Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_M11
         (906 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1468 + 33811471-33811657,33811888-33811980,33812899-338130...    31   1.3  
11_01_0385 + 2915532-2916482                                           28   8.9  

>04_04_1468 +
           33811471-33811657,33811888-33811980,33812899-33813027,
           33813089-33813166,33813377-33813435,33813522-33813644,
           33814225-33814282,33814383-33814468,33814564-33814635
          Length = 294

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -2

Query: 188 YLAXLVXSXIALHNLIXNKITXRD 117
           YL+ L+ S IALHNLI NK+  ++
Sbjct: 253 YLSSLIRSVIALHNLINNKMLNKE 276


>11_01_0385 + 2915532-2916482
          Length = 316

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +1

Query: 811 PLEXLPSXXPPLXXNPXPFXRXXPCPPF 894
           PL   PS  PP    P P  +  P PPF
Sbjct: 224 PLPPFPSHPPPTPAWPQPGNKWPPLPPF 251


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,519,517
Number of Sequences: 37544
Number of extensions: 167017
Number of successful extensions: 208
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)