Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_L24
         (887 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91854-1|CAA62965.1|  151|Drosophila melanogaster ribosomal prot...   265   6e-71
X91853-1|CAA62964.1|  151|Drosophila melanogaster ribosomal prot...   265   6e-71
AY058536-1|AAL13765.1|  151|Drosophila melanogaster LD23958p pro...   265   6e-71
AE014134-1471|ABC65883.1|  151|Drosophila melanogaster CG13389-P...   265   6e-71
AE014134-1470|AAF52649.1|  151|Drosophila melanogaster CG13389-P...   265   6e-71
Z19052-1|CAA79496.1|  151|Drosophila melanogaster ribosomal prot...   251   1e-66

>X91854-1|CAA62965.1|  151|Drosophila melanogaster ribosomal protein
           S13 protein.
          Length = 151

 Score =  265 bits (649), Expect = 6e-71
 Identities = 125/150 (83%), Positives = 137/150 (91%)
 Frame = +3

Query: 114 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 293
           MGRMHAPGKGISQSALPYRR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGV
Sbjct: 1   MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGV 60

Query: 294 AQVXFVTGKKILRIMKAMGLAPDLPEDLYYLIXKAVAMRKHLERXRKNKDSXXXLILVES 473
           AQV FV G KILRIMK++GL PD+PEDLY++I KAVA+RKHLER RK+KD    LILVES
Sbjct: 61  AQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVES 120

Query: 474 XIHRLARYYKTKSVLPPNWKYESSTASALV 563
            IHRLARYYKTKSVLPPNWKYESSTASALV
Sbjct: 121 RIHRLARYYKTKSVLPPNWKYESSTASALV 150


>X91853-1|CAA62964.1|  151|Drosophila melanogaster ribosomal protein
           S13 protein.
          Length = 151

 Score =  265 bits (649), Expect = 6e-71
 Identities = 125/150 (83%), Positives = 137/150 (91%)
 Frame = +3

Query: 114 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 293
           MGRMHAPGKGISQSALPYRR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGV
Sbjct: 1   MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGV 60

Query: 294 AQVXFVTGKKILRIMKAMGLAPDLPEDLYYLIXKAVAMRKHLERXRKNKDSXXXLILVES 473
           AQV FV G KILRIMK++GL PD+PEDLY++I KAVA+RKHLER RK+KD    LILVES
Sbjct: 61  AQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVES 120

Query: 474 XIHRLARYYKTKSVLPPNWKYESSTASALV 563
            IHRLARYYKTKSVLPPNWKYESSTASALV
Sbjct: 121 RIHRLARYYKTKSVLPPNWKYESSTASALV 150


>AY058536-1|AAL13765.1|  151|Drosophila melanogaster LD23958p
           protein.
          Length = 151

 Score =  265 bits (649), Expect = 6e-71
 Identities = 125/150 (83%), Positives = 137/150 (91%)
 Frame = +3

Query: 114 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 293
           MGRMHAPGKGISQSALPYRR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGV
Sbjct: 1   MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGV 60

Query: 294 AQVXFVTGKKILRIMKAMGLAPDLPEDLYYLIXKAVAMRKHLERXRKNKDSXXXLILVES 473
           AQV FV G KILRIMK++GL PD+PEDLY++I KAVA+RKHLER RK+KD    LILVES
Sbjct: 61  AQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVES 120

Query: 474 XIHRLARYYKTKSVLPPNWKYESSTASALV 563
            IHRLARYYKTKSVLPPNWKYESSTASALV
Sbjct: 121 RIHRLARYYKTKSVLPPNWKYESSTASALV 150


>AE014134-1471|ABC65883.1|  151|Drosophila melanogaster CG13389-PB,
           isoform B protein.
          Length = 151

 Score =  265 bits (649), Expect = 6e-71
 Identities = 125/150 (83%), Positives = 137/150 (91%)
 Frame = +3

Query: 114 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 293
           MGRMHAPGKGISQSALPYRR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGV
Sbjct: 1   MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGV 60

Query: 294 AQVXFVTGKKILRIMKAMGLAPDLPEDLYYLIXKAVAMRKHLERXRKNKDSXXXLILVES 473
           AQV FV G KILRIMK++GL PD+PEDLY++I KAVA+RKHLER RK+KD    LILVES
Sbjct: 61  AQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVES 120

Query: 474 XIHRLARYYKTKSVLPPNWKYESSTASALV 563
            IHRLARYYKTKSVLPPNWKYESSTASALV
Sbjct: 121 RIHRLARYYKTKSVLPPNWKYESSTASALV 150


>AE014134-1470|AAF52649.1|  151|Drosophila melanogaster CG13389-PA,
           isoform A protein.
          Length = 151

 Score =  265 bits (649), Expect = 6e-71
 Identities = 125/150 (83%), Positives = 137/150 (91%)
 Frame = +3

Query: 114 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 293
           MGRMHAPGKGISQSALPYRR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGV
Sbjct: 1   MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGV 60

Query: 294 AQVXFVTGKKILRIMKAMGLAPDLPEDLYYLIXKAVAMRKHLERXRKNKDSXXXLILVES 473
           AQV FV G KILRIMK++GL PD+PEDLY++I KAVA+RKHLER RK+KD    LILVES
Sbjct: 61  AQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVES 120

Query: 474 XIHRLARYYKTKSVLPPNWKYESSTASALV 563
            IHRLARYYKTKSVLPPNWKYESSTASALV
Sbjct: 121 RIHRLARYYKTKSVLPPNWKYESSTASALV 150


>Z19052-1|CAA79496.1|  151|Drosophila melanogaster ribosomal protein
           S17 protein.
          Length = 151

 Score =  251 bits (614), Expect = 1e-66
 Identities = 119/150 (79%), Positives = 132/150 (88%)
 Frame = +3

Query: 114 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 293
           MGRMHAPGKGISQSALPYRR+VP+WLKL ADDVKEQI K G++G    QIG++LRDSHGV
Sbjct: 1   MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKAGQEGSDSLQIGIILRDSHGV 60

Query: 294 AQVXFVTGKKILRIMKAMGLAPDLPEDLYYLIXKAVAMRKHLERXRKNKDSXXXLILVES 473
           AQV FV G KILRIMK++GL PD+PEDLY++I KAVA+RKHLER RK+KD    LILVES
Sbjct: 61  AQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVES 120

Query: 474 XIHRLARYYKTKSVLPPNWKYESSTASALV 563
            IHRLARYYKTKSVLPPNWKYESSTASALV
Sbjct: 121 RIHRLARYYKTKSVLPPNWKYESSTASALV 150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,394,742
Number of Sequences: 53049
Number of extensions: 538223
Number of successful extensions: 1060
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)