Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_O03
         (887 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   1.2  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   3.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   3.7  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    23   4.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.5  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    22   8.6  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   8.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = +3

Query: 657  SNTCSNTQHDSG--QKKLXPEVISDRVRAGAGANGISLEDSISPXXPTSETQSQ 812
            + T + T +  G  Q    P  +S+ +  G+GANG  L++ I     T   + Q
Sbjct: 1247 AETSAGTSNSRGAAQMSKVPRDVSEGIYDGSGANGSFLDNLIRSSLETGIPRDQ 1300


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 403 LWTKKGYDLAFKACGCRCGRGHLKK 477
           +W +   D+   AC   C  G +KK
Sbjct: 436 IWARGTKDIPISACSLPCEPGMIKK 460


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 403 LWTKKGYDLAFKACGCRCGRGHLKK 477
           +W +   D+   AC   C  G +KK
Sbjct: 526 IWARGTKDIPISACSLPCEPGMIKK 550


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
 Frame = +1

Query: 325 WETGVLAYLKSCGRARSWSERQRHQNLWTKKG-YD 426
           W  GV+ Y+   G    W E Q       K G YD
Sbjct: 96  WACGVILYILLVGYPPFWDEDQHRLYAQIKTGSYD 130


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 368  LVPGQNDNGIRICGQKKVTTWHSRHAA 448
            LVPG   N   +   +  TT+H R  A
Sbjct: 928  LVPGSQQNVAGVFNLRPATTYHLRIVA 954


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 286 CTCRCCISRGQRLQCVPLPEAG 221
           C CR    R ++  CVP  + G
Sbjct: 71  CVCRLGYLRNKKKVCVPRSKCG 92


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 470 KCPRPHRQPHALNAK 426
           KCPR HR   A N K
Sbjct: 109 KCPRRHRPVCASNGK 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,935
Number of Sequences: 438
Number of extensions: 5237
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)