Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_L24
         (887 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X79239-1|CAA55821.1|  151|Homo sapiens ribosomal protein S13 pro...   272   8e-73
L01124-1|AAA60283.1|  151|Homo sapiens ribosomal protein S13 pro...   272   8e-73
D88010-1|BAA13528.1|  151|Homo sapiens ribosomal protein S13 pro...   272   8e-73
BC100032-1|AAI00033.1|  151|Homo sapiens ribosomal protein S13 p...   272   8e-73
BC066322-1|AAH66322.1|  151|Homo sapiens ribosomal protein S13 p...   272   8e-73
BC029732-1|AAH29732.1|  151|Homo sapiens ribosomal protein S13 p...   272   8e-73
BC006772-1|AAH06772.1|  151|Homo sapiens ribosomal protein S13 p...   272   8e-73
BC000475-1|AAH00475.1|  151|Homo sapiens ribosomal protein S13 p...   272   8e-73
L05090-1|AAC15854.1|  116|Homo sapiens ribosomal protein S13 pro...   198   2e-50

>X79239-1|CAA55821.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  272 bits (668), Expect = 8e-73
 Identities = 129/150 (86%), Positives = 139/150 (92%)
 Frame = +3

Query: 114 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 293
           MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1   MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60

Query: 294 AQVXFVTGKKILRIMKAMGLAPDLPEDLYYLIXKAVAMRKHLERXRKNKDSXXXLILVES 473
           AQV FVTG KILRI+K+ GLAPDLPEDLY+LI KAVA+RKHLER RK+KD+   LIL+ES
Sbjct: 61  AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120

Query: 474 XIHRLARYYKTKSVLPPNWKYESSTASALV 563
            IHRLARYYKTK VLPPNWKYESSTASALV
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYESSTASALV 150


>L01124-1|AAA60283.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  272 bits (668), Expect = 8e-73
 Identities = 129/150 (86%), Positives = 139/150 (92%)
 Frame = +3

Query: 114 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 293
           MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1   MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60

Query: 294 AQVXFVTGKKILRIMKAMGLAPDLPEDLYYLIXKAVAMRKHLERXRKNKDSXXXLILVES 473
           AQV FVTG KILRI+K+ GLAPDLPEDLY+LI KAVA+RKHLER RK+KD+   LIL+ES
Sbjct: 61  AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120

Query: 474 XIHRLARYYKTKSVLPPNWKYESSTASALV 563
            IHRLARYYKTK VLPPNWKYESSTASALV
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYESSTASALV 150


>D88010-1|BAA13528.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  272 bits (668), Expect = 8e-73
 Identities = 129/150 (86%), Positives = 139/150 (92%)
 Frame = +3

Query: 114 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 293
           MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1   MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60

Query: 294 AQVXFVTGKKILRIMKAMGLAPDLPEDLYYLIXKAVAMRKHLERXRKNKDSXXXLILVES 473
           AQV FVTG KILRI+K+ GLAPDLPEDLY+LI KAVA+RKHLER RK+KD+   LIL+ES
Sbjct: 61  AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120

Query: 474 XIHRLARYYKTKSVLPPNWKYESSTASALV 563
            IHRLARYYKTK VLPPNWKYESSTASALV
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYESSTASALV 150


>BC100032-1|AAI00033.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  272 bits (668), Expect = 8e-73
 Identities = 129/150 (86%), Positives = 139/150 (92%)
 Frame = +3

Query: 114 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 293
           MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1   MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60

Query: 294 AQVXFVTGKKILRIMKAMGLAPDLPEDLYYLIXKAVAMRKHLERXRKNKDSXXXLILVES 473
           AQV FVTG KILRI+K+ GLAPDLPEDLY+LI KAVA+RKHLER RK+KD+   LIL+ES
Sbjct: 61  AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120

Query: 474 XIHRLARYYKTKSVLPPNWKYESSTASALV 563
            IHRLARYYKTK VLPPNWKYESSTASALV
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYESSTASALV 150


>BC066322-1|AAH66322.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  272 bits (668), Expect = 8e-73
 Identities = 129/150 (86%), Positives = 139/150 (92%)
 Frame = +3

Query: 114 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 293
           MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1   MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60

Query: 294 AQVXFVTGKKILRIMKAMGLAPDLPEDLYYLIXKAVAMRKHLERXRKNKDSXXXLILVES 473
           AQV FVTG KILRI+K+ GLAPDLPEDLY+LI KAVA+RKHLER RK+KD+   LIL+ES
Sbjct: 61  AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120

Query: 474 XIHRLARYYKTKSVLPPNWKYESSTASALV 563
            IHRLARYYKTK VLPPNWKYESSTASALV
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYESSTASALV 150


>BC029732-1|AAH29732.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  272 bits (668), Expect = 8e-73
 Identities = 129/150 (86%), Positives = 139/150 (92%)
 Frame = +3

Query: 114 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 293
           MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1   MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60

Query: 294 AQVXFVTGKKILRIMKAMGLAPDLPEDLYYLIXKAVAMRKHLERXRKNKDSXXXLILVES 473
           AQV FVTG KILRI+K+ GLAPDLPEDLY+LI KAVA+RKHLER RK+KD+   LIL+ES
Sbjct: 61  AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120

Query: 474 XIHRLARYYKTKSVLPPNWKYESSTASALV 563
            IHRLARYYKTK VLPPNWKYESSTASALV
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYESSTASALV 150


>BC006772-1|AAH06772.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  272 bits (668), Expect = 8e-73
 Identities = 129/150 (86%), Positives = 139/150 (92%)
 Frame = +3

Query: 114 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 293
           MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1   MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60

Query: 294 AQVXFVTGKKILRIMKAMGLAPDLPEDLYYLIXKAVAMRKHLERXRKNKDSXXXLILVES 473
           AQV FVTG KILRI+K+ GLAPDLPEDLY+LI KAVA+RKHLER RK+KD+   LIL+ES
Sbjct: 61  AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120

Query: 474 XIHRLARYYKTKSVLPPNWKYESSTASALV 563
            IHRLARYYKTK VLPPNWKYESSTASALV
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYESSTASALV 150


>BC000475-1|AAH00475.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  272 bits (668), Expect = 8e-73
 Identities = 129/150 (86%), Positives = 139/150 (92%)
 Frame = +3

Query: 114 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 293
           MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1   MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60

Query: 294 AQVXFVTGKKILRIMKAMGLAPDLPEDLYYLIXKAVAMRKHLERXRKNKDSXXXLILVES 473
           AQV FVTG KILRI+K+ GLAPDLPEDLY+LI KAVA+RKHLER RK+KD+   LIL+ES
Sbjct: 61  AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120

Query: 474 XIHRLARYYKTKSVLPPNWKYESSTASALV 563
            IHRLARYYKTK VLPPNWKYESSTASALV
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYESSTASALV 150


>L05090-1|AAC15854.1|  116|Homo sapiens ribosomal protein S13
           protein.
          Length = 116

 Score =  198 bits (484), Expect = 2e-50
 Identities = 96/116 (82%), Positives = 105/116 (90%)
 Frame = +3

Query: 147 SQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVXFVTGKKI 326
           SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQV FVTG KI
Sbjct: 1   SQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKI 60

Query: 327 LRIMKAMGLAPDLPEDLYYLIXKAVAMRKHLERXRKNKDSXXXLILVESXIHRLAR 494
           LRI+K+ GLA DLPEDLY+LI KAVA+RKHLER RK+KD+   LIL+ES IHRLAR
Sbjct: 61  LRILKSKGLASDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLAR 116


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,284,528
Number of Sequences: 237096
Number of extensions: 1903734
Number of successful extensions: 3696
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3696
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)