Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_N06
         (884 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.           31   4.2  
AF285605-1|AAK31984.1| 2789|Homo sapiens testis protein TEX15 pr...    31   5.6  
AF289023-1|AAG01854.1|  495|Homo sapiens formiminotransferase cy...    30   9.7  

>AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.
          Length = 326

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +1

Query: 637 LVRSPVPTLPLTGYLSAFLPSGSVALSHS 723
           + R PV T+P+   L AF   GSV LSHS
Sbjct: 161 IFRGPVATIPIVLLLKAFPYCGSVVLSHS 189


>AF285605-1|AAK31984.1| 2789|Homo sapiens testis protein TEX15
           protein.
          Length = 2789

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +3

Query: 573 SQRWRNPTGL*RYQAFPPGKLPRALSCSDPAAYXIPVRLS 692
           SQ W +  G   Y   PP K+  A  C D   +  P+ +S
Sbjct: 123 SQSWAHNMGSEDYDCIPPNKVTMAGQCKDQGNFSFPISVS 162


>AF289023-1|AAG01854.1|  495|Homo sapiens formiminotransferase
           cyclodeaminase form D protein.
          Length = 495

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 480 PAKGQEP*KGRVAGVFHRLRPPDEHHK 560
           P  GQ P  GRV  +F R   P+ HH+
Sbjct: 466 PGGGQSPGDGRVWRIFQRAHQPEGHHR 492


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,504,126
Number of Sequences: 237096
Number of extensions: 2497984
Number of successful extensions: 11257
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11257
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)