Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_N03
         (982 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    31   1.4  
11_06_0187 - 21029511-21029857,21031444-21031739,21032270-210323...    30   3.2  
11_06_0610 - 25449085-25453284                                         29   4.3  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   5.7  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           29   7.5  
09_06_0081 + 20745627-20748144,20748211-20748308                       28   9.9  
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373...    28   9.9  

>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
            1211452-1211878,1212091-1213219,1213623-1213746,
            1214207-1214278,1215480-1215578,1215617-1215640,
            1215704-1215745,1215815-1215895,1215983-1216114,
            1216115-1216196,1216271-1216365,1218499-1218570,
            1218676-1218792,1219379-1219447,1219521-1219587,
            1219886-1220025
          Length = 1269

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 27/106 (25%), Positives = 32/106 (30%), Gaps = 3/106 (2%)
 Frame = +3

Query: 669  PKRPRPPXXEASXKTXXPXQRXAKPAQXF*TPQGXSPXKXSPXPLHGVXNPAGFTRK--P 842
            P  P PP    + +T  P    A P      P   S    +P P      PA   ++  P
Sbjct: 689  PPPPPPPPLPPANRTNGPGVPSAPPPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPP 748

Query: 843  WAPXXPXFGETLXPXPXXPXXXGLSHPGXXXXPPK-EGXGGXKTXP 977
              P  P       P P  P       PG    PP   G  G    P
Sbjct: 749  APPPPPLMTGKKAPAPPPPPPQAPKPPGTVPPPPPLHGASGRPHPP 794


>11_06_0187 -
           21029511-21029857,21031444-21031739,21032270-21032345,
           21032714-21032836,21033200-21033228,21033823-21034328
          Length = 458

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 15/42 (35%), Positives = 15/42 (35%)
 Frame = +2

Query: 851 PXPXFRGNPXPLXLXPTPVGSLPPGXXXXPXQGRGWGSXNPP 976
           P P  R  P PL L P P   L P     P     W    PP
Sbjct: 37  PPPQLR-QPLPLPLPPFPARQLGPPVGLPPPTAERWAPMRPP 77


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +2

Query: 833  PETLGPPXPXFRGNPXPLXLXPTPVGSLPP 922
            P  L PP       P P+ L P PV SLPP
Sbjct: 1253 PVILSPPAVKSLPPPAPVSLPPPPVKSLPP 1282


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 28/103 (27%), Positives = 30/103 (29%)
 Frame = +3

Query: 669 PKRPRPPXXEASXKTXXPXQRXAKPAQXF*TPQGXSPXKXSPXPLHGVXNPAGFTRKPWA 848
           P RP+     A      P     KPA     P    P K +P P      P G    P A
Sbjct: 297 PSRPQSIAAAAVASPAPPPPPPPKPAAA--APPPPPPPKAAPPP----PPPKGPPPPPPA 350

Query: 849 PXXPXFGETLXPXPXXPXXXGLSHPGXXXXPPKEGXGGXKTXP 977
              P       P P  P   G    G    PPK G       P
Sbjct: 351 KGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAP 393


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 25/100 (25%), Positives = 28/100 (28%)
 Frame = +3

Query: 669 PKRPRPPXXEASXKTXXPXQRXAKPAQXF*TPQGXSPXKXSPXPLHGVXNPAGFTRKPWA 848
           P  P PP   A   T  P    A PA         +P    P P             P  
Sbjct: 304 PPHPLPPGAGAGAGTGAPPPPPAHPA---------APAPPPPAPSPSAAGAGSGPPPPPP 354

Query: 849 PXXPXFGETLXPXPXXPXXXGLSHPGXXXXPPKEGXGGXK 968
           P  P       P P  P   G +  G    PP    GG +
Sbjct: 355 PAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGGPR 394


>09_06_0081 + 20745627-20748144,20748211-20748308
          Length = 871

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/38 (34%), Positives = 14/38 (36%)
 Frame = +2

Query: 827 LYPETLGPPXPXFRGNPXPLXLXPTPVGSLPPGXXXXP 940
           L P    PP P F     P    P P   +PPG    P
Sbjct: 269 LAPPAPTPPAPTFHVPTPPTPATPAPPADVPPGFTVSP 306


>01_06_0823 +
           32234588-32234936,32236354-32237093,32237260-32237343,
           32237909-32239263,32240399-32240460,32240544-32241144,
           32241229-32241310,32241778-32241840
          Length = 1111

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 570 PRXRGDNAGKNXXXQXPTXGPXXXKXPRGLAXXP 671
           PR  G NAG     + P  GP   + P+G+   P
Sbjct: 845 PRVSGYNAGFTVPTERPIYGPSAPRAPQGILPCP 878


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,350,825
Number of Sequences: 37544
Number of extensions: 224804
Number of successful extensions: 423
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2858396560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)