Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_M22
(882 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 166 2e-41
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 166 2e-41
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 146 2e-35
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 146 2e-35
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 139 2e-33
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 126 3e-29
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 107 8e-24
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 105 4e-23
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 104 7e-23
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 99 5e-21
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 97 1e-20
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 97 1e-20
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 60 3e-09
U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory... 39 0.005
AC024751-4|AAK21505.1| 425|Caenorhabditis elegans Hypothetical ... 35 0.067
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 34 0.12
Z99281-3|CAB16508.1| 482|Caenorhabditis elegans Hypothetical pr... 34 0.15
U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defecti... 28 7.7
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 166 bits (403), Expect = 2e-41
Identities = 88/233 (37%), Positives = 129/233 (55%), Gaps = 13/233 (5%)
Frame = +2
Query: 221 GVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGEAVKMKVEEGVVKREDIFITTK 400
G +SK ++ + A+ GYRH D A VY+ ++E+GEA+K ++EG VKRE++FIT+K
Sbjct: 19 GTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGKVKREELFITSK 78
Query: 401 LWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHW-----------PIGLNADYSHSDVDF 547
+WNT H + + I+ L L L Y+DL L+HW P G N +SDVD+
Sbjct: 79 VWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFPAGENGKMRYSDVDY 138
Query: 548 METWRGLEDAQRMGIVKGIGLSNFNKQQLERVLKEGTIKPDAXQIEVHLQNVQKEMVEFC 727
+ETW+ E AQ+ G + IGLSNF Q++RV +KP Q+E+H Q ++ EFC
Sbjct: 139 LETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVELHPYFTQVKLREFC 198
Query: 728 QSEGVVVMGY-XLXGPG*PDMVRXSKGQXRRSSAXLHRXK-NXXXPPQIXLRW 880
+ +G+VV+GY L PG + + K + P QI LRW
Sbjct: 199 KEKGIVVVGYSPLGNPGSAFFRKDGDPNVLTNEVVAGIAKAHGKTPAQIILRW 251
Score = 31.5 bits (68), Expect = 0.83
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 142 VPSLKMNNGRDMPAIGLGTY 201
V SLK+N+G +PAIGLGT+
Sbjct: 2 VQSLKLNSGYSIPAIGLGTW 21
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 166 bits (403), Expect = 2e-41
Identities = 88/233 (37%), Positives = 129/233 (55%), Gaps = 13/233 (5%)
Frame = +2
Query: 221 GVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGEAVKMKVEEGVVKREDIFITTK 400
G +SK ++ + A+ GYRH D A VY+ ++E+GEA+K ++EG VKRE++FIT+K
Sbjct: 19 GTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGKVKREELFITSK 78
Query: 401 LWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHW-----------PIGLNADYSHSDVDF 547
+WNT H + + I+ L L L Y+DL L+HW P G N +SDVD+
Sbjct: 79 VWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFPAGENGKMRYSDVDY 138
Query: 548 METWRGLEDAQRMGIVKGIGLSNFNKQQLERVLKEGTIKPDAXQIEVHLQNVQKEMVEFC 727
+ETW+ E AQ+ G + IGLSNF Q++RV +KP Q+E+H Q ++ EFC
Sbjct: 139 LETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVELHPYFTQVKLREFC 198
Query: 728 QSEGVVVMGY-XLXGPG*PDMVRXSKGQXRRSSAXLHRXK-NXXXPPQIXLRW 880
+ +G+VV+GY L PG + + K + P QI LRW
Sbjct: 199 KEKGIVVVGYSPLGNPGSAFFRKDGDPNVLTNEVVAGIAKAHGKTPAQIILRW 251
Score = 31.5 bits (68), Expect = 0.83
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 142 VPSLKMNNGRDMPAIGLGTY 201
V SLK+N+G +PAIGLGT+
Sbjct: 2 VQSLKLNSGYSIPAIGLGTW 21
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 146 bits (354), Expect = 2e-35
Identities = 73/177 (41%), Positives = 106/177 (59%), Gaps = 2/177 (1%)
Frame = +2
Query: 251 RDVVMRAIDVGYRHFDTASVYETEQEIGEAVKMKVEEGVVKREDIFITTKLWNTQHRRTE 430
+ V+ A+ GYRH DTA++Y+ E +IG+A+ EG++KREDIFITTK + +
Sbjct: 32 KTVIRNAVLAGYRHIDTATLYQNEHQIGDALAELFAEGILKREDIFITTKAFCHEVAPDV 91
Query: 431 VAQAINDSLKKLGLDYIDLYLMHWPIGLNADYS-HSDVDFMETWRGLEDAQRMGIVKGIG 607
V +A+ +SLK+L LDY+DLYL H P D S SDV + WRG E +G+ K IG
Sbjct: 92 VEEALRNSLKRLRLDYVDLYLAHIPASTKDDGSFRSDVKVEDIWRGFEKVYGLGLTKAIG 151
Query: 608 LSNFNKQQLERVLKEGTIKPDAXQIEVHLQNVQKEMVEFCQSEGVVVMGYXLXG-PG 775
+SNFN+ Q+ R++ + A Q+E+HL QK E C+ +++ Y G PG
Sbjct: 152 VSNFNESQIVRIMNIQKVPIHASQLELHLYLPQKAHRELCKKHNILITAYATLGSPG 208
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 146 bits (353), Expect = 2e-35
Identities = 74/187 (39%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Frame = +2
Query: 221 GVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGEAVKMKVEEGVVKREDIFITTK 400
G +S ++ V A+ GYR DTASVY+ E+ IG A+K +EEGVVKRE++FITTK
Sbjct: 22 GTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKELLEEGVVKREELFITTK 81
Query: 401 LWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLNADYS-HSDVDFMETWRGLEDA 577
W + ++ + +SLKKL L+Y+DLYL H P N D S H + WR +
Sbjct: 82 AWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAV 141
Query: 578 QRMGIVKGIGLSNFNKQQLERVLKEGTIKPDAXQIEVHLQNVQKEMVEFCQSEGVVVMGY 757
+ G+ K +G+SN+N Q+ R L G Q+E+HL Q + V+FC+ + V Y
Sbjct: 142 YKAGLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQHDHVDFCKKHNISVTSY 201
Query: 758 XLXG-PG 775
G PG
Sbjct: 202 ATLGSPG 208
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 148 SLKMNNGRDMPAIGLGTY 201
S+K++NG +MP IGLGT+
Sbjct: 7 SIKLSNGVEMPVIGLGTW 24
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 139 bits (337), Expect = 2e-33
Identities = 68/189 (35%), Positives = 113/189 (59%), Gaps = 17/189 (8%)
Frame = +2
Query: 260 VMRAIDVGYRHFDTASVYETEQEIGEAVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQ 439
V A++ GYRH D+A ++ ++E+ +K + V+RE++F+++K+WNT H R Q
Sbjct: 34 VRDALEAGYRHIDSALSFKNQEEVAAGIKDWCKIRKVRREELFLSSKIWNTYHSRNRCMQ 93
Query: 440 AINDSLKKLGLDYIDLYLMHWPIG----------------LNADYSHSDVDFMETWRGLE 571
I++ L+ Y+DL ++HWP G N +SDVD++ETW+ LE
Sbjct: 94 QIDEMLEIFETTYMDLIVIHWPFGWAEDEPPGERGLWPRGANGKMRYSDVDYLETWKALE 153
Query: 572 DAQRMGIVKGIGLSNFNKQQLERVLKEGTIKPDAXQIEVHLQNVQKEMVEFCQSEGVVVM 751
DA R G ++ IGL+NFN Q+E+V +G IKP Q+E++ Q+E+ +FC+ +G+++
Sbjct: 154 DAHRSGKIRSIGLANFNIGQVEQVWTKGLIKPAVLQVEMNPFLDQEEIRQFCREKGIILT 213
Query: 752 GYXLXG-PG 775
+ L G PG
Sbjct: 214 AFMLTGNPG 222
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 126 bits (303), Expect = 3e-29
Identities = 71/199 (35%), Positives = 108/199 (54%), Gaps = 14/199 (7%)
Frame = +2
Query: 221 GVVKSKDKQLRDVVMRA-IDVGYRHFDTASVYETEQEIGEAVKMKVEEGVVKREDIFITT 397
G + KD+ V +RA +D GYR DTA +Y+ E IG+ + + G +KREDIF+T+
Sbjct: 20 GTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLHEYISSGKLKREDIFVTS 79
Query: 398 KLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGL------------NADYSHSDV 541
KL T H +V + + LK L L+YIDLYL+H P N + + +++
Sbjct: 80 KLPFTAHAPEDVPKCVESQLKALQLEYIDLYLIHCPFPFKHQEGSFAPLMENGELAVTEI 139
Query: 542 DFMETWRGLEDAQRMGIVKGIGLSNFNKQQLERVLKEGTIKPDAXQIEVHLQNVQKEMVE 721
++TWR LE + G +K +G+SNF+ QL+ + +KP Q+E H+ Q+E+
Sbjct: 140 AHIDTWRALEKLYKEGKLKALGVSNFSCNQLQALYDAAEVKPANQQVECHIYWPQQELRA 199
Query: 722 FCQSEGVVVMGY-XLXGPG 775
C+ GV V Y L PG
Sbjct: 200 LCKKLGVTVTAYAPLGSPG 218
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 107 bits (258), Expect = 8e-24
Identities = 64/185 (34%), Positives = 102/185 (55%), Gaps = 6/185 (3%)
Frame = +2
Query: 221 GVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGEAVKMKVEEGVVKREDIFITTK 400
G K Q+ V+ A+ GYR FDTA VY E+EIG+A+++ + + +KREDIFITTK
Sbjct: 17 GTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILLPKHNLKREDIFITTK 76
Query: 401 LW-NTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLNADYSHSD----VDFMETWRG 565
+ NT V + +++SL L YID+YL+H+P + DY D + TW
Sbjct: 77 MHPNTVE---NVKKLVDESLSLLKTSYIDMYLIHYP--KSFDYGDQDPMNKTLRIATWND 131
Query: 566 LEDAQRMGIVKGIGLSNFNKQQLERVLKEG-TIKPDAXQIEVHLQNVQKEMVEFCQSEGV 742
L + + G ++ +G+S+F + LE + G P Q+E H ++E+ +C+SEG+
Sbjct: 132 LWECKNAGKIRSVGVSSFEIRHLEELKDLGKNFPPCCNQVEYHPHFTREELKNYCKSEGI 191
Query: 743 VVMGY 757
+
Sbjct: 192 FFQAF 196
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 148 SLKMNNGRDMPAIGLGTY 201
S+K+N G D P IGLGTY
Sbjct: 2 SIKLNTGYDCPLIGLGTY 19
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 105 bits (252), Expect = 4e-23
Identities = 55/179 (30%), Positives = 94/179 (52%), Gaps = 1/179 (0%)
Frame = +2
Query: 236 KDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGEAVKMKVEEGVVKREDIFITTKLWNTQ 415
K++ LR V+ GYR DTA VY E +IG ++ + +KREDI+IT+KL +
Sbjct: 23 KEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKREDIWITSKLAPSN 82
Query: 416 HRRTEVAQAINDSLKKLGLDYIDLYLMHWP-IGLNADYSHSDVDFMETWRGLEDAQRMGI 592
+ ++I +SL L ++Y+DL L+HWP L ++ + +E+W + + G
Sbjct: 83 AGVKKARESIEESLSNLKVEYLDLLLIHWPGSSLKSENPANKKLRVESWNVMCEMMAEGK 142
Query: 593 VKGIGLSNFNKQQLERVLKEGTIKPDAXQIEVHLQNVQKEMVEFCQSEGVVVMGYXLXG 769
++ +G+SNF LE + K+ + P Q+E H Q ++V++C + Y G
Sbjct: 143 LRSVGVSNFEICHLEELKKDSNVVPAVNQVEYHPHFHQDDLVKYCNENNIHFQAYSSLG 201
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 104 bits (250), Expect = 7e-23
Identities = 58/189 (30%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Frame = +2
Query: 221 GVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGEAVKMKVEEGVVKREDIFITTK 400
G ++K QL V A+ VGYR FDTA YE E+++G A+K + + EDI++T+K
Sbjct: 16 GTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPRHNICSEDIYLTSK 75
Query: 401 L--WNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLNA-DYSHSDVDF-METWRGL 568
+ +++++ + + +N+SL+ L Y+DL L+H+P L+ D + ++ + +TW L
Sbjct: 76 VFPYSSKNAAELIRKDVNESLELLDRKYLDLVLVHYPRPLDTEDLNENNKMYRKDTWIAL 135
Query: 569 EDAQRMGIVKGIGLSNFNKQQLERVLKEGTIKPDAXQIEVHLQNVQKEMVEFCQSEGVVV 748
E G ++ IG+SN+ +E + TI+P QIE H +K + +C ++
Sbjct: 136 EKLHAEGKIRSIGVSNYEPHHIEEMRSYITIEPQVNQIEYHPHFQRKVLRAYCNKNEILF 195
Query: 749 MGYXLXGPG 775
+ G G
Sbjct: 196 QAFSPLGRG 204
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 98.7 bits (235), Expect = 5e-21
Identities = 55/184 (29%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Frame = +2
Query: 221 GVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGEAVKMKVEEGVVKREDIFITTK 400
G K + + + A+ GYR FDTA Y E+E+GEA+K+ + + + R D+F+T+K
Sbjct: 27 GTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPKHGLSRSDVFLTSK 86
Query: 401 LWNTQHRRTEVAQA-INDSLKKLGLDYIDLYLMHWPIGLNADYSHSDVDFME----TWRG 565
+ E + + +SL+ L DYID+YL+H+P ++D + DV+ E +
Sbjct: 87 FFPESKNCREACRGFVEESLQSLQTDYIDMYLVHYPKPNDSD--NDDVNNAEYRKIAYEV 144
Query: 566 LEDAQRMGIVKGIGLSNFNKQQLERVLKEGTIKPDAXQIEVHLQNVQKEMVEFCQSEGVV 745
LE+A+ G V+ IG+SN+ LE + + P A Q+E H + + ++C+ + +
Sbjct: 145 LEEAKAAGKVRSIGVSNYEIVHLEELKTYAKVPPCANQLEYHPHFARIPLQKYCKEKNIF 204
Query: 746 VMGY 757
+
Sbjct: 205 FQAF 208
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 97.5 bits (232), Expect = 1e-20
Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 7/186 (3%)
Frame = +2
Query: 221 GVVKSKDKQLRDV-VMRAIDVGYRHFDTASVYETEQEIGEAVKMKVEEGVVKREDIFITT 397
G+ + + +Q DV + A+ GYR FDTA++Y+ E +G ++K + + + RED+FITT
Sbjct: 26 GISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLPQFGLTREDVFITT 85
Query: 398 KLWNTQHRRT--EVAQAINDSLKKLGLDYIDLYLMHWP----IGLNADYSHSDVDFMETW 559
K+ T + T E + + +SL L DY+DL L+H+P G + DY + W
Sbjct: 86 KV-RTLNENTVEETEKQLANSLATLQTDYVDLLLIHYPRDRDTGNDDDYEINKSRRKIVW 144
Query: 560 RGLEDAQRMGIVKGIGLSNFNKQQLERVLKEGTIKPDAXQIEVHLQNVQKEMVEFCQSEG 739
+ LE A+ G V+ IG+SN+ L + + I+P Q E + + +FC
Sbjct: 145 QTLEKAKESGRVRSIGVSNYEVYHLVEMFEYAKIRPVLNQYEYQPYLTRPTLKKFCDLNN 204
Query: 740 VVVMGY 757
+VV Y
Sbjct: 205 IVVQSY 210
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 97.1 bits (231), Expect = 1e-20
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 2/170 (1%)
Frame = +2
Query: 254 DVVMRAID-VGYRHFDTASVYETEQEIGEAVKMKVEEGVVKREDIFITTKLWNTQHRRTE 430
D V+ +I GYR DTA Y E+++G AVK V RE++F++TKLW E
Sbjct: 29 DAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVK----NCSVPREEMFLSTKLWPVDCG-DE 83
Query: 431 VAQAINDSLKKLGLDYIDLYLMHWPIGLNADYSHSDVDFME-TWRGLEDAQRMGIVKGIG 607
V A S +KL DY+D+Y++H P D+ + + E TWR +E V+ IG
Sbjct: 84 VYNAFQTSCEKLQTDYLDMYMIHMP--QLPDWIVNQKETKEKTWRQMELLYEDEHVRSIG 141
Query: 608 LSNFNKQQLERVLKEGTIKPDAXQIEVHLQNVQKEMVEFCQSEGVVVMGY 757
+SN++ + L+ +L+ +I P A Q+E+H Q ++ +C G++ MGY
Sbjct: 142 VSNYSIEDLDELLEFASILPHANQVELHPWFHQADLKNYCDELGILTMGY 191
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 60.5 bits (140), Expect = 2e-09
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +2
Query: 404 WNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLNADYSHS-DVDFMETWRGLEDAQ 580
W + + A+ DSLKKL L+Y+DLYL H P + D S + + WR +
Sbjct: 53 WTNELAPGRLEGALRDSLKKLHLEYVDLYLAHMPTAFSDDMSQKIESSVEDIWRQFDAVY 112
Query: 581 RMGIVKGIGLSNFNKQQL 634
+ G+ K +G+SN+N Q+
Sbjct: 113 KAGLAKAVGVSNWNNDQI 130
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 59.7 bits (138), Expect = 3e-09
Identities = 32/72 (44%), Positives = 43/72 (59%)
Frame = +2
Query: 194 AHTLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGEAVKMKVEEGVVK 373
AH++ G +S + + V A+ GY DTAS Y E+ IG A+K + EGVVK
Sbjct: 53 AHSMPAVGLGTWQSNAEDVISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIAEGVVK 112
Query: 374 REDIFITTKLWN 409
RED+FITTK+ N
Sbjct: 113 REDLFITTKVPN 124
>U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory
abnormality protein14 protein.
Length = 439
Score = 38.7 bits (86), Expect = 0.005
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Frame = +2
Query: 221 GVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGEAVKMKVEEGVVKREDIFITTK 400
G+ + + + +V AI G + DT Y Q E++ K + R+ +I+TK
Sbjct: 107 GMFGNVEDSIIKIVETAIKQGINYIDTGYWYS--QSRSESILGKALSKI-PRKAYYISTK 163
Query: 401 L--WNTQHRRT------EVAQAINDSLKKLGLDYIDLYLMHWPIGLNADYS-HSDVDFME 553
+ + + RT ++ +++ +SLK+L L YID+ + +AD++ + + E
Sbjct: 164 VGRFELDYARTFDFRADKILESLTNSLKRLQLTYIDICYVQIH---DADFAPNESIVLYE 220
Query: 554 TWRGLEDAQRMGIVKGIGLSNF 619
T + LE A+ G ++ IGL+ +
Sbjct: 221 TLQALEMAKSSGKIRHIGLTGY 242
>AC024751-4|AAK21505.1| 425|Caenorhabditis elegans Hypothetical
protein Y18H1A.1 protein.
Length = 425
Score = 35.1 bits (77), Expect = 0.067
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +2
Query: 341 VKMKVEEGVVKREDIFITTKLW--NTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGL 514
VK + ++ ++ D+ K W N + ++E A++ +L KLG DY+++ L+ P+G
Sbjct: 128 VKKEYDKLQSQKIDVEKDCKTWKSNPKFNQSEDFPALDSNLVKLGKDYVNISLVDVPLGR 187
Query: 515 NADYSHSDVDFMET--WRGLED 574
N + V E W+ + D
Sbjct: 188 NVHLGQAPVTNTEETFWKAVFD 209
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 34.3 bits (75), Expect = 0.12
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Frame = +2
Query: 227 VKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQ---EIGEAVKMKVEE--GVVKREDIFI 391
VKS D L++++ V FD V ET + E+ EAVK K +E G +K + I
Sbjct: 1044 VKSLDNTLQEIIENPAPVNDTKFDE-KVKETSRAASEVWEAVKQKTKEGGGTIKTKSKAI 1102
Query: 392 TTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGL-NADYSHSDV-DFMETWRG 565
++ + T + +++ + K+G D + + W I + NA +V ++ET G
Sbjct: 1103 KDEIVAALEKLTSIDESVAQA--KVGADAAENDMKRWEIIIENARREIENVLHYLET-EG 1159
Query: 566 LEDAQ 580
E AQ
Sbjct: 1160 EERAQ 1164
>Z99281-3|CAB16508.1| 482|Caenorhabditis elegans Hypothetical
protein Y57G11C.6 protein.
Length = 482
Score = 33.9 bits (74), Expect = 0.15
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Frame = +2
Query: 275 DVGYRHFDTASVYETEQEIGEAVKMKVEEGVVKREDIFITTKLW--NTQHRRTEVAQAIN 448
DV D+ + E ++E + MKV+ V++E K W N+++ ++E A++
Sbjct: 171 DVAKNWMDSIDLAEVKKEFEKLQSMKVD---VEKE-----CKTWKANSKYNQSEDFPALD 222
Query: 449 DSLKKLGLDYIDLYLMHWPIGLNADYSHSDV-DFMET-WRGLEDAQRMGI 592
+L K+ DY+++ + P+G N V D ET W+ + D + + I
Sbjct: 223 SNLLKVEKDYVNISRVEIPLGRNIYIGQVPVKDTEETFWKAVFDKRIVSI 272
>U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defective
protein 5 protein.
Length = 1198
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/103 (19%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Frame = +2
Query: 416 HRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLNADYSHSDVDFMETWRGLEDA--QRMG 589
H + Q +++S + L H G+ + + + + R L D Q++
Sbjct: 1057 HYTSPTRQLLHESTMAVDAIVQKLKKTHNMSGMGPELKETIGNVINESRVLRDFLHQKLI 1116
Query: 590 IVKGIGLSNFNKQQLERVLKE-GTIKPDAXQIEVHLQNVQKEM 715
+ KGI +SN+ + +++++ + G + D +E ++ +KE+
Sbjct: 1117 LFKGIDMSNWKNETVDQLITDLGQLHQDNLMLEEQIKKYKKEL 1159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,761,357
Number of Sequences: 27780
Number of extensions: 372509
Number of successful extensions: 1134
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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