Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_N13
         (866 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0913 + 12344096-12344125,12344284-12345970,12346243-123465...    31   1.2  
01_01_1209 - 9738501-9738516,9738703-9739161,9739389-9739608,973...    31   1.2  
06_03_0095 - 16575938-16576585,16577028-16577219,16577294-165773...    30   2.8  
05_01_0003 + 29476-29847,30192-31519,31612-31722,31836-32112,322...    28   8.4  

>03_02_0913 + 12344096-12344125,12344284-12345970,12346243-12346573,
            12346712-12347567,12347760-12347883,12348469-12348688,
            12348771-12349229,12349318-12349519
          Length = 1302

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 12/43 (27%), Positives = 26/43 (60%)
 Frame = -3

Query: 300  LIFHNHYHYQKHAILFCVSFQKNSPWLVFLFLTLTSISIFSTL 172
            L+ H H++YQ+ A +   +F +N+ +++ LF  +   +  +TL
Sbjct: 1052 LLVHGHWNYQRIAYMILYNFYRNAVFVLMLFWYILHTAYSATL 1094


>01_01_1209 - 9738501-9738516,9738703-9739161,9739389-9739608,
            9739708-9739831,9739927-9740635,9741826-9742132,
            9742213-9743704
          Length = 1108

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 12/37 (32%), Positives = 25/37 (67%)
 Frame = -3

Query: 318  FHLPMNLIFHNHYHYQKHAILFCVSFQKNSPWLVFLF 208
            F +P+ L+ H H++YQ+ + +   +F KN+ +++ LF
Sbjct: 915  FLVPL-LLVHGHWNYQRMSYMILYNFYKNATFVLVLF 950


>06_03_0095 - 16575938-16576585,16577028-16577219,16577294-16577392,
            16577496-16577618,16577717-16577929,16578143-16578251,
            16578339-16578427,16578604-16578880,16578974-16579084,
            16579160-16580508,16581218-16581631
          Length = 1207

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -3

Query: 300  LIFHNHYHYQKHAILFCVSFQKNSPWLVFLFL 205
            L+ H H+ Y++ +++ C  F KN  + V +FL
Sbjct: 914  LLIHGHWCYRRISVMICYFFYKNVTFGVTIFL 945


>05_01_0003 +
           29476-29847,30192-31519,31612-31722,31836-32112,
           32233-33714
          Length = 1189

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 300 LIFHNHYHYQKHAILFCVSFQKNSPWLVFLFL 205
           L+ H H+ Y + + + C  F KN  + V LFL
Sbjct: 893 LLVHGHWCYSRISAMICYFFYKNITFGVTLFL 924


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,746,126
Number of Sequences: 37544
Number of extensions: 277128
Number of successful extensions: 578
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)