Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_O07
         (860 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1263 + 25279899-25279985,25280263-25282372,25282700-252827...    30   2.1  
01_05_0680 - 24238840-24241242                                         29   4.8  

>07_03_1263 +
           25279899-25279985,25280263-25282372,25282700-25282793,
           25283178-25283314,25283419-25283454,25283602-25283642,
           25284036-25284125,25284229-25284284,25284947-25285030,
           25285072-25285150
          Length = 937

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 426 EHLQVWGELHYQVSKSLILHGCC 358
           E L+  G  H Q++ S++LHGCC
Sbjct: 412 ERLKYQGFKHDQITYSIVLHGCC 434


>01_05_0680 - 24238840-24241242
          Length = 800

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = -1

Query: 599 LDKMNVIGMNTKIL*NNLAIYNYISNVT*VHEISNRRQPSRAQEKKLMPKDYTYYTLMNT 420
           LD+MN + +   +L  N+ I  Y+ N   + E    R      E+K+MP D TY  L+  
Sbjct: 724 LDEMNRLDIRPNVLMYNMLINGYLRNGK-LQEAF--RLHDEMLERKIMPDDTTYDILVGM 780

Query: 419 YKCGA 405
              G+
Sbjct: 781 KSLGS 785


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,670,615
Number of Sequences: 37544
Number of extensions: 221179
Number of successful extensions: 289
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 289
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)