Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_M05
(960 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.008
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.015
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 34 0.026
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.026
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.045
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 31 0.18
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.42
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.97
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.3
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 27 5.2
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 9.1
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.9 bits (79), Expect = 0.008
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 7/56 (12%)
Frame = +3
Query: 717 PPPPPXXXPP-----EXXPSXXPRGAXXXXXXKNXPGLP--PXXXPPXGPPXPPPP 863
PPP P PP PS P A K+ P P P PP P PPPP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 31.9 bits (69), Expect = 0.14
Identities = 21/78 (26%), Positives = 23/78 (29%), Gaps = 2/78 (2%)
Frame = +1
Query: 505 PXPPPXXGETXPPXXXXR--GLPPTPPRSGEIXPSKXXGXXTPAQKPFXXPGPXPXGKXX 678
P PP E PP +PP P S PSK + P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 679 TXAPSXXXXXXQNPPPPP 732
PS PPPP
Sbjct: 188 PSLPSAVPPMPPKVPPPP 205
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.1 bits (77), Expect = 0.015
Identities = 33/149 (22%), Positives = 43/149 (28%), Gaps = 6/149 (4%)
Frame = +1
Query: 469 PPXGXGGFFXGXPXPPP----XXGETXPPXXXXRGLPPTPPRSGEIXPSKXXGXXTPAQK 636
PP G G P PPP + P R PP PP + + ++
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRA 384
Query: 637 PFXXPGPXP--XGKXXTXAPSXXXXXXQNPPPPPXXXXXXXXXXXXXXXXXXRXXXKTXP 810
P P P G+ P + PP P P
Sbjct: 385 VSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Query: 811 GSPPXXXPPXAPLXPXPRXXXXXKSPXXP 897
+PP PP AP+ P P +P P
Sbjct: 445 AAPP--LPPSAPIAP-PLPAGMPAAPPLP 470
Score = 33.1 bits (72), Expect = 0.060
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = +3
Query: 711 TKPPPPPXXXPPEXXPSXXPRGAXXXXXXKNXPGLPPXXXPPXGPPXPPPPXG 869
T P P P PP PS P + P PP PP P PP P G
Sbjct: 414 TPPVPTPPSLPPSAPPSLPP--SAPPSLPMGAPAAPP--LPPSAPIAPPLPAG 462
Score = 31.9 bits (69), Expect = 0.14
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +3
Query: 690 LXXXKXXTKPPPPPXXXPPEXXPSXXPRGAXXXXXXKNXPGLP-PXXXPPXGPPXPPP 860
L + + PP PP P P+ P G + P +P P PP PP PP
Sbjct: 379 LSSSRAVSNPPAPPPAIPGRSAPALPPLG---NASRTSTPPVPTPPSLPPSAPPSLPP 433
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +2
Query: 641 LXXPGXPPXGXXXQXXPLXPXXXXKTPPPPXXXXPRXXPLXXXQGGPPP 787
L P PP PL P PPPP PR P Q PPP
Sbjct: 336 LPPPPPPPRSNAAGSIPLPPQGRSAPPPPP----PRSAPSTGRQ--PPP 378
Score = 27.1 bits (57), Expect = 3.9
Identities = 20/55 (36%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = +3
Query: 714 KPPPPPXXXPPEXXPSXXPRGAXXXXXXKNXPGLPPXXXPP---XGPPXPPPPXG 869
K PPPP PP PS RG + LPP PP P PP G
Sbjct: 309 KRPPPP---PP---PSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQG 357
Score = 25.8 bits (54), Expect = 9.1
Identities = 20/75 (26%), Positives = 21/75 (28%), Gaps = 7/75 (9%)
Frame = +3
Query: 660 PPWEXXNXRXLXXXKXXTKPPPPPXXXPPEXXPSXXPRGAXXXXXXKNXPGLPP------ 821
PP + R K PPP P P G P PP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG 349
Query: 822 -XXXPPXGPPXPPPP 863
PP G PPPP
Sbjct: 350 SIPLPPQGRSAPPPP 364
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 34.3 bits (75), Expect = 0.026
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +3
Query: 717 PPPPPXXXPPEXXPSXXPRGAXXXXXXKNXPGLPPXXXPPXGPPXPP 857
PPPPP P S P + + +PP P PP PP
Sbjct: 240 PPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = +3
Query: 717 PPPPPXXXPPEXXPSXXPRGAXXXXXXKNXPGLPPXXXPPXGPPXPPPP 863
PPPPP + + P + P +PP P P P PP
Sbjct: 192 PPPPPPAVEDQAADANEPDDYYSSGRAVS-PEIPPTYTPKQADPLPAPP 239
Score = 28.3 bits (60), Expect = 1.7
Identities = 20/76 (26%), Positives = 24/76 (31%)
Frame = +1
Query: 505 PXPPPXXGETXPPXXXXRGLPPTPPRSGEIXPSKXXGXXTPAQKPFXXPGPXPXGKXXTX 684
P PPP T PP P P R+ S+ PA P P P +
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPA-TPSQPPRPPTNASTRST 294
Query: 685 APSXXXXXXQNPPPPP 732
S + PP P
Sbjct: 295 GTSSSMAHSYDSPPSP 310
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.026
Identities = 21/58 (36%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Frame = +3
Query: 702 KXXTKPPPPPXXXPPEXXPSXXPRGAXXXXXXKNXPGLPPXXXPP----XGPPXPPPP 863
K K PPPP P P+ P G PP PP GPP PPPP
Sbjct: 726 KLLLKSPPPP--PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 33.5 bits (73), Expect = 0.045
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +3
Query: 717 PPPPPXXXPPEXXPSXXPRGAXXXXXXKNXPGLPPXXXPPXGPP--XPPPP 863
PPPPP P P+ P P PP GPP PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.97
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +1
Query: 568 PTPPRSGEIXPSKXXGXXTPAQKPFXXPGPXPXGKXXTXAPSXXXXXXQNPPPPP 732
P PP I P TPA P P P P P PPPPP
Sbjct: 732 PPPPPPAVIVP-------TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.045
Identities = 30/120 (25%), Positives = 30/120 (25%), Gaps = 3/120 (2%)
Frame = +1
Query: 511 PPPXXGETXPPXXXXRGLPPTPPRSGEIXPSKXXGXXTPAQKP--FXXPGPXPXGKXXTX 684
P P PP G PP P S P P KP P P P G
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Query: 685 APSXXXXXXQNPPPP-PXXXXXXXXXXXXXXXXXXRXXXKTXPGSPPXXXPPXAPLXPXP 861
PS P P K G PP P AP P P
Sbjct: 1163 KPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 32.3 bits (70), Expect = 0.10
Identities = 31/124 (25%), Positives = 32/124 (25%), Gaps = 3/124 (2%)
Frame = +1
Query: 499 GXPXPPPXXGETXPPXXXXRGLPPTPPRSGEIXPSKXXGXXTPAQKP--FXXPGPXPXGK 672
G P P P P PP P S + P P KP P P P G
Sbjct: 1081 GAP-PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGA 1139
Query: 673 XXTXAPSXXXXXXQNPP-PPPXXXXXXXXXXXXXXXXXXRXXXKTXPGSPPXXXPPXAPL 849
PS P PP K G PP P AP
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 850 XPXP 861
P P
Sbjct: 1200 VPKP 1203
Score = 30.3 bits (65), Expect = 0.42
Identities = 24/81 (29%), Positives = 24/81 (29%), Gaps = 5/81 (6%)
Frame = +1
Query: 505 PXPPPXXGETXPPXXXXRGLPPTPPRSGEIXPSKXXGXXTPAQKP--FXXPGPXPXGKXX 678
P P P P G PP P SG K P KP P P P G
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Query: 679 TXAPSXXXXXXQNP---PPPP 732
PS P PP P
Sbjct: 1123 VPKPSVAAPPVPVPSGAPPVP 1143
Score = 29.9 bits (64), Expect = 0.56
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +3
Query: 720 PPPPXXXPPEXXPSXXPRGAXXXXXXKNXPGLPPXXXPPXGPPXPPPPXG 869
P P PP PS P K G+PP P PP P P G
Sbjct: 1182 PKPAAGVPPVPPPSEAP------PVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
Score = 29.5 bits (63), Expect = 0.74
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = +3
Query: 726 PPXXXPPEXXPSXXPRGAXXXXXXKNXPGLPPXXXPPXGPPXPPPPXG 869
PP P P + K G+PP P PP P P G
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVG 1206
Score = 29.1 bits (62), Expect = 0.97
Identities = 28/117 (23%), Positives = 31/117 (26%)
Frame = +1
Query: 511 PPPXXGETXPPXXXXRGLPPTPPRSGEIXPSKXXGXXTPAQKPFXXPGPXPXGKXXTXAP 690
PP T PP PP P+S PS PA P P G AP
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPV-PKSSSGAPSAP--PPVPAPSSEIPSIPAPSGAPPVPAP 1088
Query: 691 SXXXXXXQNPPPPPXXXXXXXXXXXXXXXXXXRXXXKTXPGSPPXXXPPXAPLXPXP 861
S + P K +PP P AP P P
Sbjct: 1089 SGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/76 (22%), Positives = 21/76 (27%)
Frame = +1
Query: 499 GXPXPPPXXGETXPPXXXXRGLPPTPPRSGEIXPSKXXGXXTPAQKPFXXPGPXPXGKXX 678
G P P P G+PP P + + P P KP P P
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
Query: 679 TXAPSXXXXXXQNPPP 726
P+ P P
Sbjct: 1217 PPVPTPSAGLPPVPVP 1232
Score = 26.2 bits (55), Expect = 6.9
Identities = 16/55 (29%), Positives = 18/55 (32%), Gaps = 4/55 (7%)
Frame = +3
Query: 717 PPPPPXXXPPEXXPSXX----PRGAXXXXXXKNXPGLPPXXXPPXGPPXPPPPXG 869
P P P PP PS P+ + G PP P P P P G
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG 1138
Score = 25.8 bits (54), Expect = 9.1
Identities = 15/50 (30%), Positives = 16/50 (32%), Gaps = 4/50 (8%)
Frame = +3
Query: 723 PPPXXXPPEXXPSXXPR----GAXXXXXXKNXPGLPPXXXPPXGPPXPPP 860
P P PP PS P K +PP P PP P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 31.5 bits (68), Expect = 0.18
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +3
Query: 711 TKPPPPPXXXPPEXXPSXXPRGAXXXXXXKNXPGLPPXXXPPXGPPXPPP 860
T PPPPP P + G+ P PP PP PPP
Sbjct: 906 TPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPP--PPPPPP 953
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.3 bits (65), Expect = 0.42
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 807 PGLPPXXXPPXGPPXPPPP 863
P PP PP PP PPPP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 5/30 (16%)
Frame = +3
Query: 807 PGLPPXXXPPXG-----PPXPPPPXGXXXK 881
PG PP PP G P PPPP G K
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPGYVKK 35
Score = 27.9 bits (59), Expect = 2.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 831 PPXGPPXPPPPXG 869
PP PP PPPP G
Sbjct: 5 PPGNPPPPPPPPG 17
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 717 PPPPPXXXPPEXXPSXXPRG 776
PPPPP PP P P G
Sbjct: 12 PPPPPGFEPPSQPPPPPPPG 31
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.97
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +3
Query: 717 PPPPPXXXPPEXXPSXXPRGAXXXXXXKNXPGLPPXXXPPXGPPXPPPP 863
PPPPP PP PS P A P PP P P P P
Sbjct: 1707 PPPPPMSVPP--PPSAPPMPA-------GPPSAPPPPLPASSAPSVPNP 1746
Score = 26.6 bits (56), Expect = 5.2
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = +1
Query: 484 GGFFXGXPXP-PPXXGETXPPXXXXRGLPPTPPRSGEIXPSKXXGXXTPAQKPFXXPGPX 660
GG P PP ++ P PP PP S PS PA P P P
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPS---APPMPAGPPSAPPPPL 1735
Query: 661 P 663
P
Sbjct: 1736 P 1736
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
Frame = -3
Query: 820 GGSPGXFXGXXGG--GAP--LGXXEGXXSGGXXXGGGG 719
GG PG F G GG G P G G GG GGG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 820 GGSPGXFXGXXGGGAPLGXXEGXXSG 743
GG+PG G GGAP G G +G
Sbjct: 612 GGAPGGAPGGMPGGAPGGAPGGADNG 637
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 717 PPPPPXXXPPEXXPSXXPRGA 779
PPPPP P PS P A
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSA 1903
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.144 0.493
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,710,876
Number of Sequences: 5004
Number of extensions: 22111
Number of successful extensions: 134
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 491307756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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