Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_L24
         (887 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles ...   259   7e-71
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           25   3.1  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           25   3.1  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           25   3.1  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           25   3.1  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           25   3.1  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    25   3.1  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.4  

>U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S13 mRNA, complete
           cds. ).
          Length = 151

 Score =  259 bits (635), Expect = 7e-71
 Identities = 121/150 (80%), Positives = 137/150 (91%)
 Frame = +3

Query: 114 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 293
           MGRMHAPGKGIS+SALPYRRSVP+WLKL+A+DVKEQI KLGKKG+TPSQIG++LRDSHGV
Sbjct: 1   MGRMHAPGKGISKSALPYRRSVPSWLKLSAEDVKEQIKKLGKKGMTPSQIGIILRDSHGV 60

Query: 294 AQVXFVTGKKILRIMKAMGLAPDLPEDLYYLIXKAVAMRKHLERXRKNKDSXXXLILVES 473
           AQV FV G K+LRIMKA+GL PD+PEDLY+LI KAV++RKHLER RK+ DS   LIL+ES
Sbjct: 61  AQVRFVNGNKVLRIMKAVGLKPDIPEDLYFLIKKAVSIRKHLERNRKDIDSKFRLILIES 120

Query: 474 XIHRLARYYKTKSVLPPNWKYESSTASALV 563
            IHRLARYYK K+VLPPNWKYESSTASALV
Sbjct: 121 RIHRLARYYKIKAVLPPNWKYESSTASALV 150


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +2

Query: 218 TNLQTWKEGSHSLTNWCNAEGFTWSCPSXIRNWQKDPP 331
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +2

Query: 218 TNLQTWKEGSHSLTNWCNAEGFTWSCPSXIRNWQKDPP 331
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +2

Query: 218 TNLQTWKEGSHSLTNWCNAEGFTWSCPSXIRNWQKDPP 331
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +2

Query: 218 TNLQTWKEGSHSLTNWCNAEGFTWSCPSXIRNWQKDPP 331
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 141 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +2

Query: 218 TNLQTWKEGSHSLTNWCNAEGFTWSCPSXIRNWQKDPP 331
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 141 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +2

Query: 218 TNLQTWKEGSHSLTNWCNAEGFTWSCPSXIRNWQKDPP 331
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 142 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 179


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 55   SFWILLLSLSDRRFSKKP--QTWVVCTLLVRVSPSRRCL 165
            SFW  L+SL D +  ++P  QT     LL RVS  + C+
Sbjct: 986  SFW--LVSLEDHQQFQRPEQQTLKAGNLLSRVSRCQVCI 1022


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,630
Number of Sequences: 2352
Number of extensions: 12082
Number of successful extensions: 40
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)