Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_N22
         (870 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L18983-1|AAA90974.1|  979|Homo sapiens tyrosine phosphatase prot...    31   7.2  
BC070053-1|AAH70053.1|  950|Homo sapiens PTPRN protein protein.        31   7.2  
AC114803-2|AAY24038.1|  979|Homo sapiens unknown protein.              31   7.2  
AB209368-1|BAD92605.1|  824|Homo sapiens protein tyrosine phosph...    31   7.2  

>L18983-1|AAA90974.1|  979|Homo sapiens tyrosine phosphatase
           protein.
          Length = 979

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
 Frame = +2

Query: 611 RLRPPDEHHKNRRSSQRWR-NPTGL*RYQAFPPGKLPSXRSXVPDP---CRXTGYLSAFS 778
           RLRPP+   ++R      R  P G    Q  P G  P+ +  +P P       G  S+ S
Sbjct: 115 RLRPPEPRPRDRSGLAPKRPGPAGELLLQDIPTGSAPAAQHRLPQPPVGKGGAGASSSLS 174

Query: 779 PLRESVAP 802
           PL+  + P
Sbjct: 175 PLQAELLP 182


>BC070053-1|AAH70053.1|  950|Homo sapiens PTPRN protein protein.
          Length = 950

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
 Frame = +2

Query: 611 RLRPPDEHHKNRRSSQRWR-NPTGL*RYQAFPPGKLPSXRSXVPDP---CRXTGYLSAFS 778
           RLRPP+   ++R      R  P G    Q  P G  P+ +  +P P       G  S+ S
Sbjct: 115 RLRPPEPRPRDRSGLAPKRPGPAGELLLQDIPTGSAPAAQHRLPQPPVGKGGAGASSSLS 174

Query: 779 PLRESVAP 802
           PL+  + P
Sbjct: 175 PLQAELLP 182


>AC114803-2|AAY24038.1|  979|Homo sapiens unknown protein.
          Length = 979

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
 Frame = +2

Query: 611 RLRPPDEHHKNRRSSQRWR-NPTGL*RYQAFPPGKLPSXRSXVPDP---CRXTGYLSAFS 778
           RLRPP+   ++R      R  P G    Q  P G  P+ +  +P P       G  S+ S
Sbjct: 115 RLRPPEPRPRDRSGLAPKRPGPAGELLLQDIPTGSAPAAQHRLPQPPVGKGGAGASSSLS 174

Query: 779 PLRESVAP 802
           PL+  + P
Sbjct: 175 PLQAELLP 182


>AB209368-1|BAD92605.1|  824|Homo sapiens protein tyrosine
           phosphatase, receptor type, N precursor variant protein.
          Length = 824

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
 Frame = +2

Query: 611 RLRPPDEHHKNRRSSQRWR-NPTGL*RYQAFPPGKLPSXRSXVPDP---CRXTGYLSAFS 778
           RLRPP+   ++R      R  P G    Q  P G  P+ +  +P P       G  S+ S
Sbjct: 87  RLRPPEPRPRDRSGLAPKRPGPAGELLLQDIPTGSAPAAQHRLPQPPVGKGGAGASSSLS 146

Query: 779 PLRESVAP 802
           PL+  + P
Sbjct: 147 PLQAELLP 154


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,835,919
Number of Sequences: 237096
Number of extensions: 1649566
Number of successful extensions: 2767
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2762
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)