Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_N18
(906 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L40395-1|AAC42002.1| 346|Homo sapiens protein ( Homo sapiens (c... 81 5e-15
BC011750-1|AAH11750.1| 351|Homo sapiens eukaryotic translation ... 81 5e-15
BC003165-1|AAH03165.1| 351|Homo sapiens eukaryotic translation ... 81 5e-15
BC000494-1|AAH00494.1| 351|Homo sapiens eukaryotic translation ... 81 5e-15
AF035280-1|AAB88176.1| 351|Homo sapiens protein ( Homo sapiens ... 81 5e-15
AC006530-5|AAD30183.1| 351|Homo sapiens EIF-2B protein. 81 5e-15
BC016967-1|AAH16967.2| 545|Homo sapiens RNA pseudouridylate syn... 33 1.4
BC007697-1|AAH07697.1| 554|Homo sapiens RPUSD2 protein protein. 33 1.4
AK055971-1|BAB71059.1| 545|Homo sapiens protein ( Homo sapiens ... 33 1.4
X16660-1|CAA34646.1| 223|Homo sapiens p25 protein protein. 31 4.3
X99897-1|CAA68172.1| 2262|Homo sapiens calcium channel alpha1 su... 31 7.6
U79666-1|AAB64179.1| 2505|Homo sapiens alpha1A-voltage-dependent... 31 7.6
AF004884-1|AAB61613.1| 2510|Homo sapiens neuronal calcium channe... 31 7.6
AF004883-1|AAB61612.1| 2266|Homo sapiens neuronal calcium channe... 31 7.6
AB035726-1|BAA94765.1| 2472|Homo sapiens alpha1A-voltage-depende... 31 7.6
>L40395-1|AAC42002.1| 346|Homo sapiens protein ( Homo sapiens
(clone S20iii15) mRNA, 3' end of cds. ).
Length = 346
Score = 81.0 bits (191), Expect = 5e-15
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = +2
Query: 479 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCK 655
L+ I + I EL ELE +I +QA EH+ ++EV++T G S VE FL+ + R
Sbjct: 123 LQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFH 182
Query: 656 VVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNK 784
V+VAE + H MA LS +G+ TV+ + +FAVMSRVNK
Sbjct: 183 VIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNK 225
Score = 37.9 bits (84), Expect = 0.050
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +1
Query: 202 TLTLVEKIISESN-ATARELCGVLRAAARRISSSLPLELVAINMIRRVLRAIR 357
TL L+ +II++ A EL ++R RR++++ P E NM+RRVL+ IR
Sbjct: 32 TLGLLRQIITDHRWRNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLKIIR 84
>BC011750-1|AAH11750.1| 351|Homo sapiens eukaryotic translation
initiation factor 2B, subunit 2 beta, 39kDa protein.
Length = 351
Score = 81.0 bits (191), Expect = 5e-15
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = +2
Query: 479 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCK 655
L+ I + I EL ELE +I +QA EH+ ++EV++T G S VE FL+ + R
Sbjct: 129 LQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFH 188
Query: 656 VVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNK 784
V+VAE + H MA LS +G+ TV+ + +FAVMSRVNK
Sbjct: 189 VIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNK 231
Score = 44.8 bits (101), Expect = 4e-04
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 181 SEQIAEATLTLVEKIISESN-ATARELCGVLRAAARRISSSLPLELVAINMIRRVLRAIR 357
SE++A TL L+ +II++ + A EL ++R RR++++ P E NM+RRVL+ IR
Sbjct: 31 SEEMARETLGLLRQIITDHRWSNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLKIIR 90
>BC003165-1|AAH03165.1| 351|Homo sapiens eukaryotic translation
initiation factor 2B, subunit 2 beta, 39kDa protein.
Length = 351
Score = 81.0 bits (191), Expect = 5e-15
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = +2
Query: 479 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCK 655
L+ I + I EL ELE +I +QA EH+ ++EV++T G S VE FL+ + R
Sbjct: 129 LQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFH 188
Query: 656 VVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNK 784
V+VAE + H MA LS +G+ TV+ + +FAVMSRVNK
Sbjct: 189 VIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNK 231
Score = 44.8 bits (101), Expect = 4e-04
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 181 SEQIAEATLTLVEKIISESN-ATARELCGVLRAAARRISSSLPLELVAINMIRRVLRAIR 357
SE++A TL L+ +II++ + A EL ++R RR++++ P E NM+RRVL+ IR
Sbjct: 31 SEEMARETLGLLRQIITDHRWSNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLKIIR 90
>BC000494-1|AAH00494.1| 351|Homo sapiens eukaryotic translation
initiation factor 2B, subunit 2 beta, 39kDa protein.
Length = 351
Score = 81.0 bits (191), Expect = 5e-15
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = +2
Query: 479 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCK 655
L+ I + I EL ELE +I +QA EH+ ++EV++T G S VE FL+ + R
Sbjct: 129 LQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFH 188
Query: 656 VVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNK 784
V+VAE + H MA LS +G+ TV+ + +FAVMSRVNK
Sbjct: 189 VIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNK 231
Score = 44.8 bits (101), Expect = 4e-04
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 181 SEQIAEATLTLVEKIISESN-ATARELCGVLRAAARRISSSLPLELVAINMIRRVLRAIR 357
SE++A TL L+ +II++ + A EL ++R RR++++ P E NM+RRVL+ IR
Sbjct: 31 SEEMARETLGLLRQIITDHRWSNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLKIIR 90
>AF035280-1|AAB88176.1| 351|Homo sapiens protein ( Homo sapiens
clone 23689 mRNA, complete cds. ).
Length = 351
Score = 81.0 bits (191), Expect = 5e-15
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = +2
Query: 479 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCK 655
L+ I + I EL ELE +I +QA EH+ ++EV++T G S VE FL+ + R
Sbjct: 129 LQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFH 188
Query: 656 VVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNK 784
V+VAE + H MA LS +G+ TV+ + +FAVMSRVNK
Sbjct: 189 VIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNK 231
Score = 44.8 bits (101), Expect = 4e-04
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 181 SEQIAEATLTLVEKIISESN-ATARELCGVLRAAARRISSSLPLELVAINMIRRVLRAIR 357
SE++A TL L+ +II++ + A EL ++R RR++++ P E NM+RRVL+ IR
Sbjct: 31 SEEMARETLGLLRQIITDHRWSNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLKIIR 90
>AC006530-5|AAD30183.1| 351|Homo sapiens EIF-2B protein.
Length = 351
Score = 81.0 bits (191), Expect = 5e-15
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = +2
Query: 479 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCK 655
L+ I + I EL ELE +I +QA EH+ ++EV++T G S VE FL+ + R
Sbjct: 129 LQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFH 188
Query: 656 VVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNK 784
V+VAE + H MA LS +G+ TV+ + +FAVMSRVNK
Sbjct: 189 VIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNK 231
Score = 44.8 bits (101), Expect = 4e-04
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 181 SEQIAEATLTLVEKIISESN-ATARELCGVLRAAARRISSSLPLELVAINMIRRVLRAIR 357
SE++A TL L+ +II++ + A EL ++R RR++++ P E NM+RRVL+ IR
Sbjct: 31 SEEMARETLGLLRQIITDHRWSNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLKIIR 90
>BC016967-1|AAH16967.2| 545|Homo sapiens RNA pseudouridylate
synthase domain containing 2 protein.
Length = 545
Score = 33.1 bits (72), Expect = 1.4
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = +1
Query: 406 RRES-PRSGSGDSGPAQHRAFNGSGLEGTYKRSHRRAPNRAGDNEVVHNESGPXXXXXXX 582
RR S R+ SGD GP G EG + SH++ + GD +V + P
Sbjct: 20 RRPSFTRTWSGDKGPMAETVSTQVGTEGGLRASHQQNGDAGGDAKVELSPGPPKPAGREV 79
Query: 583 XXTHVRGQRSGRAVP 627
V G+ A P
Sbjct: 80 EPAPVGGEHPSAAAP 94
>BC007697-1|AAH07697.1| 554|Homo sapiens RPUSD2 protein protein.
Length = 554
Score = 33.1 bits (72), Expect = 1.4
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = +1
Query: 406 RRES-PRSGSGDSGPAQHRAFNGSGLEGTYKRSHRRAPNRAGDNEVVHNESGPXXXXXXX 582
RR S R+ SGD GP G EG + SH++ + GD +V + P
Sbjct: 29 RRPSFTRTWSGDKGPMAETVSTQVGTEGGLRASHQQNGDAGGDAKVELSPGPPKPAGREV 88
Query: 583 XXTHVRGQRSGRAVP 627
V G+ A P
Sbjct: 89 EPAPVGGEHPSAAAP 103
>AK055971-1|BAB71059.1| 545|Homo sapiens protein ( Homo sapiens
cDNA FLJ31409 fis, clone NT2NE2000174. ).
Length = 545
Score = 33.1 bits (72), Expect = 1.4
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = +1
Query: 406 RRES-PRSGSGDSGPAQHRAFNGSGLEGTYKRSHRRAPNRAGDNEVVHNESGPXXXXXXX 582
RR S R+ SGD GP G EG + SH++ + GD +V + P
Sbjct: 20 RRPSFTRTWSGDKGPMAETVSTQVGTEGGLRASHQQNGDAGGDAKVELSPGPPKPAGREV 79
Query: 583 XXTHVRGQRSGRAVP 627
V G+ A P
Sbjct: 80 EPAPVGGEHPSAAAP 94
>X16660-1|CAA34646.1| 223|Homo sapiens p25 protein protein.
Length = 223
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 543 P*RVRPASTCGRTRCYSRSGPALWS-SGS*GRPRIGTARSSSRKGLTSARVTPWR 704
P +RPA+T R R ++ GPA + + + G G R+S+R G T A WR
Sbjct: 149 PSTLRPAATARRKRRWATRGPAHPAFARAHGEAGAGRVRTSARAGSTCAGWALWR 203
>X99897-1|CAA68172.1| 2262|Homo sapiens calcium channel alpha1 subunit
protein.
Length = 2262
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 406 RRESPRSGSGDSGPAQHRAFNGSGLEGTYKRSHRRAPNRAG 528
R SPR+G+ D +HRA G EG ++ RRA +R G
Sbjct: 944 RSGSPRTGA-DGEHRRHRAHRRPGEEGPEDKAERRARHREG 983
>U79666-1|AAB64179.1| 2505|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 2505
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 406 RRESPRSGSGDSGPAQHRAFNGSGLEGTYKRSHRRAPNRAG 528
R SPR+G+ D +HRA G EG ++ RRA +R G
Sbjct: 944 RSGSPRTGA-DGEHRRHRAHRRPGEEGPEDKAERRARHREG 983
>AF004884-1|AAB61613.1| 2510|Homo sapiens neuronal calcium channel
alpha 1A subunit isoform A-1 protein.
Length = 2510
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 406 RRESPRSGSGDSGPAQHRAFNGSGLEGTYKRSHRRAPNRAG 528
R SPR+G+ D +HRA G EG ++ RRA +R G
Sbjct: 947 RSGSPRTGA-DGEHRRHRAHRRPGEEGPEDKAERRARHREG 986
>AF004883-1|AAB61612.1| 2266|Homo sapiens neuronal calcium channel
alpha 1A subunit isoform 1A-2 protein.
Length = 2266
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 406 RRESPRSGSGDSGPAQHRAFNGSGLEGTYKRSHRRAPNRAG 528
R SPR+G+ D +HRA G EG ++ RRA +R G
Sbjct: 947 RSGSPRTGA-DGEHRRHRAHRRPGEEGPEDKAERRARHREG 986
>AB035726-1|BAA94765.1| 2472|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 2472
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 406 RRESPRSGSGDSGPAQHRAFNGSGLEGTYKRSHRRAPNRAG 528
R SPR+G+ D +HRA G EG ++ RRA +R G
Sbjct: 944 RSGSPRTGA-DGEHRRHRAHRRPGEEGPEDKAERRARHREG 983
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,396,107
Number of Sequences: 237096
Number of extensions: 2407058
Number of successful extensions: 6757
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6751
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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