAIPPAVVATVSATRAQ 273
Query: 275 EPKATNGTSVATNGQSTP 328
P T + AT+ P
Sbjct: 274 SPVITTTAAHATDSALRP 291
>AF317634-1|AAL26903.1| 616|Homo sapiens HRD1 protein.
Length = 616
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = +2
Query: 188 FDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTS--VATNGQSTPKESPEPQIQQE 361
F P PP +G PPS ++ S G GTS A+ S P P+
Sbjct: 391 FPPVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTSATAASATASGPGSGSAPE-AGP 449
Query: 362 APG 370
APG
Sbjct: 450 APG 452
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Frame = +2
Query: 191 DSEPEPPRTGRRAVP-PSATSTFSHGQGDEPKATNGTS-------VATNGQSTPKESPEP 346
DS PEP RA+P S + + S G+G P+ ++ T + + + SPEP
Sbjct: 1619 DSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEP 1678
Query: 347 QIQQEAP 367
+ + P
Sbjct: 1679 KTKSRTP 1685
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Frame = +2
Query: 191 DSEPEPPRTGRRAVP-PSATSTFSHGQGDEPKATNGTS-------VATNGQSTPKESPEP 346
DS PEP RA+P S + + S G+G P+ ++ T + + + SPEP
Sbjct: 651 DSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEP 710
Query: 347 QIQQEAP 367
+ + P
Sbjct: 711 KTKSRTP 717
>AB085847-1|BAC24801.1| 616|Homo sapiens HRD1 protein.
Length = 616
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = +2
Query: 188 FDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTS--VATNGQSTPKESPEPQIQQE 361
F P PP +G PPS ++ S G GTS A+ S P P+
Sbjct: 391 FPPVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTSATAASATASGPGSGSAPE-AGP 449
Query: 362 APG 370
APG
Sbjct: 450 APG 452
>AB058713-1|BAB47439.1| 579|Homo sapiens KIAA1810 protein protein.
Length = 579
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = +2
Query: 188 FDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTS--VATNGQSTPKESPEPQIQQE 361
F P PP +G PPS ++ S G GTS A+ S P P+
Sbjct: 354 FPPVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTSATAASATASGPGSGSAPE-AGP 412
Query: 362 APG 370
APG
Sbjct: 413 APG 415
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Frame = +2
Query: 191 DSEPEPPRTGRRAVP-PSATSTFSHGQGDEPKATNGTS-------VATNGQSTPKESPEP 346
DS PEP RA+P S + + S G+G P+ ++ T + + + SPEP
Sbjct: 1619 DSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEP 1678
Query: 347 QIQQEAP 367
+ + P
Sbjct: 1679 KTKSRTP 1685
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Frame = +2
Query: 191 DSEPEPPRTGRRAVP-PSATSTFSHGQGDEPKATNGTS-------VATNGQSTPKESPEP 346
DS PEP RA+P S + + S G+G P+ ++ T + + + SPEP
Sbjct: 142 DSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEP 201
Query: 347 QIQQEAP 367
+ + P
Sbjct: 202 KTKSRTP 208
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Frame = +2
Query: 191 DSEPEPPRTGRRAVP-PSATSTFSHGQGDEPKATNGTS-------VATNGQSTPKESPEP 346
DS PEP RA+P S + + S G+G P+ ++ T + + + SPEP
Sbjct: 1667 DSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEP 1726
Query: 347 QIQQEAP 367
+ + P
Sbjct: 1727 KTKSRTP 1733
>AK128093-1|BAC87272.1| 208|Homo sapiens protein ( Homo sapiens
cDNA FLJ46214 fis, clone TESTI4012623. ).
Length = 208
Score = 30.3 bits (65), Expect = 9.8
Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Frame = +2
Query: 101 STPFNVGLNDGARLS--SRVLRPPGGGHTNIFDSEPEPP-RTGRRAVPPSATSTFSHGQG 271
S P + G G R +R+ RPPG F P PP TG P +A G G
Sbjct: 33 SPPVSQGPGVGPRTGRGNRLCRPPGRSAARSFCLLPGPPLGTGALGSPRAAQGLGFRGSG 92
Query: 272 DEPKATNGTSVATNGQSTP 328
+ + TS + G P
Sbjct: 93 QRARHNSFTSPSPPGAHHP 111
>AK000226-1|BAA91021.1| 651|Homo sapiens protein ( Homo sapiens
cDNA FLJ20219 fis, clone COLF3371. ).
Length = 651
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 161 PPGGGHTNIFD-SEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKES 337
P GG T + + E PR + PS TS+ G+G P +GT++ STP S
Sbjct: 299 PEAGGTTGPWTGTTSEVPRPPEPSQGPSTTSS---GEGTGPHPPSGTTLRPPTSSTPGGS 355
Query: 338 P 340
P
Sbjct: 356 P 356
>AJ000517-1|CAA04154.1| 892|Homo sapiens spinocerebellar ataxia 7
protein.
Length = 892
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 EPEPPRTGRRA-VPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQIQQ 358
+P PP+ R+ PP T G +T+ ++AT G+ P SPE + Q
Sbjct: 39 QPPPPQPQRQQHPPPPPRRTRPEDGGPGAASTSAAAMATVGERRPLPSPEVMLGQ 93
>AF301909-1|AAG33495.1| 845|Homo sapiens mu-protocadherin protein.
Length = 845
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 161 PPGGGHTNIFD-SEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKES 337
P GG T + + E PR + PS TS+ G+G P +GT++ STP S
Sbjct: 465 PEAGGTTGPWTGTTSEVPRPPEPSQGPSTTSS---GEGTGPHPPSGTTLRPPTSSTPGGS 521
Query: 338 P 340
P
Sbjct: 522 P 522
>AF032105-1|AAC39765.1| 892|Homo sapiens ataxin-7 protein.
Length = 892
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 EPEPPRTGRRA-VPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQIQQ 358
+P PP+ R+ PP T G +T+ ++AT G+ P SPE + Q
Sbjct: 39 QPPPPQPQRQQHPPPPPRRTRPEDGGPGAASTSAAAMATVGERRPLPSPEVMLGQ 93
>AF032102-1|AAC19162.1| 131|Homo sapiens ataxin-7 protein.
Length = 131
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 EPEPPRTGRRA-VPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQIQQ 358
+P PP+ R+ PP T G +T+ ++AT G+ P SPE + Q
Sbjct: 39 QPPPPQPQRQQHPPPPPRRTRPEDGGPGAASTSAAAMATVGERRPLPSPEVMLGQ 93
>AF020276-1|AAB87863.1| 129|Homo sapiens spinocerebellar ataxia 7
protein.
Length = 129
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 EPEPPRTGRRA-VPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQIQQ 358
+P PP+ R+ PP T G +T+ ++AT G+ P SPE + Q
Sbjct: 37 QPPPPQPQRQQHPPPPPRRTRPEDGGPGAASTSAAAMATVGERRPLPSPEVMLGQ 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,574,760
Number of Sequences: 237096
Number of extensions: 2494608
Number of successful extensions: 7688
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 6861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7651
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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