Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_L21
(893 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 113 4e-26
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 88 1e-18
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 86 7e-18
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 85 1e-17
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 80 5e-16
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 77 3e-15
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 74 3e-14
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 72 1e-13
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 66 6e-12
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 66 6e-12
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 64 3e-11
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 62 8e-11
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 43 5e-05
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 36 0.008
SPCC550.05 |nse1||Smc5-6 complex non-SMC subunit 1|Schizosacchar... 29 0.89
SPAC6C3.04 |cit1||citrate synthase|Schizosaccharomyces pombe|chr... 26 6.3
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 6.3
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 26 8.3
SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizo... 26 8.3
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 26 8.3
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 113 bits (271), Expect = 4e-26
Identities = 47/76 (61%), Positives = 61/76 (80%)
Frame = +1
Query: 406 TVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTV 585
T Y G K+K+S+ FP +YPY+PP + F +P +HPNVD G ICLDILKDKW+A+Y+V+T+
Sbjct: 71 TYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTI 130
Query: 586 LLSIQSLLAEPNTQSP 633
LLS+QSLL EPN SP
Sbjct: 131 LLSLQSLLGEPNNASP 146
Score = 60.9 bits (141), Expect = 2e-10
Identities = 34/68 (50%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +3
Query: 198 QNINPHYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMRCSDKGISAFPESE-NLFK 374
QN NPH S K S D H+V+KRL+ ELM LM + GISAFP+S+ NL
Sbjct: 6 QNQNPHTNS-----KNSSSAGMAVDGHSVTKRLRSELMSLMMSNTPGISAFPDSDSNLLH 60
Query: 375 WIGTINGP 398
W GTI GP
Sbjct: 61 WAGTITGP 68
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 88.2 bits (209), Expect = 1e-18
Identities = 38/77 (49%), Positives = 50/77 (64%)
Frame = +1
Query: 412 YAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLL 591
YAG + LS+ FP YP+ PP V F T +HPN+++ G ICLDIL+D+W+ + VLL
Sbjct: 45 YAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLL 104
Query: 592 SIQSLLAEPNTQSPFKP 642
SI SLL +PN P P
Sbjct: 105 SICSLLTDPNPDDPLVP 121
Score = 33.5 bits (73), Expect = 0.041
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 288 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLEN 407
KR+ +EL +L + SA P ++LF W TI GP ++
Sbjct: 4 KRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADS 43
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 85.8 bits (203), Expect = 7e-18
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = +1
Query: 403 KTVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRT 582
++ Y G K+ L L P+ YP PP V+F+T +HPNVD G ICL LK W+ +RT
Sbjct: 43 QSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRT 102
Query: 583 VLLSIQSLLAEPNTQSP 633
VLLSIQ+L+ PN P
Sbjct: 103 VLLSIQALMGAPNPDDP 119
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 279 AVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLEN 407
A+ KR+ KE+ L R GI A P +NL + T+ GP ++
Sbjct: 2 ALPKRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQS 44
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 85.4 bits (202), Expect = 1e-17
Identities = 38/76 (50%), Positives = 50/76 (65%)
Frame = +1
Query: 406 TVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTV 585
T + +KL L F YP PP+VKF++ FHPNV G +CLDIL+++W+ YDV +
Sbjct: 46 TPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAI 105
Query: 586 LLSIQSLLAEPNTQSP 633
L SIQSLL +PN SP
Sbjct: 106 LTSIQSLLNDPNNASP 121
Score = 30.3 bits (65), Expect = 0.39
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 288 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLE 404
+RL ++ + + G+SA P S+N+ W I GP +
Sbjct: 7 RRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPAD 45
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 79.8 bits (188), Expect = 5e-16
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = +1
Query: 406 TVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDT-CGLICLDILKDKWTALYDVRT 582
T Y G + + +E P YP+ PP + F T +HPNV + G ICLDILKD+W+ +Y +++
Sbjct: 46 TPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKS 105
Query: 583 VLLSIQSLLAEPNTQSP 633
L+S+QSLL P +P
Sbjct: 106 ALISLQSLLCTPEPSNP 122
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 77.0 bits (181), Expect = 3e-15
Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +1
Query: 403 KTVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDK--WTALYDV 576
KT + G YKL++ FP YP PP +F P FHPNV G +CL IL ++ W +
Sbjct: 50 KTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITI 109
Query: 577 RTVLLSIQSLLAEPNTQSP 633
+ +LL IQ LL +PN SP
Sbjct: 110 KQILLGIQDLLDDPNIASP 128
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 73.7 bits (173), Expect = 3e-14
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +1
Query: 406 TVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDK-WTALYDVRT 582
+VYAG K+ SL+FP YP+ PP ++F T +HPN D+ G +CL ILK + + +R+
Sbjct: 49 SVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRS 108
Query: 583 VLLSIQSLLAEPNTQSP 633
VL I LL EPN P
Sbjct: 109 VLEQILQLLREPNPDDP 125
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 71.7 bits (168), Expect = 1e-13
Identities = 26/74 (35%), Positives = 46/74 (62%)
Frame = +1
Query: 412 YAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLL 591
Y G K+K ++ ++YP+ PP VK + +HPN+D G +CL+IL+ W + ++ ++L+
Sbjct: 65 YKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILV 124
Query: 592 SIQSLLAEPNTQSP 633
+Q L PN + P
Sbjct: 125 GLQFLFLSPNAEDP 138
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 66.1 bits (154), Expect = 6e-12
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Frame = +1
Query: 403 KTVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVD-TCGLICLDILKDKWTALYDVR 579
+T Y+G +K+ +E P+ YP+ P + F+ FHPN+D G +CLD++ W+ ++D+
Sbjct: 41 ETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMI 100
Query: 580 TVL-LSIQSLLAEPNTQSPFK-PASIISMAEPS 672
+ + + LL PN P A+ + + EP+
Sbjct: 101 NIFEVFLPQLLRYPNASDPLNGEAAALLLREPN 133
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 66.1 bits (154), Expect = 6e-12
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 13/88 (14%)
Frame = +1
Query: 406 TVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDIL------------- 546
T + G Y +L+FP+ YP PP +KF FHPNV G +C+ IL
Sbjct: 48 TPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESS 107
Query: 547 KDKWTALYDVRTVLLSIQSLLAEPNTQS 630
++W+ + V +LLS+ S+LAEPN +S
Sbjct: 108 SERWSPVQSVEKILLSVMSMLAEPNDES 135
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 63.7 bits (148), Expect = 3e-11
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Frame = +1
Query: 406 TVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILK------------ 549
T+Y G + +L FP YP PP +KF T +HPNV G +C+ IL
Sbjct: 48 TLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDA 107
Query: 550 -DKWTALYDVRTVLLSIQSLLAEPNTQSP 633
++W ++ T+L+S+ S+L+ PN +SP
Sbjct: 108 GERWLPVHSPETILISVISMLSSPNDESP 136
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 62.5 bits (145), Expect = 8e-11
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +1
Query: 403 KTVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVD-TCGLICLDILKDKWTALYDVR 579
+T Y G ++ L + YP +PP V F T HPN+ T G +C+DILK W+ + ++
Sbjct: 46 ETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQ 105
Query: 580 TVLLSIQSLLAEPNTQSP 633
+ L+I SLL+ + SP
Sbjct: 106 SACLAIISLLSNYDASSP 123
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 43.2 bits (97), Expect = 5e-05
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 406 TVYAGHKYKLSLEFPNSYPYAPPVVKFMTPC--FHPNVDTCGLICLDILKDKWTALYDVR 579
T Y G +Y +L FP YP+ PP ++ +TP F N C L D W + V
Sbjct: 47 TPYEGGQYHGTLIFPPDYPFKPPAIRMITPSGRFQTNTRLC-LSFSDFHPKSWNPSWMVS 105
Query: 580 TVLLSIQSLL 609
T+L+ + S +
Sbjct: 106 TILVGLVSFM 115
Score = 30.7 bits (66), Expect = 0.29
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 288 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGP 398
KRL KE + L + + + A P +EN+ +W I GP
Sbjct: 8 KRLMKEYLALQKNPVELVDAKPATENILEWHYIITGP 44
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 35.9 bits (79), Expect = 0.008
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +1
Query: 406 TVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVD-TCGLI---CLDILKDKWTALYD 573
+V+ Y L + +YP APP+V F++ P VD G + +D L+ W Y
Sbjct: 51 SVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKVNPHKIDCLR-HWKREYS 109
Query: 574 VRTVLLSIQSLLAEPNTQSPFKP 642
+ TVLL ++ +A + + +P
Sbjct: 110 METVLLDLKKEMASSSNRKLPQP 132
>SPCC550.05 |nse1||Smc5-6 complex non-SMC subunit
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 232
Score = 29.1 bits (62), Expect = 0.89
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 336 LYHCTALAPLALSGVVCSQHDCLLV*SCLHSA 241
LY C A + ++G VC CL V C H A
Sbjct: 181 LYECNACREIVIAGYVCDCGYCLHVYCCKHLA 212
>SPAC6C3.04 |cit1||citrate synthase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 473
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 365 PLQMDRDHQWTFRKLYTQATNTNY 436
P+QMD+DH + F + A N +
Sbjct: 237 PIQMDKDHSYNFANVLGFANNEEF 260
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 198 QNINPHYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMR 323
QNI+ ++ + S K SED KL +N +V + + + ++
Sbjct: 920 QNISTNHTNDSAALKSSEDHSKLANNFSVPDSIDHKFYQQVK 961
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 219 ASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMRCSDKGISA 347
+ + N + S K++HA K+LQKE + +D + A
Sbjct: 91 SEAENDEESSSQKSNSKESHAQRKKLQKERKAMKPFADTSLKA 133
>SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase
Ubp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 457
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 430 KLSLEFPNSYPYAPPVVKFMTPCFHPNV 513
KLS+E+ N P AP +V CF +V
Sbjct: 112 KLSMEWDNIMPNAPGLVNLGNTCFMNSV 139
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 424 KYKLSLEFPNSYPYAPPVVK 483
K L +E SYPY PV+K
Sbjct: 62 KLDLCIELGRSYPYVKPVIK 81
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,491,401
Number of Sequences: 5004
Number of extensions: 71935
Number of successful extensions: 213
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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