Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_N08
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 337 7e-93
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 337 7e-93
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 337 7e-93
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 335 3e-92
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 311 4e-85
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 311 4e-85
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 310 9e-85
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 308 4e-84
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 306 1e-83
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 305 2e-83
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 305 2e-83
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 304 4e-83
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 286 1e-77
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 283 9e-77
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 266 1e-71
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 239 1e-63
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 161 6e-40
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 160 1e-39
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 159 3e-39
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 157 1e-38
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 157 1e-38
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 156 2e-38
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 140 2e-33
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 140 2e-33
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 87 2e-17
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 87 2e-17
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.62
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 4.4
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 4.4
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 4.4
AL110485-19|CAB60367.2| 529|Caenorhabditis elegans Hypothetical... 28 7.6
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 7.6
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 337 bits (828), Expect = 7e-93
Identities = 151/184 (82%), Positives = 166/184 (90%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 717 VVEP 728
VVEP
Sbjct: 181 VVEP 184
Score = 54.8 bits (126), Expect = 8e-08
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIER 841
HSDC+FMVDNEAIYDICRR LDIER
Sbjct: 197 HSDCSFMVDNEAIYDICRRNLDIER 221
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 337 bits (828), Expect = 7e-93
Identities = 151/184 (82%), Positives = 166/184 (90%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 717 VVEP 728
VVEP
Sbjct: 181 VVEP 184
Score = 54.8 bits (126), Expect = 8e-08
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIER 841
HSDC+FMVDNEAIYDICRR LDIER
Sbjct: 197 HSDCSFMVDNEAIYDICRRNLDIER 221
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 337 bits (828), Expect = 7e-93
Identities = 151/184 (82%), Positives = 166/184 (90%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 717 VVEP 728
VVEP
Sbjct: 181 VVEP 184
Score = 54.8 bits (126), Expect = 8e-08
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIER 841
HSDC+FMVDNEAIYDICRR LDIER
Sbjct: 197 HSDCSFMVDNEAIYDICRRNLDIER 221
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 335 bits (823), Expect = 3e-92
Identities = 150/183 (81%), Positives = 165/183 (90%)
Frame = +3
Query: 180 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 359
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 360 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 539
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 540 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 719
IR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTAV
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAV 180
Query: 720 VEP 728
VEP
Sbjct: 181 VEP 183
Score = 54.8 bits (126), Expect = 8e-08
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIER 841
HSDC+FMVDNEAIYDICRR LDIER
Sbjct: 196 HSDCSFMVDNEAIYDICRRNLDIER 220
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 311 bits (764), Expect = 4e-85
Identities = 141/184 (76%), Positives = 160/184 (86%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 717 VVEP 728
VVEP
Sbjct: 179 VVEP 182
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIER 841
HSDCAFMVDNEAIYDICRR LD+ER
Sbjct: 195 HSDCAFMVDNEAIYDICRRNLDVER 219
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 311 bits (764), Expect = 4e-85
Identities = 141/184 (76%), Positives = 160/184 (86%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 717 VVEP 728
VVEP
Sbjct: 179 VVEP 182
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIER 841
HSDCAFMVDNEAIYDICRR LD+ER
Sbjct: 195 HSDCAFMVDNEAIYDICRRNLDVER 219
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 310 bits (761), Expect = 9e-85
Identities = 140/184 (76%), Positives = 160/184 (86%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 717 VVEP 728
VVEP
Sbjct: 179 VVEP 182
Score = 52.0 bits (119), Expect = 5e-07
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIER 841
HSDCAFMVDNEAIYDICRR L ++R
Sbjct: 195 HSDCAFMVDNEAIYDICRRNLSVDR 219
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 308 bits (756), Expect = 4e-84
Identities = 139/184 (75%), Positives = 159/184 (86%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQV TA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTA 178
Query: 717 VVEP 728
VVEP
Sbjct: 179 VVEP 182
Score = 52.0 bits (119), Expect = 5e-07
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIER 841
HSDCAFMVDNEAIYDICRR L ++R
Sbjct: 195 HSDCAFMVDNEAIYDICRRNLSVDR 219
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 306 bits (751), Expect = 1e-83
Identities = 136/185 (73%), Positives = 157/185 (84%)
Frame = +3
Query: 174 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 353
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 354 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 533
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 534 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 713
DR+R+L + C GLQGFL+FH LLMERLSVDYGKKSKLEF IYPAPQVST
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVST 184
Query: 714 AVVEP 728
++VEP
Sbjct: 185 SMVEP 189
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIERXPTPT 856
HSDC+FMVDNEAIYDICRR LD+ R PT T
Sbjct: 202 HSDCSFMVDNEAIYDICRRNLDLAR-PTYT 230
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 305 bits (749), Expect = 2e-83
Identities = 138/184 (75%), Positives = 158/184 (85%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 717 VVEP 728
VVEP
Sbjct: 179 VVEP 182
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIER 841
HSDCAFMVDNEAIYDIC+R LD++R
Sbjct: 195 HSDCAFMVDNEAIYDICKRNLDVDR 219
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 305 bits (749), Expect = 2e-83
Identities = 138/184 (75%), Positives = 158/184 (85%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 717 VVEP 728
VVEP
Sbjct: 179 VVEP 182
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIER 841
HSDCAFMVDNEAIYDIC+R LD++R
Sbjct: 195 HSDCAFMVDNEAIYDICKRNLDVDR 219
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 304 bits (747), Expect = 4e-83
Identities = 133/184 (72%), Positives = 158/184 (85%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
R+R+L ++C LQGFLIFH L+MERLS+DYGKK+KLEF+IYPAPQ+ST+
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTS 180
Query: 717 VVEP 728
+VEP
Sbjct: 181 MVEP 184
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIERXPTPT 856
HSDC+F++DNEAIY+I + L + R PT T
Sbjct: 197 HSDCSFIMDNEAIYEITKVNLGV-RSPTYT 225
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 286 bits (702), Expect = 1e-77
Identities = 129/184 (70%), Positives = 149/184 (80%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
RIR+LA+ C GLQGF +FH +LMERLS +YGKKSKLEF+IYPAPQ+ST+
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTS 177
Query: 717 VVEP 728
VVEP
Sbjct: 178 VVEP 181
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIERXPT 850
HSDC+FMVDNEAIYDICRR L + R PT
Sbjct: 194 HSDCSFMVDNEAIYDICRRNLRVSR-PT 220
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 283 bits (695), Expect = 9e-77
Identities = 128/183 (69%), Positives = 149/183 (81%)
Frame = +3
Query: 180 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 359
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 360 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 539
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 540 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 719
+++LA+ C GLQGF+IFH LLMERLS +YGKK KLEFAIYPAPQVST++
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSM 187
Query: 720 VEP 728
VEP
Sbjct: 188 VEP 190
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/30 (80%), Positives = 25/30 (83%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIERXPTPT 856
HSDC FMVDNEAIYDICRR LD+ R PT T
Sbjct: 203 HSDCTFMVDNEAIYDICRRNLDLAR-PTYT 231
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 266 bits (652), Expect = 1e-71
Identities = 118/183 (64%), Positives = 143/183 (78%)
Frame = +3
Query: 180 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 359
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 360 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 539
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 540 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 719
IRK + C GLQGFL+FH LLMERLSV++GKKSKLEF++YPAPQVST+V
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSV 184
Query: 720 VEP 728
VEP
Sbjct: 185 VEP 187
Score = 46.0 bits (104), Expect = 4e-05
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +2
Query: 770 SDCAFMVDNEAIYDICRRYLDIER 841
SDC+FMVDNEAIYD+CR+ L +ER
Sbjct: 201 SDCSFMVDNEAIYDLCRQKLHVER 224
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 239 bits (586), Expect = 1e-63
Identities = 108/162 (66%), Positives = 129/162 (79%)
Frame = +3
Query: 243 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 422
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 423 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXX 602
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 603 XXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 728
LLMERLS +YGKK KLEFAIYPAPQVST++VEP
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEP 162
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/30 (80%), Positives = 25/30 (83%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIERXPTPT 856
HSDC FMVDNEAIYDICRR LD+ R PT T
Sbjct: 175 HSDCTFMVDNEAIYDICRRNLDLAR-PTYT 203
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 161 bits (391), Expect = 6e-40
Identities = 79/184 (42%), Positives = 109/184 (59%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
+RK A+ C LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 717 VVEP 728
VVEP
Sbjct: 179 VVEP 182
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIERXPT 850
++D F +DNEA+YDIC R L + PT
Sbjct: 195 NTDETFCIDNEALYDICFRTLKLSN-PT 221
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 160 bits (388), Expect = 1e-39
Identities = 79/184 (42%), Positives = 110/184 (59%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
IRK A+ C LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 717 VVEP 728
VVEP
Sbjct: 179 VVEP 182
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDI 835
++D + +DNEA+YDIC R L +
Sbjct: 195 NTDETYCIDNEALYDICYRTLKL 217
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 159 bits (385), Expect = 3e-39
Identities = 78/184 (42%), Positives = 110/184 (59%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
IRK A+ C LQGF + H LL+ ++ ++ + F++ P+P+VS
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDT 178
Query: 717 VVEP 728
VVEP
Sbjct: 179 VVEP 182
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDI 835
++D + +DNEA+YDIC R L +
Sbjct: 195 NTDETYCIDNEALYDICYRTLKL 217
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 157 bits (381), Expect = 1e-38
Identities = 77/184 (41%), Positives = 109/184 (59%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
+RK A+ LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 717 VVEP 728
VVEP
Sbjct: 179 VVEP 182
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIERXPTPT 856
++D F +DNEA+YDIC R L + TPT
Sbjct: 195 NTDSTFCIDNEALYDICFRTL---KLTTPT 221
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 157 bits (381), Expect = 1e-38
Identities = 77/184 (41%), Positives = 109/184 (59%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
+RK A+ LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 717 VVEP 728
VVEP
Sbjct: 179 VVEP 182
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIERXPTPT 856
++D F +DNEA+YDIC R L + TPT
Sbjct: 195 NTDSTFCIDNEALYDICFRTL---KLTTPT 221
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 156 bits (379), Expect = 2e-38
Identities = 76/184 (41%), Positives = 106/184 (57%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
+RK A+ C LQGF + H LL+ ++ +Y + + F++ P+P+VS
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDT 178
Query: 717 VVEP 728
VVEP
Sbjct: 179 VVEP 182
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 767 HSDCAFMVDNEAIYDICRRYLDIERXPTPT 856
++D F +DNEA+YDIC R L + TPT
Sbjct: 195 NTDETFCIDNEALYDICFRTL---KLTTPT 221
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 140 bits (338), Expect = 2e-33
Identities = 74/193 (38%), Positives = 105/193 (54%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
IR+ A+ L+GF + H LL+ +L +Y K+ +I P+ +VS
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 717 VVEPLQLYPHHPH 755
VVEP PH
Sbjct: 179 VVEPYNAILSMPH 191
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 782 FMVDNEAIYDICRRYLDIERXPT 850
F +DNEAI+DIC+ L +E T
Sbjct: 200 FCIDNEAIFDICQYNLKLENRVT 222
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 140 bits (338), Expect = 2e-33
Identities = 74/193 (38%), Positives = 105/193 (54%)
Frame = +3
Query: 177 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 356
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 357 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 536
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 537 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 716
IR+ A+ L+GF + H LL+ +L +Y K+ +I P+ +VS
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 717 VVEPLQLYPHHPH 755
VVEP PH
Sbjct: 179 VVEPYNAILSMPH 191
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 782 FMVDNEAIYDICRRYLDIERXPT 850
F +DNEAI+DIC+ L +E T
Sbjct: 200 FCIDNEAIFDICQYNLKLENRVT 222
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 87.0 bits (206), Expect = 2e-17
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 3/181 (1%)
Frame = +3
Query: 189 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 368
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 369 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 539
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 540 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 719
I + A+ L G L H LL+ERL + KK ++++ ST V
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 720 V 722
V
Sbjct: 184 V 184
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 87.0 bits (206), Expect = 2e-17
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 3/181 (1%)
Frame = +3
Query: 189 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 368
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 369 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 539
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 540 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 719
I + A+ L G L H LL+ERL + KK ++++ ST V
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 720 V 722
V
Sbjct: 184 V 184
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 205 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 360
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 219 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 398
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 399 VDE 407
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 219 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 398
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 399 VDE 407
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 219 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 398
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 399 VDE 407
DE
Sbjct: 116 ADE 118
>AL110485-19|CAB60367.2| 529|Caenorhabditis elegans Hypothetical
protein Y46G5A.24 protein.
Length = 529
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -2
Query: 710 GNLRRGVDGELQFRLLAVVNGETLHQ*GSEPRAGTSTEGVEDQESLQTGTLVSELADSVQ 531
GNL V +L+F + N E HQ EP + EG+E+ + G L+ + S +
Sbjct: 435 GNLAGVVKADLKFGNHLIWNRENPHQICGEPIFVPNPEGIEEDD----GILIVPIMSSSE 490
Query: 530 NQI 522
Q+
Sbjct: 491 KQV 493
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 467 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 372
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,829,653
Number of Sequences: 27780
Number of extensions: 402899
Number of successful extensions: 1002
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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