Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_M19
         (849 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z95559-3|CAB08998.1|  786|Caenorhabditis elegans Hypothetical pr...   126   2e-29
U58751-8|AAB00659.2|  635|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z93378-1|CAB07582.1|  303|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U39996-6|AAA81092.1|  595|Caenorhabditis elegans Hypothetical pr...    29   5.5  
U40941-9|AAX55692.1|  294|Caenorhabditis elegans Hypothetical pr...    28   9.6  

>Z95559-3|CAB08998.1|  786|Caenorhabditis elegans Hypothetical
           protein Y41E3.4 protein.
          Length = 786

 Score =  126 bits (305), Expect = 2e-29
 Identities = 64/181 (35%), Positives = 112/181 (61%), Gaps = 2/181 (1%)
 Frame = +3

Query: 192 EQKAKETLKNANVTKVLLAALDEVQLQSLPLGA--GILIYHLATKIKPQTMSKLNFICQY 365
           + K  ETLKN  +T+ +  ++ ++  +S  +    G L+Y LATK+KPQ  +    + +Y
Sbjct: 14  DSKVAETLKNVKLTETI-GSIVKLASESGEISKQKGTLLYQLATKLKPQVAAHTPLVVKY 72

Query: 366 IASGKLDSTLRVDAALDYLLGNINEANVNIEEFEKACGVGVIVTPEQVEQAVEKHMVKYK 545
           I +  + +  ++ AA++YLL +  +  + + +FEK+CGVGV+VT + +E AV K + +++
Sbjct: 73  IMNDGIKTEPQLSAAIEYLLSHTVKG-IQVPDFEKSCGVGVVVTIDDIEAAVTKVIGQHR 131

Query: 546 QELLEKRYRFNSGIIMQAVRADLTWADGKAIKSEVDVQIFDLXGPKTEADLXPVPKAXKX 725
           ++++ +RY F +G ++  +RA L WADG   K EVD++  +L GPKT  DL P  K  K 
Sbjct: 132 EKIVAERYSFPAGKLLGELRALLPWADGAITKKEVDLRFLELLGPKTAEDLAPKKKEKKP 191

Query: 726 Q 728
           +
Sbjct: 192 E 192


>U58751-8|AAB00659.2|  635|Caenorhabditis elegans Hypothetical
           protein C07G1.2 protein.
          Length = 635

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = -3

Query: 697 RSASVLGPXKSKICTSTSLFIALPSA--QVRSALTACMIIPELNLYLFSNSSCLYFTICF 524
           +S S LGP +      T+     PS+  Q+R    +  + P L  +   N SCL    C 
Sbjct: 483 QSESSLGPLQPTTLHPTNPSFDSPSSVSQMRRTSPSATLAPRLPAW---NLSCLREPNCT 539

Query: 523 STACSTCSGVTITPTPQA 470
           ST  STC  +  +   QA
Sbjct: 540 STVISTCEPIRCSHCQQA 557


>Z93378-1|CAB07582.1|  303|Caenorhabditis elegans Hypothetical
           protein F19H8.2 protein.
          Length = 303

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 643 LFIALPSAQVRSALTACMIIPELNLYLFSNSSCLYFTICFSTACS 509
           LFI+L    V      C I+     + FS+S+C Y  +C   ACS
Sbjct: 8   LFISLTFVGVLETADICDILDANYCFYFSDSAC-YINLCQCEACS 51


>U39996-6|AAA81092.1|  595|Caenorhabditis elegans Hypothetical
           protein C56E6.5 protein.
          Length = 595

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = -3

Query: 658 CTSTSLFIALPSAQVRSALTACMIIPELNLYLFSNSSCLYFTICFSTACSTCSGVTITPT 479
           C  +SLF+ +     +S     M    LNL+L S  S   FTIC +     CS + I  T
Sbjct: 424 CIQSSLFVGIVLWSFKSE---AMFQISLNLFLLSIFSFSIFTIC-ARYLKNCSNIVILQT 479


>U40941-9|AAX55692.1|  294|Caenorhabditis elegans Hypothetical
           protein F35C8.1 protein.
          Length = 294

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +2

Query: 245 CGVR*GAIAVASTWCRHFDLPSSYQNQTSNYEQVKLYLPIYCIRKTGFNVASRR 406
           CG+   +IAV+ T C+ +  P       SN     +   I+ +  T F +A+ R
Sbjct: 208 CGILENSIAVSDTGCQQYTAPEILVKGVSNSPGYSIKSDIWSLGITIFELATLR 261


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,705,727
Number of Sequences: 27780
Number of extensions: 282520
Number of successful extensions: 823
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)