Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_N10
         (854 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1046 - 23919990-23920183,23920251-23920479,23920624-239210...    33   0.22 
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967...    30   2.7  
12_02_0797 - 23230441-23230757,23230922-23231069,23231352-232325...    29   6.2  
01_01_0176 + 1507592-1507678,1507803-1507931,1508076-1508252,150...    28   8.3  

>08_02_1046 -
           23919990-23920183,23920251-23920479,23920624-23921057,
           23921426-23921567,23922163-23922255,23923132-23923245,
           23924181-23924266,23924458-23924506,23924717-23924783,
           23925550-23925665,23925698-23925821,23926465-23926553,
           23926810-23927061
          Length = 662

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
 Frame = -1

Query: 836 IIFFNT*IFVVNSLVTYFAKNMFWKIQNHEAIRSASFNIIYE*VYLQKTDKNKTKINY-Y 660
           ++FF   + V+ S+V++FA N+ + ++ H   RSA  N      Y+ K+ +   ++N   
Sbjct: 450 VLFFRD-LTVIKSIVSFFAINISFPLEGHLVTRSADPNNARRIYYVSKSVQEILQLNVEV 508

Query: 659 GHHVLLSSLQIHNF 618
           G  + ++SL +  F
Sbjct: 509 GEQLKIASLGLKMF 522


>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
            16196822-16197001,16197090-16197371,16197471-16199141,
            16199257-16199463,16199566-16199700,16199792-16200082,
            16200403-16200621,16200876-16201034,16201120-16201181,
            16201257-16201383,16201460-16201693,16201777-16202003,
            16202163-16202257,16202341-16202468,16202574-16202594,
            16202765-16202921,16203007-16203075,16203228-16203341,
            16203415-16203491,16203576-16203688,16204432-16204507,
            16204592-16204756,16204825-16204952,16205049-16205130,
            16205426-16205548,16205633-16205860,16205933-16206034,
            16206144-16206341,16206581-16206760,16206868-16207020,
            16207690-16207797,16208201-16208355,16208786-16208912,
            16209825-16209914,16209986-16210127,16210303-16210379,
            16210467-16210582,16210638-16210773,16211130-16211198,
            16211279-16211361,16211655-16211720,16211788-16211974,
            16212054-16213547,16213635-16214165,16214234-16214363,
            16214407-16215878,16216359-16216364,16216750-16217055,
            16217364-16217468,16217577-16217772,16217862-16217929,
            16218853-16220631,16221026-16221151,16221604-16221780,
            16221997-16222128,16223461-16223498,16223710-16223788,
            16224175-16224284,16224787-16224935,16225027-16225197,
            16225281-16225552,16226355-16226442,16227942-16228369
          Length = 5157

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = -1

Query: 557  F*NFWQLLKKQMEDWSWHSLLKYTKQLFS---LSTNSHSLPEMFDSSFKITCSQQL 399
            F N+  +LKK+ +   WHS+L+  +++ +   +   +H +P +      +TCS  L
Sbjct: 2448 FENYGNILKKESDHPIWHSILECYREIVAYHKIDVVAHPIPLLSMRLLDMTCSVTL 2503


>12_02_0797 -
           23230441-23230757,23230922-23231069,23231352-23232562,
           23232639-23232894,23234073-23234309
          Length = 722

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 20/64 (31%), Positives = 28/64 (43%)
 Frame = +3

Query: 318 TLGGPVPDMNDHEAMQRFFLQQIQXXXXXXXXXXXXXXVEHLGQAVAVCGQTEQLLSVLQ 497
           T G  VP  N  EA+    L  I               +EHL  A+++CGQT  L   L+
Sbjct: 264 TEGSYVPKNNLEEAI--LLLMIILKKWYLGKTHWDPSVMEHLTFALSLCGQTSVLAKHLE 321

Query: 498 QTMP 509
           + +P
Sbjct: 322 EVLP 325


>01_01_0176 +
           1507592-1507678,1507803-1507931,1508076-1508252,
           1508630-1508770,1509045-1509233,1509311-1509382,
           1509483-1509537,1509987-1510015,1510182-1510396,
           1510987-1511151,1511262-1511646
          Length = 547

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 560 PPILDEGEEQRNAGRRCRIKNCVFEEMKVKHGGHNN 667
           PP L + E +R   RR R+++   +E   KH GHN+
Sbjct: 452 PPSLHDDEHRR---RRRRLRSEAHDERGAKHPGHNS 484


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,825,960
Number of Sequences: 37544
Number of extensions: 399882
Number of successful extensions: 972
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)