Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_M20
         (906 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0594 - 30473915-30474533,30474667-30474962                       30   2.9  
10_08_1055 + 22587122-22587501,22587578-22588097                       29   5.1  
04_04_1019 + 30166514-30166585,30167207-30167841,30168505-301686...    29   5.1  
02_05_0410 + 28744716-28744841,28745361-28745965,28746151-287462...    29   5.1  
02_02_0363 + 9446055-9446524,9446658-9446771,9446856-9447281,944...    28   8.9  
01_06_0713 - 31402534-31403131,31403281-31403430,31403526-31403728     28   8.9  

>01_06_0594 - 30473915-30474533,30474667-30474962
          Length = 304

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 539 PFPRSLTRCPRSXGCGXRYQLTQGR 613
           PFPR+  RC  S GC  R Q+ + R
Sbjct: 96  PFPRAYYRCSSSKGCPARKQVERSR 120


>10_08_1055 + 22587122-22587501,22587578-22588097
          Length = 299

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 539 PFPRSLTRCPRSXGCGXRYQLTQGR 613
           P+PR   RC  S GC  R Q+ + R
Sbjct: 169 PYPRGYYRCSSSKGCSARKQVERSR 193


>04_04_1019 +
           30166514-30166585,30167207-30167841,30168505-30168645,
           30169604-30170300
          Length = 514

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 539 PFPRSLTRCPRSXGCGXRYQLTQGR 613
           P+PR   RC  S GC  R Q+ + R
Sbjct: 280 PYPRGYYRCSSSKGCSARKQVERSR 304


>02_05_0410 +
           28744716-28744841,28745361-28745965,28746151-28746270,
           28746597-28746737,28748626-28749370
          Length = 578

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 539 PFPRSLTRCPRSXGCGXRYQLTQGR 613
           P+PR   RC  S GC  R Q+ + R
Sbjct: 328 PYPRGYYRCSSSKGCSARKQVERSR 352


>02_02_0363 +
           9446055-9446524,9446658-9446771,9446856-9447281,
           9447812-9447893,9447964-9448020,9448633-9448881,
           9448978-9449109,9449163-9449291
          Length = 552

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 539 PFPRSLTRCPRSXGCGXRYQLTQGR 613
           P+PR   RC  S GC  R Q+ + R
Sbjct: 192 PYPRGYYRCSSSKGCPARKQVERSR 216


>01_06_0713 - 31402534-31403131,31403281-31403430,31403526-31403728
          Length = 316

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 539 PFPRSLTRCPRSXGCGXRYQLTQGR 613
           P+PR   RC  S GC  R Q+ + R
Sbjct: 115 PYPRGYYRCSSSKGCPARKQVERSR 139


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,218,755
Number of Sequences: 37544
Number of extensions: 225942
Number of successful extensions: 621
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)