Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_N23
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 158 6e-39
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 158 6e-39
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 80 2e-15
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 80 2e-15
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 80 2e-15
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 77 2e-14
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 53 3e-07
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 48 9e-06
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 38 0.010
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 37 0.022
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 37 0.022
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 37 0.022
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 35 0.089
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 31 0.83
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 31 1.4
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 3.3
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 29 4.4
AC024805-10|AAK39342.3| 1058|Caenorhabditis elegans Hypothetical... 29 5.8
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 28 7.7
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 158 bits (383), Expect = 6e-39
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRK 372
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG IEPSLR LA KYNC+K ICRK
Sbjct: 39 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRK 98
Query: 373 CYARLHPRATNCRKTKCGHTNNLR 444
CYARL PRA+NCRK KCGH++ LR
Sbjct: 99 CYARLPPRASNCRKKKCGHSSELR 122
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 39
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 158 bits (383), Expect = 6e-39
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRK 372
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG IEPSLR LA KYNC+K ICRK
Sbjct: 39 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRK 98
Query: 373 CYARLHPRATNCRKTKCGHTNNLR 444
CYARL PRA+NCRK KCGH++ LR
Sbjct: 99 CYARLPPRASNCRKKKCGHSSELR 122
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 39
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 39
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 115
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 191
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 267
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 343
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 495
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 39 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 115 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 77.8 bits (183), Expect = 1e-14
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTL GKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPD 419
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 39
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 115
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 191
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 267
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 343
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 495
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 571
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 647
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 723
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 799
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTI 312
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG I
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGDI 838
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 39 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 115 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
Score = 77.8 bits (183), Expect = 1e-14
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTL GKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPD 419
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 39
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 115
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 191
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 267
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 343
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 419
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 495
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 571
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 647
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 723
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP+
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 799
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 39 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 115 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTI 312
+QQRLIFAGKQLEDGRTLSDYNIQK+STLHLVLRLRGG I
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLVLRLRGGDI 838
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 188
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +1
Query: 196 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
QQRLIFAGKQ+ D +T +DY + S LHLVL LRGG
Sbjct: 40 QQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76
Score = 52.4 bits (120), Expect = 4e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 191
M I VKTLTGK I L++E +D +E +K K+++KEGIPP
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPP 38
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 48.0 bits (109), Expect = 9e-06
Identities = 18/39 (46%), Positives = 30/39 (76%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
+ + VKTL GKTI + ++ +DT+E +K K+Q+K G+PP+
Sbjct: 161 LTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPD 199
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 193 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 300
+QQRLIF QLE+ R L YNI+ E +HLV R R
Sbjct: 199 DQQRLIFGRAQLENDRALFAYNIRDEDIIHLVSRHR 234
Score = 37.5 bits (83), Expect = 0.013
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 69 SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 185
S TM + VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 56 SKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 99 LTGKTITLEVEASDTIENVKAKIQDKEGIPPEPTTSHLCRE 221
+TG IT VEASD I+++ K+ + + P +P+ LC++
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLCKD 136
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 229 EDGRTLSDYNIQKESTLHL 285
+D RT+SDYNI+ STL L
Sbjct: 135 KDQRTISDYNIKNGSTLRL 153
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 37.9 bits (84), Expect = 0.010
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 190 QNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 294
Q+ L F+GK+LED ++ DYNIQK ST+ + R
Sbjct: 190 QHSYWLSFSGKRLEDHCSIGDYNIQKSSTITMYFR 224
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 36.7 bits (81), Expect = 0.022
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +3
Query: 84 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
+FVKTL +T+ LEV A++ + ++K KI+ EGIP E
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAE 37
Score = 34.7 bits (76), Expect = 0.089
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +1
Query: 196 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QRL +AG+QLED SD I E+T+++ L L GG
Sbjct: 38 EQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 36.7 bits (81), Expect = 0.022
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +3
Query: 84 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
+FVKTL +T+ LEV A++ + ++K KI+ EGIP E
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAE 37
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 36.7 bits (81), Expect = 0.022
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +3
Query: 84 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 194
+FVKTL +T+ LEV A++ + ++K KI+ EGIP E
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAE 37
Score = 34.7 bits (76), Expect = 0.089
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +1
Query: 196 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 306
+QRL +AG+QLED SD I E+T+++ L L GG
Sbjct: 38 EQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 34.7 bits (76), Expect = 0.089
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 191
++I+V+ G+T TL+ ASDT+ +VKAKI +K I P
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILP 139
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 185
M + +KT TGK IT+E S VK +++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 202 RLIFAGKQLEDGRTLSDYNIQKESTLHL 285
R++ K LED TL+ YNIQ+ STL L
Sbjct: 214 RMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3
Query: 81 QIFVKTLTGKTITLEVEASDTIENVKAKI 167
Q FV+ L GKT TL V ASDT+E K ++
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQL 71
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 364 CRKCYARLHPRATNCRKTKCGHT 432
CR CY H + R +CGHT
Sbjct: 63 CRVCYDEYHSSSNQARVLQCGHT 85
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 202 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 300
R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 237 RMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>AC024805-10|AAK39342.3| 1058|Caenorhabditis elegans Hypothetical
protein Y51H7C.11 protein.
Length = 1058
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 42 FXAKHVFHRSNTMQIFVKTLTGKTITLEVEASDTIEN-VKAKIQDKEGIPPEPTTSHLCR 218
F H F S T+Q+F K L K ++ IE V A I K +PP+ T S CR
Sbjct: 769 FSTSHKFFGS-TVQLFKKWLGSKFLSGHHLNDHIIELLVVAAIGKKGQVPPQSTWSSFCR 827
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 78 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 185
M + +KT TGKTIT+E S VK +++ K+G+
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGV 31
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,758,979
Number of Sequences: 27780
Number of extensions: 301627
Number of successful extensions: 759
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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