Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_M18
(922 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 36 0.054
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.094
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.094
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.094
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.094
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.094
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.29
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.38
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.38
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.38
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 32 0.50
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 32 0.50
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.50
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 1.2
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 31 1.5
AL117203-6|CAB60419.1| 234|Caenorhabditis elegans Hypothetical ... 31 1.5
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 30 2.7
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 24 4.5
Z69386-1|CAA93430.1| 241|Caenorhabditis elegans Hypothetical pr... 29 4.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.7
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.7
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 4.7
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 29 6.2
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 29 6.2
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 6.2
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 6.2
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 6.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 8.2
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 28 8.2
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 28 8.2
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 35.5 bits (78), Expect = 0.054
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +3
Query: 675 KGPPPXKXXQKIPPPHXXX-GXXPPGIFKXPRGF-PPXKXPL-XPPXXPXP 818
+GPP Q+ P P+ G PPG + P GF PP P PP P P
Sbjct: 715 QGPPGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYPPGAPPP 765
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.7 bits (76), Expect = 0.094
Identities = 19/63 (30%), Positives = 21/63 (33%)
Frame = +3
Query: 681 PPPXKXXQKIPPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPXXXXPLFPPX 860
PPP + PP PP + P G PP P P P P P PP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS 376
Query: 861 XXG 869
G
Sbjct: 377 GHG 379
Score = 29.1 bits (62), Expect = 4.7
Identities = 23/80 (28%), Positives = 28/80 (35%), Gaps = 11/80 (13%)
Frame = +3
Query: 663 GFSQKGPPPXKXXQKIPPPHXXXGXXP-----PGIFKXP---RGFPPXKXPLXPPXXP-- 812
G + + PPP PPP G P PG+ P R PP + PP P
Sbjct: 282 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGM 341
Query: 813 -XPXXXPXXXXPLFPPXXXG 869
P P P +P G
Sbjct: 342 RYPGGMPPPPPPRYPSAGPG 361
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.094
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Frame = +3
Query: 678 GPPPXKXXQKI---PPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPXXXXPL 848
GPPP I PPP G PP P PP P P P P P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 849 FPPXXXGG 872
PP GG
Sbjct: 772 PPPPPPGG 779
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 3/74 (4%)
Frame = +3
Query: 681 PPPXKXXQKI---PPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPXXXXPLF 851
PPP I PPP G PP I P PP PP P P P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPP-ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Query: 852 PPXXXGGPFXXTXP 893
PP P P
Sbjct: 788 PPPGMFAPMAPVIP 801
Score = 29.5 bits (63), Expect = 3.5
Identities = 25/84 (29%), Positives = 25/84 (29%), Gaps = 5/84 (5%)
Frame = +3
Query: 681 PPPXKXXQKIPPPHXXXGXXPPGIF---KXPRGFPPXKXPLXPPXXPXPXXXPXXXXPLF 851
PPP K P P I P G PP PP P P P
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITG--GPPPPPPPGGLPPITGGPP 743
Query: 852 PPXXXGG--PFXXTXPXXXXXPGG 917
PP GG P P PGG
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGG 767
Score = 25.0 bits (52), Expect(2) = 0.81
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +3
Query: 447 PXPXGXXXXFLGPXPXPPPXXPXPXXFGWGKXFXXPXXGXFGXPXNPGXTPEKTF 611
P P G G P PPP P G G P G G P P P F
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPPPG--GCPPPPPPPPPGGF 780
Score = 25.0 bits (52), Expect(2) = 0.81
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 681 PPPXKXXQKIPPPHXXXGXXPPGIFKXPRGFPPXKXP 791
PPP + PPP G P P PP K P
Sbjct: 774 PPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.094
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Frame = +3
Query: 678 GPPPXKXXQKI---PPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPXXXXPL 848
GPPP I PPP G PP P PP P P P P P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 849 FPPXXXGG 872
PP GG
Sbjct: 772 PPPPPPGG 779
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 3/74 (4%)
Frame = +3
Query: 681 PPPXKXXQKI---PPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPXXXXPLF 851
PPP I PPP G PP I P PP PP P P P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPP-ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Query: 852 PPXXXGGPFXXTXP 893
PP P P
Sbjct: 788 PPPGMFAPMAPVIP 801
Score = 29.5 bits (63), Expect = 3.5
Identities = 25/84 (29%), Positives = 25/84 (29%), Gaps = 5/84 (5%)
Frame = +3
Query: 681 PPPXKXXQKIPPPHXXXGXXPPGIF---KXPRGFPPXKXPLXPPXXPXPXXXPXXXXPLF 851
PPP K P P I P G PP PP P P P
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITG--GPPPPPPPGGLPPITGGPP 743
Query: 852 PPXXXGG--PFXXTXPXXXXXPGG 917
PP GG P P PGG
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGG 767
Score = 25.0 bits (52), Expect(2) = 0.81
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +3
Query: 447 PXPXGXXXXFLGPXPXPPPXXPXPXXFGWGKXFXXPXXGXFGXPXNPGXTPEKTF 611
P P G G P PPP P G G P G G P P P F
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPPPG--GCPPPPPPPPPGGF 780
Score = 25.0 bits (52), Expect(2) = 0.81
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 681 PPPXKXXQKIPPPHXXXGXXPPGIFKXPRGFPPXKXP 791
PPP + PPP G P P PP K P
Sbjct: 774 PPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.7 bits (76), Expect = 0.094
Identities = 19/63 (30%), Positives = 21/63 (33%)
Frame = +3
Query: 681 PPPXKXXQKIPPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPXXXXPLFPPX 860
PPP + PP PP + P G PP P P P P P PP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS 386
Query: 861 XXG 869
G
Sbjct: 387 GHG 389
Score = 29.1 bits (62), Expect = 4.7
Identities = 23/80 (28%), Positives = 28/80 (35%), Gaps = 11/80 (13%)
Frame = +3
Query: 663 GFSQKGPPPXKXXQKIPPPHXXXGXXP-----PGIFKXP---RGFPPXKXPLXPPXXP-- 812
G + + PPP PPP G P PG+ P R PP + PP P
Sbjct: 292 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGM 351
Query: 813 -XPXXXPXXXXPLFPPXXXG 869
P P P +P G
Sbjct: 352 RYPGGMPPPPPPRYPSAGPG 371
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.094
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Frame = +3
Query: 678 GPPPXKXXQKI---PPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPXXXXPL 848
GPPP I PPP G PP P PP P P P P P
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Query: 849 FPPXXXGG 872
PP GG
Sbjct: 355 PPPPPPGG 362
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 3/74 (4%)
Frame = +3
Query: 681 PPPXKXXQKI---PPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPXXXXPLF 851
PPP I PPP G PP I P PP PP P P P
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPP-ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Query: 852 PPXXXGGPFXXTXP 893
PP P P
Sbjct: 371 PPPGMFAPMAPVIP 384
Score = 29.5 bits (63), Expect = 3.5
Identities = 25/84 (29%), Positives = 25/84 (29%), Gaps = 5/84 (5%)
Frame = +3
Query: 681 PPPXKXXQKIPPPHXXXGXXPPGIF---KXPRGFPPXKXPLXPPXXPXPXXXPXXXXPLF 851
PPP K P P I P G PP PP P P P
Sbjct: 269 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITG--GPPPPPPPGGLPPITGGPP 326
Query: 852 PPXXXGG--PFXXTXPXXXXXPGG 917
PP GG P P PGG
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGG 350
Score = 25.0 bits (52), Expect(2) = 0.83
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +3
Query: 447 PXPXGXXXXFLGPXPXPPPXXPXPXXFGWGKXFXXPXXGXFGXPXNPGXTPEKTF 611
P P G G P PPP P G G P G G P P P F
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPPPG--GCPPPPPPPPPGGF 363
Score = 25.0 bits (52), Expect(2) = 0.83
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 681 PPPXKXXQKIPPPHXXXGXXPPGIFKXPRGFPPXKXP 791
PPP + PPP G P P PP K P
Sbjct: 357 PPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 393
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.1 bits (72), Expect = 0.29
Identities = 21/65 (32%), Positives = 23/65 (35%)
Frame = +3
Query: 663 GFSQKGPPPXKXXQKIPPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPXXXX 842
G S PPP + PPP PP P+ PP P P P P P
Sbjct: 134 GGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNP-PRTPPSPIP 192
Query: 843 PLFPP 857
P PP
Sbjct: 193 P--PP 195
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/65 (29%), Positives = 23/65 (35%), Gaps = 6/65 (9%)
Frame = +3
Query: 681 PPPXKXXQKIPPP----HXXXGXXPPGIFKXPRG--FPPXKXPLXPPXXPXPXXXPXXXX 842
P P + ++P P H PP K G PP P P P P P
Sbjct: 101 PVPGQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRP 160
Query: 843 PLFPP 857
P+ PP
Sbjct: 161 PMTPP 165
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.7 bits (71), Expect = 0.38
Identities = 32/134 (23%), Positives = 34/134 (25%), Gaps = 2/134 (1%)
Frame = +3
Query: 480 GPXPXPPPXXPXPXXFGWGKXFXXPXXGXFGXPXNPGXTPEKTFYQKAXXXXXXXXXXXX 659
G P PPP P G G P G P G P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGS-PPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 293
Query: 660 XGFSQKGPPP--XKXXQKIPPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPX 833
G PPP +PPP P G P PP + P P P
Sbjct: 294 AGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP---PPPRQKRQAPERSPPTGSPP 350
Query: 834 XXXPLFPPXXXGGP 875
P GGP
Sbjct: 351 TGSPPTGRPPRGGP 364
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.7 bits (71), Expect = 0.38
Identities = 32/134 (23%), Positives = 34/134 (25%), Gaps = 2/134 (1%)
Frame = +3
Query: 480 GPXPXPPPXXPXPXXFGWGKXFXXPXXGXFGXPXNPGXTPEKTFYQKAXXXXXXXXXXXX 659
G P PPP P G G P G P G P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGS-PPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 314
Query: 660 XGFSQKGPPP--XKXXQKIPPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPX 833
G PPP +PPP P G P PP + P P P
Sbjct: 315 AGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP---PPPRQKRQAPERSPPTGSPP 371
Query: 834 XXXPLFPPXXXGGP 875
P GGP
Sbjct: 372 TGSPPTGRPPRGGP 385
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.7 bits (71), Expect = 0.38
Identities = 32/134 (23%), Positives = 34/134 (25%), Gaps = 2/134 (1%)
Frame = +3
Query: 480 GPXPXPPPXXPXPXXFGWGKXFXXPXXGXFGXPXNPGXTPEKTFYQKAXXXXXXXXXXXX 659
G P PPP P G G P G P G P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGS-PPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 299
Query: 660 XGFSQKGPPP--XKXXQKIPPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPX 833
G PPP +PPP P G P PP + P P P
Sbjct: 300 AGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP---PPPRQKRQAPERSPPTGSPP 356
Query: 834 XXXPLFPPXXXGGP 875
P GGP
Sbjct: 357 TGSPPTGRPPRGGP 370
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 32.3 bits (70), Expect = 0.50
Identities = 26/79 (32%), Positives = 28/79 (35%), Gaps = 14/79 (17%)
Frame = +3
Query: 681 PPPXKXXQKIPPPHXXXGXXPPGIFK--------XPRGFPPXKXPL------XPPXXPXP 818
PPP + PPPH PP PRGF P P+ PP P P
Sbjct: 297 PPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPP 356
Query: 819 XXXPXXXXPLFPPXXXGGP 875
P P PP GGP
Sbjct: 357 --PPHFMRPSSPP-TDGGP 372
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Frame = +3
Query: 669 SQKGPPPXKXXQKIPPPHXXXGXXPP--GIF-KXPRG-FPPXKXPLXPPXXPXPXXXPXX 836
S +GPPP P H PP G F PRG FPP P P P
Sbjct: 266 SYRGPPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPP 325
Query: 837 XXPLFPP 857
+ PP
Sbjct: 326 HFGMGPP 332
Score = 28.3 bits (60), Expect = 8.2
Identities = 25/80 (31%), Positives = 27/80 (33%), Gaps = 3/80 (3%)
Frame = +1
Query: 682 PPPXRXXKKFPPXIXXXXXPPXGFLKXPGVFPPXXPPFXPPXFPXXXVXRXXFXPFFPLX 861
PPP FPP PP G+ PP PP PP F R P P+
Sbjct: 290 PPPFGF---FPPPPRGHFPPPPPHFMGRGMPPPFMPP--PPHF-GMGPPRGFMPPPHPMM 343
Query: 862 XXXG---LFXXPXPXXFXXP 912
G F P P F P
Sbjct: 344 FRGGPYPPFFPPPPPHFMRP 363
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 32.3 bits (70), Expect = 0.50
Identities = 26/79 (32%), Positives = 28/79 (35%), Gaps = 14/79 (17%)
Frame = +3
Query: 681 PPPXKXXQKIPPPHXXXGXXPPGIFK--------XPRGFPPXKXPL------XPPXXPXP 818
PPP + PPPH PP PRGF P P+ PP P P
Sbjct: 297 PPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPP 356
Query: 819 XXXPXXXXPLFPPXXXGGP 875
P P PP GGP
Sbjct: 357 --PPHFMRPSSPP-TDGGP 372
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Frame = +3
Query: 669 SQKGPPPXKXXQKIPPPHXXXGXXPP--GIF-KXPRG-FPPXKXPLXPPXXPXPXXXPXX 836
S +GPPP P H PP G F PRG FPP P P P
Sbjct: 266 SYRGPPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPP 325
Query: 837 XXPLFPP 857
+ PP
Sbjct: 326 HFGMGPP 332
Score = 28.3 bits (60), Expect = 8.2
Identities = 25/80 (31%), Positives = 27/80 (33%), Gaps = 3/80 (3%)
Frame = +1
Query: 682 PPPXRXXKKFPPXIXXXXXPPXGFLKXPGVFPPXXPPFXPPXFPXXXVXRXXFXPFFPLX 861
PPP FPP PP G+ PP PP PP F R P P+
Sbjct: 290 PPPFGF---FPPPPRGHFPPPPPHFMGRGMPPPFMPP--PPHF-GMGPPRGFMPPPHPMM 343
Query: 862 XXXG---LFXXPXPXXFXXP 912
G F P P F P
Sbjct: 344 FRGGPYPPFFPPPPPHFMRP 363
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 32.3 bits (70), Expect = 0.50
Identities = 29/128 (22%), Positives = 35/128 (27%)
Frame = +3
Query: 420 GGFXXXKKXPXPXGXXXXFLGPXPXPPPXXPXPXXFGWGKXFXXPXXGXFGXPXNPGXTP 599
GG + P G F G P P P P G P G G P
Sbjct: 1487 GGGPPMRGGPPMRGGPPMFRGGPPGPGRGMPSPMMRGSSMRGGFPQRGG-GPGMGPSQYY 1545
Query: 600 EKTFYQKAXXXXXXXXXXXXXGFSQKGPPPXKXXQKIPPPHXXXGXXPPGIFKXPRGFPP 779
+ + + GPPP + P G PP + P G PP
Sbjct: 1546 HDSPQNRGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPP 1605
Query: 780 XKXPLXPP 803
PP
Sbjct: 1606 PNGGPPPP 1613
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = +3
Query: 681 PPPXKXXQKIPPPHXXXGXXPPGIFKXPRGFP---PXKXPLXPPXXPXPXXXP 830
PPP +PPP PP + K P G P P PL P P P
Sbjct: 1346 PPPSDDLTPVPPPPPP----PPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPP 1394
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = +3
Query: 681 PPPXKXXQKIPPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPXXXXPLFP 854
P P Q PP G PP + P G P + PP P P P P
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGAPEIP 828
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = +3
Query: 681 PPPXKXXQKIPPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPXXXXPLFP 854
P P Q PP G PP + P G P + PP P P P P
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGAPEIP 828
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Frame = +3
Query: 714 PPHXXXGXXPPGI--FKXPRGFPPXKXPLXPPXXPXPXXXPXXXXPLFPPXXXGGPFXXT 887
PP PG+ K P G P PP P P P P PP G P
Sbjct: 193 PPGPSGPQGAPGVPGEKGPTGEPGKVINGAPPGPPGPPGPPGPQGPPGPPGKDGQPGKAG 252
Query: 888 XPXXXXXPG 914
P PG
Sbjct: 253 PPGLPGDPG 261
>AL117203-6|CAB60419.1| 234|Caenorhabditis elegans Hypothetical
protein Y48C3A.9 protein.
Length = 234
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +3
Query: 732 GXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPXXXXPLFPPXXXGGPF 878
G PPG P G PP P+ PP P + PP G PF
Sbjct: 141 GRMPPGAMA-PGGMPPGAFPMFPPDPRLQRMAPNQGMRM-PPPPVGQPF 187
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/54 (27%), Positives = 17/54 (31%)
Frame = +3
Query: 684 PPXKXXQKIPPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPXXXXP 845
PP PPP PG++ P G P P P P P P
Sbjct: 151 PPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPGP 204
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/54 (27%), Positives = 17/54 (31%)
Frame = +3
Query: 684 PPXKXXQKIPPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPXXXXP 845
PP PPP PG++ P G P P P P P P
Sbjct: 151 PPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPGP 204
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 24.2 bits (50), Expect(2) = 4.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 711 PPPHXXXGXXPPG 749
PPPH G PPG
Sbjct: 214 PPPHGYEGYPPPG 226
Score = 23.4 bits (48), Expect(2) = 4.5
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +3
Query: 483 PXPXPPPXXPXPXXFGWGKXFXXPXXGXFGXPXNPGXTP 599
P PP P P G + P G G P P P
Sbjct: 178 PPVYPPFGQPAPQMSGQRMPYPYPPQGMPGYPGGPPPPP 216
>Z69386-1|CAA93430.1| 241|Caenorhabditis elegans Hypothetical
protein ZK596.1 protein.
Length = 241
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -2
Query: 861 PKGEKGGKXXPXNXXGGEXRGXKGGXXR--GENPWXF*KSXGGXXPXXNXGG 712
PKGE GG+ GG G GG G N F + GG P N GG
Sbjct: 155 PKGEHGGQGPFGGFPGGHQGGFPGGNQGGFGGNQGGFGGNQGG-FPFGNQGG 205
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/65 (32%), Positives = 21/65 (32%)
Frame = +3
Query: 663 GFSQKGPPPXKXXQKIPPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPXXXX 842
G GPPP PPP PP P PP P P P P P
Sbjct: 21 GCCSMGPPPC------PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMC 74
Query: 843 PLFPP 857
P PP
Sbjct: 75 PPPPP 79
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/69 (27%), Positives = 20/69 (28%)
Frame = +3
Query: 711 PPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPXXXXPLFPPXXXGGPFXXTX 890
PPP PP P PP P PP P P P F P +
Sbjct: 56 PPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCPCMMQRPSFYPSYVPQYYQPMM 115
Query: 891 PXXXXXPGG 917
P GG
Sbjct: 116 PQPMPTAGG 124
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 390 FFFXGXGGGXGGFXXXKKXPXPXGXXXXFLGPXPXPPPXXPXP 518
F F GGG GG P G P PPP P P
Sbjct: 18 FLFPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPPP 60
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +3
Query: 714 PPHXXXGXXPPGIFKXPR---GFPPXKXPLXPPXXPXPXXXPXXXXPLFPPXXXGGP 875
PP PPG P G P + PP P P P P PP G P
Sbjct: 219 PPGPRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPGPPGPFGPPGDSGEP 275
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +3
Query: 714 PPHXXXGXXPPGIFKXPR---GFPPXKXPLXPPXXPXPXXXPXXXXPLFPPXXXGGP 875
PP PPG P G P + PP P P P P PP G P
Sbjct: 219 PPGPRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPGPPGPFGPPGDSGEP 275
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/67 (32%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
Frame = +3
Query: 678 GPPPXKXXQ-KIPPPHXXXGXXPP--GIFKXPRGFPPXKXPLXPPXXPXPXXXP----XX 836
GPPP +PPP G PP G+ P PP L PP P P
Sbjct: 88 GPPPFMPPPIGMPPP--PLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSA 145
Query: 837 XXPLFPP 857
P+ PP
Sbjct: 146 AAPIVPP 152
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/67 (32%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
Frame = +3
Query: 678 GPPPXKXXQ-KIPPPHXXXGXXPP--GIFKXPRGFPPXKXPLXPPXXPXPXXXP----XX 836
GPPP +PPP G PP G+ P PP L PP P P
Sbjct: 111 GPPPFMPPPIGMPPP--PLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSA 168
Query: 837 XXPLFPP 857
P+ PP
Sbjct: 169 AAPIVPP 175
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/67 (32%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
Frame = +3
Query: 678 GPPPXKXXQ-KIPPPHXXXGXXPP--GIFKXPRGFPPXKXPLXPPXXPXPXXXP----XX 836
GPPP +PPP G PP G+ P PP L PP P P
Sbjct: 361 GPPPFMPPPIGMPPP--PLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSA 418
Query: 837 XXPLFPP 857
P+ PP
Sbjct: 419 AAPIVPP 425
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +3
Query: 681 PPPXKXXQKIPPPHXXXG--XXPPGIFKXPRGFPPXKXPLXPPXXPXP 818
PPP IPPP G PP +F P PP P P P
Sbjct: 85 PPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRP 132
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/66 (27%), Positives = 20/66 (30%)
Frame = +3
Query: 678 GPPPXKXXQKIPPPHXXXGXXPPGIFKXPRGFPPXKXPLXPPXXPXPXXXPXXXXPLFPP 857
G PP + + I PP P P G P P P P P PP
Sbjct: 135 GKPPVQPCEPITPPPCKPCPDGPAGPPGPPGAPGDAGTNGAPGAPGGDAPPGEAGPKGPP 194
Query: 858 XXXGGP 875
G P
Sbjct: 195 GPPGSP 200
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 517 GQGXXGGGXGXGPKXXXXFPXGXGXFLXXXXPPXPPPXP 401
G G GGG G G + G G + PP PPP P
Sbjct: 39 GGGGCGGGCGYGGGGGCGYGGGYGCGI----PPPPPPPP 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,881,956
Number of Sequences: 27780
Number of extensions: 240710
Number of successful extensions: 1045
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -