Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_M11
         (906 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D50063-1|BAA08780.1|  324|Homo sapiens proteasome subunit p40 / ...    38   0.050
BC012606-1|AAH12606.1|  324|Homo sapiens proteasome (prosome, ma...    38   0.050
BC000338-1|AAH00338.1|  326|Homo sapiens PSMD7 protein protein.        38   0.050

>D50063-1|BAA08780.1|  324|Homo sapiens proteasome subunit p40 /
           Mov34 protein protein.
          Length = 324

 Score = 37.9 bits (84), Expect = 0.050
 Identities = 17/25 (68%), Positives = 19/25 (76%)
 Frame = -2

Query: 188 YLAXLVXSXIALHNLIXNKITXRDA 114
           YLA L+ S +ALHNLI NKI  RDA
Sbjct: 261 YLASLIRSVVALHNLINNKIANRDA 285


>BC012606-1|AAH12606.1|  324|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
           protein.
          Length = 324

 Score = 37.9 bits (84), Expect = 0.050
 Identities = 17/25 (68%), Positives = 19/25 (76%)
 Frame = -2

Query: 188 YLAXLVXSXIALHNLIXNKITXRDA 114
           YLA L+ S +ALHNLI NKI  RDA
Sbjct: 261 YLASLIRSVVALHNLINNKIANRDA 285


>BC000338-1|AAH00338.1|  326|Homo sapiens PSMD7 protein protein.
          Length = 326

 Score = 37.9 bits (84), Expect = 0.050
 Identities = 17/25 (68%), Positives = 19/25 (76%)
 Frame = -2

Query: 188 YLAXLVXSXIALHNLIXNKITXRDA 114
           YLA L+ S +ALHNLI NKI  RDA
Sbjct: 261 YLASLIRSVVALHNLINNKIANRDA 285


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,855,268
Number of Sequences: 237096
Number of extensions: 952914
Number of successful extensions: 1000
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)